RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 C11orf52Q96A22 123 aa10.8□□□□□ -0.68
LINC00563-201ENST00000566370 SEPSECSQ9HD40 501 aaKnown RBP10.8□□□□□ -0.68
LINC00563-201ENST00000566370 DNAJC4Q9NNZ3 241 aa10.8□□□□□ -0.68
LINC00563-201ENST00000566370 MAP1BP46821 2468 aaKnown RBP10.79□□□□□ -0.68
LINC00563-201ENST00000566370 ARFGEF3Q5TH69 2177 aa10.79□□□□□ -0.68
LINC00563-201ENST00000566370 LOC105371242A0A075B767 164 aa10.79□□□□□ -0.68
LINC00563-201ENST00000566370 SIAH2O43255 324 aa10.79□□□□□ -0.68
LINC00563-201ENST00000566370 HTR1DP28221 377 aa10.79□□□□□ -0.68
LINC00563-201ENST00000566370 NDUFA6P56556 154 aa10.79□□□□□ -0.68
LINC00563-201ENST00000566370 DIAPH2-AS1Q14236 149 aa10.79□□□□□ -0.68
LINC00563-201ENST00000566370 C10orf113Q5VZT2 155 aa10.79□□□□□ -0.68
LINC00563-201ENST00000566370 MIR17HGQ75NE6 70 aa10.79□□□□□ -0.68
LINC00563-201ENST00000566370 LINC01551Q86U37 167 aa10.79□□□□□ -0.68
LINC00563-201ENST00000566370 THAP8Q8NA92 274 aa10.79□□□□□ -0.68
LINC00563-201ENST00000566370 LY6G5BQ8NDX9 201 aa10.79□□□□□ -0.68
LINC00563-201ENST00000566370 C1orf159Q96HA4 380 aa10.79□□□□□ -0.68
LINC00563-201ENST00000566370 PYGO2Q9BRQ0 406 aa10.79□□□□□ -0.68
LINC00563-201ENST00000566370 SSBP3Q9BWW4 388 aaPredicted RBP10.79□□□□□ -0.68
LINC00563-201ENST00000566370 TRAV9-1A0A075B6T8 112 aa10.78□□□□□ -0.68
LINC00563-201ENST00000566370 A0A1W2PRE2 83 aa10.78□□□□□ -0.68
LINC00563-201ENST00000566370 TRGC2P03986 189 aa10.78□□□□□ -0.68
LINC00563-201ENST00000566370 PFN1P07737 140 aaKnown RBP10.78□□□□□ -0.68
LINC00563-201ENST00000566370 S100A12P80511 92 aa10.78□□□□□ -0.68
LINC00563-201ENST00000566370 PAX2Q02962 417 aa10.78□□□□□ -0.68
LINC00563-201ENST00000566370 WT1-ASQ06250 92 aa10.78□□□□□ -0.68
LINC00563-201ENST00000566370 C11orf71Q6IPW1 123 aa10.78□□□□□ -0.68
LINC00563-201ENST00000566370 CCDC144NLQ6NUI1 221 aa10.78□□□□□ -0.68
LINC00563-201ENST00000566370 DTX2Q86UW9 622 aa10.78□□□□□ -0.68
LINC00563-201ENST00000566370 PPP1R27Q86WC6 154 aa10.78□□□□□ -0.68
LINC00563-201ENST00000566370 KIR3DL3Q8N743 410 aa10.78□□□□□ -0.68
LINC00563-201ENST00000566370 OR5T1Q8NG75 326 aa10.78□□□□□ -0.68
LINC00563-201ENST00000566370 OR51G1Q8NGK1 321 aa10.78□□□□□ -0.68
LINC00563-201ENST00000566370 OR1P1Q8NH06 330 aa10.78□□□□□ -0.68
LINC00563-201ENST00000566370 MISP3Q96FF7 219 aa10.78□□□□□ -0.68
LINC00563-201ENST00000566370 PERPQ96FX8 193 aa10.78□□□□□ -0.68
LINC00563-201ENST00000566370 DPM3Q9P2X0 92 aa10.78□□□□□ -0.68
LINC00563-201ENST00000566370 SIGLEC9Q9Y336 463 aa10.78□□□□□ -0.68
LINC00563-201ENST00000566370 IGHV3-72A0A0B4J1Y9 119 aa10.77□□□□□ -0.68
LINC00563-201ENST00000566370 SCO2A0A1W2PP80 73 aa10.77□□□□□ -0.68
LINC00563-201ENST00000566370 A0A1W2PPI3 338 aa10.77□□□□□ -0.68
LINC00563-201ENST00000566370 A0A1W2PPQ1 181 aa10.77□□□□□ -0.68
LINC00563-201ENST00000566370 OOSP1A8MZH6 123 aa10.77□□□□□ -0.68
LINC00563-201ENST00000566370 GGCTO75223 188 aaKnown RBP10.77□□□□□ -0.68
LINC00563-201ENST00000566370 HOXA5P20719 270 aa10.77□□□□□ -0.68
LINC00563-201ENST00000566370 GPR6P46095 362 aaPredicted RBP10.77□□□□□ -0.68
LINC00563-201ENST00000566370 CDX1P47902 265 aaPredicted RBP10.77□□□□□ -0.68
LINC00563-201ENST00000566370 UBE2L3P68036 154 aaKnown RBP10.77□□□□□ -0.68
LINC00563-201ENST00000566370 C4orf17Q53FE4 359 aa10.77□□□□□ -0.68
LINC00563-201ENST00000566370 TPTE2P1Q5T6R2 138 aa10.77□□□□□ -0.68
LINC00563-201ENST00000566370 SPATA31B1PQ5VZV4 182 aa10.77□□□□□ -0.68
LINC00563-201ENST00000566370 UNQ6494/PRO21346Q6UXR6 183 aa10.77□□□□□ -0.68
LINC00563-201ENST00000566370 NECAP1Q8NC96 275 aa10.77□□□□□ -0.68
LINC00563-201ENST00000566370 OR11H6Q8NGC7 330 aa10.77□□□□□ -0.68
LINC00563-201ENST00000566370 OR4X1Q8NH49 305 aa10.77□□□□□ -0.68
LINC00563-201ENST00000566370 TMEM190Q8WZ59 177 aa10.77□□□□□ -0.68
LINC00563-201ENST00000566370 SFRP2Q96HF1 295 aa10.77□□□□□ -0.68
LINC00563-201ENST00000566370 SLC25A33Q9BSK2 321 aa10.77□□□□□ -0.68
LINC00563-201ENST00000566370 PRORYQ9H606 182 aa10.77□□□□□ -0.68
LINC00563-201ENST00000566370 YTHDF2Q9Y5A9 579 aaKnown RBP10.77□□□□□ -0.68
LINC00563-201ENST00000566370 DMXL1Q9Y485 3027 aa10.77□□□□□ -0.69
LINC00563-201ENST00000566370 TIGITQ495A1 244 aa10.76□□□□□ -0.69
LINC00563-201ENST00000566370 C10orf55Q5SWW7 151 aa10.76□□□□□ -0.69
LINC00563-201ENST00000566370 C1orf122Q6ZSJ8 110 aa10.76□□□□□ -0.69
LINC00563-201ENST00000566370 S100A7AQ86SG5 101 aa10.76□□□□□ -0.69
LINC00563-201ENST00000566370 OR10G8Q8NGN5 311 aa10.76□□□□□ -0.69
LINC00563-201ENST00000566370 OR2T6Q8NHC8 308 aa10.76□□□□□ -0.69
LINC00563-201ENST00000566370 NPIPB3Q92617 1050 aa10.76□□□□□ -0.69
LINC00563-201ENST00000566370 TRGV9Q99603 122 aa10.76□□□□□ -0.69
LINC00563-201ENST00000566370 PCNX1Q96RV3 2341 aa10.76□□□□□ -0.69
LINC00563-201ENST00000566370 IGLC7A0M8Q6 106 aa10.75□□□□□ -0.69
LINC00563-201ENST00000566370 TMEM8BA6NDV4 472 aa10.75□□□□□ -0.69
LINC00563-201ENST00000566370 HELTA6NFD8 242 aa10.75□□□□□ -0.69
LINC00563-201ENST00000566370 HIST1H2BKO60814 126 aa10.75□□□□□ -0.69
LINC00563-201ENST00000566370 CNIH1O95406 144 aa10.75□□□□□ -0.69
LINC00563-201ENST00000566370 TYMSP04818 313 aa10.75□□□□□ -0.69
LINC00563-201ENST00000566370 HIST1H2BJP06899 126 aa10.75□□□□□ -0.69
LINC00563-201ENST00000566370 CRYGBP07316 175 aa10.75□□□□□ -0.69
LINC00563-201ENST00000566370 HIST1H2BOP23527 126 aa10.75□□□□□ -0.69
LINC00563-201ENST00000566370 NPPCP23582 126 aa10.75□□□□□ -0.69
LINC00563-201ENST00000566370 HIST1H2BBP33778 126 aa10.75□□□□□ -0.69
LINC00563-201ENST00000566370 GNG4P50150 75 aa10.75□□□□□ -0.69
LINC00563-201ENST00000566370 HIST1H2BDP58876 126 aa10.75□□□□□ -0.69
LINC00563-201ENST00000566370 HIST1H2BCP62807 126 aa10.75□□□□□ -0.69
LINC00563-201ENST00000566370 FOXL1Q12952 345 aa10.75□□□□□ -0.69
LINC00563-201ENST00000566370 HIST2H2BEQ16778 126 aa10.75□□□□□ -0.69
LINC00563-201ENST00000566370 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.75□□□□□ -0.69
LINC00563-201ENST00000566370 HIST1H2BHQ93079 126 aa10.75□□□□□ -0.69
LINC00563-201ENST00000566370 FAM122AQ96E09 287 aa10.75□□□□□ -0.69
LINC00563-201ENST00000566370 HIST1H2BNQ99877 126 aa10.75□□□□□ -0.69
LINC00563-201ENST00000566370 HIST1H2BMQ99879 126 aa10.75□□□□□ -0.69
LINC00563-201ENST00000566370 TNFRSF19Q9NS68 423 aa10.75□□□□□ -0.69
LINC00563-201ENST00000566370 GAR1Q9NY12 217 aaKnown RBP10.75□□□□□ -0.69
LINC00563-201ENST00000566370 PITPNC1Q9UKF7 332 aa10.75□□□□□ -0.69
LINC00563-201ENST00000566370 IGKV1OR2-108A0A075B7D4 117 aa10.75□□□□□ -0.69
LINC00563-201ENST00000566370 SCGB2A1O75556 95 aa10.75□□□□□ -0.69
LINC00563-201ENST00000566370 C1QTNF9P0C862 333 aa10.75□□□□□ -0.69
LINC00563-201ENST00000566370 TRGC1P0CF51 173 aa10.75□□□□□ -0.69
LINC00563-201ENST00000566370 PRTN3P24158 256 aa10.75□□□□□ -0.69
LINC00563-201ENST00000566370 LGALS4P56470 323 aa10.75□□□□□ -0.69
LINC00563-201ENST00000566370 PVRIGQ6DKI7 326 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms