RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 CXorf58Q96LI9 332 aa10.33□□□□□ -0.76
VPS9D1-204ENST00000565023 RCHY1Q96PM5 261 aa10.33□□□□□ -0.76
VPS9D1-204ENST00000565023 PRR13Q9NZ81 148 aa10.33□□□□□ -0.76
VPS9D1-204ENST00000565023 THYN1Q9P016 225 aa10.33□□□□□ -0.76
VPS9D1-204ENST00000565023 DYNC2H1Q8NCM8 4307 aaKnown RBP10.32□□□□□ -0.76
VPS9D1-204ENST00000565023 LYRM1O43325 122 aa10.32□□□□□ -0.76
VPS9D1-204ENST00000565023 FOLR2P14207 255 aa10.32□□□□□ -0.76
VPS9D1-204ENST00000565023 UBE2MP61081 183 aaKnown RBP10.32□□□□□ -0.76
VPS9D1-204ENST00000565023 SRPXP78539 464 aa10.32□□□□□ -0.76
VPS9D1-204ENST00000565023 PRCDQ00LT1 54 aa10.32□□□□□ -0.76
VPS9D1-204ENST00000565023 FAM106AQ4KMX7 169 aa10.32□□□□□ -0.76
VPS9D1-204ENST00000565023 SPINK9Q5DT21 86 aa10.32□□□□□ -0.76
VPS9D1-204ENST00000565023 FAM209BQ5JX69 171 aa10.32□□□□□ -0.76
VPS9D1-204ENST00000565023 PLET1Q6UQ28 207 aa10.32□□□□□ -0.76
VPS9D1-204ENST00000565023 Q6ZRM9 215 aa10.32□□□□□ -0.76
VPS9D1-204ENST00000565023 SLC35G3Q8N808 338 aa10.32□□□□□ -0.76
VPS9D1-204ENST00000565023 RNASE11Q8TAA1 199 aaKnown RBP10.32□□□□□ -0.76
VPS9D1-204ENST00000565023 GPR146Q96CH1 333 aa10.32□□□□□ -0.76
VPS9D1-204ENST00000565023 TUBA4BQ9H853 241 aa10.32□□□□□ -0.76
VPS9D1-204ENST00000565023 ZMAT4Q9H898 229 aa10.32□□□□□ -0.76
VPS9D1-204ENST00000565023 PLEKHA3Q9HB20 300 aa10.32□□□□□ -0.76
VPS9D1-204ENST00000565023 SIGLEC8Q9NYZ4 499 aa10.32□□□□□ -0.76
VPS9D1-204ENST00000565023 TRBV7-1A0A0A6YYK4 115 aa10.31□□□□□ -0.76
VPS9D1-204ENST00000565023 A0A0B4J2A0 478 aa10.31□□□□□ -0.76
VPS9D1-204ENST00000565023 PIGBOS1A0A0B4J2F0 54 aa10.31□□□□□ -0.76
VPS9D1-204ENST00000565023 CYB5BO43169 146 aa10.31□□□□□ -0.76
VPS9D1-204ENST00000565023 ST8SIA3O43173 380 aa10.31□□□□□ -0.76
VPS9D1-204ENST00000565023 MFAP2P55001 183 aa10.31□□□□□ -0.76
VPS9D1-204ENST00000565023 CD81P60033 236 aa10.31□□□□□ -0.76
VPS9D1-204ENST00000565023 PPP1R1AQ13522 171 aa10.31□□□□□ -0.76
VPS9D1-204ENST00000565023 LGI3Q8N145 548 aa10.31□□□□□ -0.76
VPS9D1-204ENST00000565023 LRTM2Q8N967 370 aa10.31□□□□□ -0.76
VPS9D1-204ENST00000565023 UBAC2Q8NBM4 344 aa10.31□□□□□ -0.76
VPS9D1-204ENST00000565023 ZNF502Q8TBZ5 544 aa10.31□□□□□ -0.76
VPS9D1-204ENST00000565023 WDR89Q96FK6 387 aaPredicted RBP10.31□□□□□ -0.76
VPS9D1-204ENST00000565023 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.31□□□□□ -0.76
VPS9D1-204ENST00000565023 SHPKQ9UHJ6 478 aa10.31□□□□□ -0.76
VPS9D1-204ENST00000565023 FLVCR2Q9UPI3 526 aa10.31□□□□□ -0.76
VPS9D1-204ENST00000565023 F11RQ9Y624 299 aaKnown RBP10.31□□□□□ -0.76
VPS9D1-204ENST00000565023 OR2T8A6NH00 312 aa10.3□□□□□ -0.76
VPS9D1-204ENST00000565023 INS-IGF2F8WCM5 200 aa10.3□□□□□ -0.76
VPS9D1-204ENST00000565023 UPK1BO75841 260 aa10.3□□□□□ -0.76
VPS9D1-204ENST00000565023 SFT2D2O95562 160 aa10.3□□□□□ -0.76
VPS9D1-204ENST00000565023 CD7P09564 240 aa10.3□□□□□ -0.76
VPS9D1-204ENST00000565023 VAMP1P23763 118 aa10.3□□□□□ -0.76
VPS9D1-204ENST00000565023 DEFB114Q30KQ6 69 aa10.3□□□□□ -0.76
VPS9D1-204ENST00000565023 ANKRD55Q3KP44 614 aa10.3□□□□□ -0.76
VPS9D1-204ENST00000565023 TM4SF20Q53R12 229 aa10.3□□□□□ -0.76
VPS9D1-204ENST00000565023 NMSQ5H8A3 153 aa10.3□□□□□ -0.76
VPS9D1-204ENST00000565023 UNQ9165/PRO28630Q6UXU0 137 aa10.3□□□□□ -0.76
VPS9D1-204ENST00000565023 LYZL2Q7Z4W2 148 aa10.3□□□□□ -0.76
VPS9D1-204ENST00000565023 GPHB5Q86YW7 130 aa10.3□□□□□ -0.76
VPS9D1-204ENST00000565023 OR2C3Q8N628 320 aa10.3□□□□□ -0.76
VPS9D1-204ENST00000565023 UXS1Q8NBZ7 420 aa10.3□□□□□ -0.76
VPS9D1-204ENST00000565023 WFDC10AQ9H1F0 79 aa10.3□□□□□ -0.76
VPS9D1-204ENST00000565023 CACNG5Q9UF02 275 aa10.3□□□□□ -0.76
VPS9D1-204ENST00000565023 TBC1D24Q9ULP9 559 aa10.3□□□□□ -0.76
VPS9D1-204ENST00000565023 HUWE1Q7Z6Z7 4374 aaKnown RBP10.3□□□□□ -0.76
VPS9D1-204ENST00000565023 IGHV3OR16-8A0A075B7F1 116 aa10.29□□□□□ -0.76
VPS9D1-204ENST00000565023 DUXBA0A1W2PPF3 345 aa10.29□□□□□ -0.76
VPS9D1-204ENST00000565023 TMEM213A2RRL7 107 aa10.29□□□□□ -0.76
VPS9D1-204ENST00000565023 C9orf170A2RU37 121 aa10.29□□□□□ -0.76
VPS9D1-204ENST00000565023 ZNF785A8K8V0 405 aa10.29□□□□□ -0.76
VPS9D1-204ENST00000565023 LGALS9O00182 355 aa10.29□□□□□ -0.76
VPS9D1-204ENST00000565023 SCAF4O95104 1147 aaKnown RBP10.29□□□□□ -0.76
VPS9D1-204ENST00000565023 IFNA17P01571 189 aa10.29□□□□□ -0.76
VPS9D1-204ENST00000565023 CBLN1P23435 193 aa10.29□□□□□ -0.76
VPS9D1-204ENST00000565023 IFITM3Q01628 133 aa10.29□□□□□ -0.76
VPS9D1-204ENST00000565023 ASAH1Q13510 395 aa10.29□□□□□ -0.76
VPS9D1-204ENST00000565023 Q56UQ5 140 aa10.29□□□□□ -0.76
VPS9D1-204ENST00000565023 BTNL8Q6UX41 500 aa10.29□□□□□ -0.76
VPS9D1-204ENST00000565023 ZNF114Q8NC26 417 aa10.29□□□□□ -0.76
VPS9D1-204ENST00000565023 OR1L6Q8NGR2 347 aa10.29□□□□□ -0.76
VPS9D1-204ENST00000565023 OR2K2Q8NGT1 345 aa10.29□□□□□ -0.76
VPS9D1-204ENST00000565023 OR1P1Q8NH06 330 aa10.29□□□□□ -0.76
VPS9D1-204ENST00000565023 OR52E5Q8NH55 327 aa10.29□□□□□ -0.76
VPS9D1-204ENST00000565023 MISP3Q96FF7 219 aa10.29□□□□□ -0.76
VPS9D1-204ENST00000565023 NEURL2Q9BR09 285 aa10.29□□□□□ -0.76
VPS9D1-204ENST00000565023 PDCD10Q9BUL8 212 aa10.29□□□□□ -0.76
VPS9D1-204ENST00000565023 C19orf73Q9NVV2 129 aa10.29□□□□□ -0.76
VPS9D1-204ENST00000565023 TGOLN2O43493 480 aa10.28□□□□□ -0.76
VPS9D1-204ENST00000565023 IGHV3-48P01763 117 aa10.28□□□□□ -0.76
VPS9D1-204ENST00000565023 TCRBP04435 133 aa10.28□□□□□ -0.76
VPS9D1-204ENST00000565023 OR4E1P0C645 316 aa10.28□□□□□ -0.76
VPS9D1-204ENST00000565023 SULT1A3P0DMM9 295 aa10.28□□□□□ -0.76
VPS9D1-204ENST00000565023 SULT1A4P0DMN0 295 aa10.28□□□□□ -0.76
VPS9D1-204ENST00000565023 ANXA7P20073 488 aaKnown RBP10.28□□□□□ -0.76
VPS9D1-204ENST00000565023 SPCS3P61009 180 aa10.28□□□□□ -0.76
VPS9D1-204ENST00000565023 ERHP84090 104 aaKnown RBP10.28□□□□□ -0.76
VPS9D1-204ENST00000565023 DEFB125Q8N687 156 aa10.28□□□□□ -0.76
VPS9D1-204ENST00000565023 VN1R17PQ8TDU5 208 aa10.28□□□□□ -0.76
VPS9D1-204ENST00000565023 C20orf24Q9BUV8 137 aa10.28□□□□□ -0.76
VPS9D1-204ENST00000565023 KRTAP17-1Q9BYP8 105 aa10.28□□□□□ -0.76
VPS9D1-204ENST00000565023 C20orf85Q9H1P6 137 aa10.28□□□□□ -0.76
VPS9D1-204ENST00000565023 C21orf62Q9NYP8 219 aa10.28□□□□□ -0.76
VPS9D1-204ENST00000565023 CACFD1Q9UGQ2 172 aa10.28□□□□□ -0.76
VPS9D1-204ENST00000565023 MLXQ9UH92 298 aa10.28□□□□□ -0.76
VPS9D1-204ENST00000565023 K7EIM0 57 aa10.27□□□□□ -0.77
VPS9D1-204ENST00000565023 ZNF207O43670 478 aaKnown RBP10.27□□□□□ -0.77
VPS9D1-204ENST00000565023 DHRS2Q13268 280 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms