RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 PDLIM4P50479 330 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 PCSK4Q6UW60 755 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 KIR2DL5BQ8NHK3 375 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 LHX4Q969G2 390 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 VAX2Q9UIW0 290 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 RPH3ALQ9UNE2 315 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 TEX15Q9BXT5 2789 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 C5orf52A6NGY3 159 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 APOMO95445 188 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 CD74P04233 296 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 NPSP0C0P6 89 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 SRD5A1P18405 259 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 EDDM3BP56851 147 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 TBR1Q16650 682 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 NHLRC3Q5JS37 347 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 TMEM88Q6PEY1 159 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 A0A1B0GWB2 263 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 WNT2P09544 360 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 CD1BP29016 333 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 C10orf113Q5VZT2 155 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 CST9LP1Q5W188 147 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 NRGNQ92686 78 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 TNRC6BQ9UPQ9 1833 aaKnown RBP2.82□□□□□ -1.96
CHD9-213ENST00000564845 TNFAIP6P98066 277 aaPredicted RBP2.82□□□□□ -1.96
CHD9-213ENST00000564845 MEF2BQ02080 365 aaPredicted RBP2.82□□□□□ -1.96
CHD9-213ENST00000564845 SRSF4Q08170 494 aaKnown RBP2.82□□□□□ -1.96
CHD9-213ENST00000564845 FBLN7Q53RD9 439 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 CLEC7AQ9BXN2 247 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 RPL36A-HNRNPH2H7BZ11 118 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 ZNF688P0C7X2 276 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 SLC38A11Q08AI6 406 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 TEX38Q6PEX7 206 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 SLC25A34Q6PIV7 304 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 PNKDQ8N490 385 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 AK3Q9UIJ7 227 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 IGF2RP11717 2491 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 TMEM189A5PLL7 270 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 OR2C1O95371 312 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 IGLV3-21P80748 117 aaPredicted RBP2.82□□□□□ -1.96
CHD9-213ENST00000564845 KISS1Q15726 138 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 IGFL3Q6UXB1 125 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 GGNQ86UU5 652 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 MAPK1IP1LQ8NDC0 245 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 BVESQ8NE79 360 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 OR10G7Q8NGN6 311 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 MRPL37Q9BZE1 423 aaKnown RBP2.82□□□□□ -1.96
CHD9-213ENST00000564845 RPRMQ9NS64 109 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 LOC105371242A0A075B767 164 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 IGHV3-21A0A0B4J1V1 117 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 CD8AP01732 235 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 MPV17P39210 176 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 PPP1R1AQ13522 171 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 LY6G6FQ5SQ64 297 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 DHRS11Q6UWP2 260 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 SLC25A48Q6ZT89 311 aaKnown RBP2.82□□□□□ -1.96
CHD9-213ENST00000564845 OR2C3Q8N628 320 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 TBX15Q96SF7 602 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 C3orf85A0A1B0GTC6 90 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 UBE2L6O14933 153 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 CLDN14O95500 239 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 FGF8P55075 233 aaPredicted RBP2.82□□□□□ -1.96
CHD9-213ENST00000564845 HLA-DRB3P79483 266 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 TCF15Q12870 199 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 TDRG1Q3Y452 100 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 POC1AQ8NBT0 407 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 TRBV20-1A0A075B6N2 111 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 TRBV7-1A0A0A6YYK4 115 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 MSGN1A6NI15 193 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 TMEM238C9JI98 176 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 CDIPTO14735 213 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 NPY1RP25929 384 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 TIMP3P35625 211 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 C16orf54Q6UWD8 224 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 REPIN1Q9BWE0 567 aaKnown RBP2.82□□□□□ -1.96
CHD9-213ENST00000564845 NAA60Q9H7X0 242 aa2.82□□□□□ -1.96
CHD9-213ENST00000564845 IGKV1-12A0A0C4DH73 117 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 DXOO77932 396 aaKnown RBP2.81□□□□□ -1.96
CHD9-213ENST00000564845 IGKV1D-12P01611 117 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 FCGR3AP08637 254 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 SLC25A16P16260 332 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 AZU1P20160 251 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 COL8A1P27658 744 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 Q6ZR03 302 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 STARD4Q96DR4 205 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 C20orf144Q9BQM9 153 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 AUP1Q9Y679 476 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 SCTP09683 121 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 PPIAL4GP0DN37 164 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 HOXD3P31249 432 aaPredicted RBP2.81□□□□□ -1.96
CHD9-213ENST00000564845 RPL35P42766 123 aaKnown RBP2.81□□□□□ -1.96
CHD9-213ENST00000564845 RPL31P62899 125 aaKnown RBP2.81□□□□□ -1.96
CHD9-213ENST00000564845 SRSF9Q13242 221 aaKnown RBP eCLIP2.81□□□□□ -1.96
CHD9-213ENST00000564845 HIST3H3Q16695 136 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 PPP1R1CQ8WVI7 109 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 KIAA2026Q5HYC2 2103 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 TRGV11A0A075B6L2 103 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 BCL2P10415 239 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 FAM159AQ6UWV7 190 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 WDR82Q6UXN9 313 aa2.81□□□□□ -1.96
CHD9-213ENST00000564845 FAM210BQ96KR6 192 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms