RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 MARC2Q969Z3 335 aa13.85□□□□□ -0.19
CLN6-204ENST00000564752 MISP3Q96FF7 219 aa13.85□□□□□ -0.19
CLN6-204ENST00000564752 ATP6V0BQ99437 205 aa13.85□□□□□ -0.19
CLN6-204ENST00000564752 ZNF436Q9C0F3 470 aaPredicted RBP13.85□□□□□ -0.19
CLN6-204ENST00000564752 RSL24D1Q9UHA3 163 aaKnown RBP13.85□□□□□ -0.19
CLN6-204ENST00000564752 UCP1P25874 307 aa13.84□□□□□ -0.19
CLN6-204ENST00000564752 ELLP55199 621 aaPredicted RBP13.84□□□□□ -0.19
CLN6-204ENST00000564752 ERHP84090 104 aaKnown RBP13.84□□□□□ -0.19
CLN6-204ENST00000564752 SURF2Q15527 256 aaPredicted RBP13.84□□□□□ -0.19
CLN6-204ENST00000564752 SPINK9Q5DT21 86 aa13.84□□□□□ -0.19
CLN6-204ENST00000564752 BTNL8Q6UX41 500 aa13.84□□□□□ -0.19
CLN6-204ENST00000564752 SLC35G3Q8N808 338 aa13.84□□□□□ -0.19
CLN6-204ENST00000564752 ZNF114Q8NC26 417 aa13.84□□□□□ -0.19
CLN6-204ENST00000564752 RRNAD1Q96FB5 475 aaKnown RBP13.84□□□□□ -0.19
CLN6-204ENST00000564752 PDCD10Q9BUL8 212 aa13.84□□□□□ -0.19
CLN6-204ENST00000564752 CCDC160A6NGH7 325 aa13.83□□□□□ -0.2
CLN6-204ENST00000564752 GSTZ1O43708 216 aaPredicted RBP13.83□□□□□ -0.2
CLN6-204ENST00000564752 P0C879 139 aa13.83□□□□□ -0.2
CLN6-204ENST00000564752 C8orf88P0DMB2 117 aa13.83□□□□□ -0.2
CLN6-204ENST00000564752 PRRT1Q99946 306 aa13.83□□□□□ -0.2
CLN6-204ENST00000564752 MRPL27Q9P0M9 148 aaKnown RBP13.83□□□□□ -0.2
CLN6-204ENST00000564752 TEX13DA0A0J9YY54 714 aaPredicted RBP13.82□□□□□ -0.2
CLN6-204ENST00000564752 ANKRD20A5PA0PJZ0 165 aa13.82□□□□□ -0.2
CLN6-204ENST00000564752 FABP12A6NFH5 140 aa13.82□□□□□ -0.2
CLN6-204ENST00000564752 F8W735 103 aaPredicted RBP13.82□□□□□ -0.2
CLN6-204ENST00000564752 NDUFA4O00483 81 aa13.82□□□□□ -0.2
CLN6-204ENST00000564752 ST8SIA3O43173 380 aa13.82□□□□□ -0.2
CLN6-204ENST00000564752 IFNA17P01571 189 aa13.82□□□□□ -0.2
CLN6-204ENST00000564752 OR5AC1P0C628 307 aa13.82□□□□□ -0.2
CLN6-204ENST00000564752 TNFSF8P32971 234 aa13.82□□□□□ -0.2
CLN6-204ENST00000564752 OR51S1Q8NGJ8 323 aa13.82□□□□□ -0.2
CLN6-204ENST00000564752 OR52B4Q8NGK2 314 aa13.82□□□□□ -0.2
CLN6-204ENST00000564752 CHRDL1Q9BU40 450 aa13.82□□□□□ -0.2
CLN6-204ENST00000564752 C5orf66Q9H5L9 145 aa13.82□□□□□ -0.2
CLN6-204ENST00000564752 NAA60Q9H7X0 242 aa13.82□□□□□ -0.2
CLN6-204ENST00000564752 DAZ1Q9NQZ3 744 aaKnown RBP13.82□□□□□ -0.2
CLN6-204ENST00000564752 ALMS1Q8TCU4 4167 aa13.82□□□□□ -0.2
CLN6-204ENST00000564752 TRAV25A0A0B4J276 109 aa13.81□□□□□ -0.2
CLN6-204ENST00000564752 A0A0B4J293 547 aa13.81□□□□□ -0.2
CLN6-204ENST00000564752 JTBO76095 146 aa13.81□□□□□ -0.2
CLN6-204ENST00000564752 SCAF4O95104 1147 aaKnown RBP13.81□□□□□ -0.2
CLN6-204ENST00000564752 HOXA1P49639 335 aaPredicted RBP13.81□□□□□ -0.2
CLN6-204ENST00000564752 ANKRD55Q3KP44 614 aa13.81□□□□□ -0.2
CLN6-204ENST00000564752 PINX1Q96BK5 328 aaKnown RBP13.81□□□□□ -0.2
CLN6-204ENST00000564752 RTBDNQ9BSG5 229 aaPredicted RBP13.81□□□□□ -0.2
CLN6-204ENST00000564752 C20orf24Q9BUV8 137 aa13.81□□□□□ -0.2
CLN6-204ENST00000564752 NXF2Q9GZY0 626 aaKnown RBP13.81□□□□□ -0.2
CLN6-204ENST00000564752 TMEM222Q9H0R3 208 aa13.81□□□□□ -0.2
CLN6-204ENST00000564752 I3L2K1 104 aa13.8□□□□□ -0.2
CLN6-204ENST00000564752 NUPL2O15504 423 aaKnown RBP13.8□□□□□ -0.2
CLN6-204ENST00000564752 MT-CO2P00403 227 aa13.8□□□□□ -0.2
CLN6-204ENST00000564752 ADMP35318 185 aa13.8□□□□□ -0.2
CLN6-204ENST00000564752 SNCAP37840 140 aa13.8□□□□□ -0.2
CLN6-204ENST00000564752 MFAP4P55083 255 aa13.8□□□□□ -0.2
CLN6-204ENST00000564752 RBPMS2Q6ZRY4 209 aaKnown RBP13.8□□□□□ -0.2
CLN6-204ENST00000564752 GGTLC1Q9BX51 225 aa13.8□□□□□ -0.2
CLN6-204ENST00000564752 ENY2Q9NPA8 101 aa13.8□□□□□ -0.2
CLN6-204ENST00000564752 MCUBQ9NWR8 336 aa13.8□□□□□ -0.2
CLN6-204ENST00000564752 SCP2D1Q9UJQ7 156 aa13.8□□□□□ -0.2
CLN6-204ENST00000564752 A0A0G2JRQ6 117 aa13.79□□□□□ -0.2
CLN6-204ENST00000564752 CRYM-AS1A6NIL9 109 aa13.79□□□□□ -0.2
CLN6-204ENST00000564752 CDS2O95674 445 aa13.79□□□□□ -0.2
CLN6-204ENST00000564752 DHODHQ02127 395 aa13.79□□□□□ -0.2
CLN6-204ENST00000564752 RELQ04864 619 aaPredicted RBP13.79□□□□□ -0.2
CLN6-204ENST00000564752 FAM219AQ8IW50 185 aa13.79□□□□□ -0.2
CLN6-204ENST00000564752 RBPMSQ93062 196 aaKnown RBP13.79□□□□□ -0.2
CLN6-204ENST00000564752 TXN2Q99757 166 aa13.79□□□□□ -0.2
CLN6-204ENST00000564752 SOSTQ9BQB4 213 aa13.79□□□□□ -0.2
CLN6-204ENST00000564752 OVOL2Q9BRP0 275 aa13.79□□□□□ -0.2
CLN6-204ENST00000564752 GPR132Q9UNW8 380 aa13.79□□□□□ -0.2
CLN6-204ENST00000564752 IGHV3OR16-8A0A075B7F1 116 aa13.78□□□□□ -0.2
CLN6-204ENST00000564752 LOC102724200A0A096LPH7 203 aaPredicted RBP13.78□□□□□ -0.2
CLN6-204ENST00000564752 INS-IGF2F8WCM5 200 aa13.78□□□□□ -0.2
CLN6-204ENST00000564752 GNG7O60262 68 aa13.78□□□□□ -0.2
CLN6-204ENST00000564752 IGHV3-48P01763 117 aa13.78□□□□□ -0.2
CLN6-204ENST00000564752 CTSGP08311 255 aa13.78□□□□□ -0.2
CLN6-204ENST00000564752 FCGR2BP31994 310 aaPredicted RBP13.78□□□□□ -0.2
CLN6-204ENST00000564752 ETV6P41212 452 aa13.78□□□□□ -0.2
CLN6-204ENST00000564752 LHFPL5Q8TAF8 219 aa13.78□□□□□ -0.2
CLN6-204ENST00000564752 GLYATL2Q8WU03 294 aa13.78□□□□□ -0.2
CLN6-204ENST00000564752 CORTO00230 105 aa13.77□□□□□ -0.21
CLN6-204ENST00000564752 ZNF207O43670 478 aaKnown RBP13.77□□□□□ -0.21
CLN6-204ENST00000564752 S100A5P33763 92 aa13.77□□□□□ -0.21
CLN6-204ENST00000564752 SUB1P53999 127 aaKnown RBP eCLIP13.77□□□□□ -0.21
CLN6-204ENST00000564752 TMEM268Q5VZI3 342 aa13.77□□□□□ -0.21
CLN6-204ENST00000564752 SCGB3A2Q96PL1 93 aa13.77□□□□□ -0.21
CLN6-204ENST00000564752 C15orf62A8K5M9 175 aa13.76□□□□□ -0.21
CLN6-204ENST00000564752 K7EMT4 169 aa13.76□□□□□ -0.21
CLN6-204ENST00000564752 YIF1AO95070 293 aa13.76□□□□□ -0.21
CLN6-204ENST00000564752 FAUP35544 74 aaKnown RBP13.76□□□□□ -0.21
CLN6-204ENST00000564752 PYDC2Q56P42 97 aa13.76□□□□□ -0.21
CLN6-204ENST00000564752 SELENOHQ8IZQ5 122 aaKnown RBP13.76□□□□□ -0.21
CLN6-204ENST00000564752 SPAG8Q99932 426 aaPredicted RBP13.76□□□□□ -0.21
CLN6-204ENST00000564752 CACNG5Q9UF02 275 aa13.76□□□□□ -0.21
CLN6-204ENST00000564752 RNASE2P10153 161 aaKnown RBP13.75□□□□□ -0.21
CLN6-204ENST00000564752 NPBWR1P48145 328 aa13.75□□□□□ -0.21
CLN6-204ENST00000564752 AP3S2P59780 193 aa13.75□□□□□ -0.21
CLN6-204ENST00000564752 SPCS3P61009 180 aa13.75□□□□□ -0.21
CLN6-204ENST00000564752 LAMTOR1Q6IAA8 161 aa13.75□□□□□ -0.21
CLN6-204ENST00000564752 Q6ZRM9 215 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms