RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 OR5C1Q8NGR4 320 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 HIST1H2BHQ93079 126 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 CAPZA3Q96KX2 299 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 C2orf50Q96LR7 162 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 HIST1H2BNQ99877 126 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 HIST1H2BMQ99879 126 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 MAP1LC3BQ9GZQ8 125 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 AICDAQ9GZX7 198 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 BATF3Q9NR55 127 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 ACER3Q9NUN7 267 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 SSR3Q9UNL2 185 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 TIMM22Q9Y584 194 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 MINOS1-NBL1R4GNA1 71 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 HELZ2Q9BYK8 2649 aaKnown RBP1.56□□□□□ -2.16
UBR1-205ENST00000564540 LTBP2Q14767 1821 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 DOCK6Q96HP0 2047 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 ATG2BQ96BY7 2078 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 TRBV19A0A075B6N1 114 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 A0A1W2PRE2 83 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 H3BPC8 53 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 UBFD1O14562 309 aaKnown RBP1.55□□□□□ -2.16
UBR1-205ENST00000564540 OVOL1O14753 267 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 ORC5O43913 435 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 C1QAP02745 245 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 CSN2P05814 226 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 ZNF728P0DKX0 622 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 GZMHP20718 246 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 CD24P25063 80 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 G6PCP35575 357 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 CCR2P41597 374 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 PIGPP57054 158 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 RHEBQ15382 184 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 MIAQ16674 131 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 LCA10Q71F78 164 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 ZNF767PQ75MW2 155 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 FAM24BQ8N5W8 94 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 ZNF439Q8NDP4 499 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 OR13D1Q8NGV5 346 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 OR10J5Q8NHC4 309 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 FGF13Q92913 245 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 LYSMD1Q96S90 227 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 GPER1Q99527 375 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 MIEN1Q9BRT3 115 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 PBDC1Q9BVG4 233 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 CHST6Q9GZX3 395 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 XAGE1AQ9HD64 81 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 FAM215AQ9Y5M1 114 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 MYH3P11055 1940 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 NUP160Q12769 1436 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 REREQ9P2R6 1566 aa1.55□□□□□ -2.16
UBR1-205ENST00000564540 MAST2Q6P0Q8 1798 aa1.54□□□□□ -2.16
UBR1-205ENST00000564540 C11orf86A6NJI1 115 aa1.54□□□□□ -2.16
UBR1-205ENST00000564540 FABP5P3A8MUU1 101 aa1.54□□□□□ -2.16
UBR1-205ENST00000564540 AIPO00170 330 aa1.54□□□□□ -2.16
UBR1-205ENST00000564540 TP53I11O14683 189 aa1.54□□□□□ -2.16
UBR1-205ENST00000564540 ZNF73O43830 326 aaPredicted RBP1.54□□□□□ -2.16
UBR1-205ENST00000564540 IFNA10P01566 189 aa1.54□□□□□ -2.16
UBR1-205ENST00000564540 IFNA7P01567 189 aa1.54□□□□□ -2.16
UBR1-205ENST00000564540 IFNA14P01570 189 aa1.54□□□□□ -2.16
UBR1-205ENST00000564540 MSNP26038 577 aaKnown RBP1.54□□□□□ -2.16
UBR1-205ENST00000564540 CA5AP35218 305 aa1.54□□□□□ -2.16
UBR1-205ENST00000564540 CDC42P60953 191 aa1.54□□□□□ -2.16
UBR1-205ENST00000564540 AKR1C1Q04828 323 aa1.54□□□□□ -2.16
UBR1-205ENST00000564540 ZNF705AQ6ZN79 300 aaPredicted RBP1.54□□□□□ -2.16
UBR1-205ENST00000564540 C12orf29Q8N999 325 aa1.54□□□□□ -2.16
UBR1-205ENST00000564540 GRPEL2Q8TAA5 225 aa1.54□□□□□ -2.16
UBR1-205ENST00000564540 RMND5BQ96G75 393 aaPredicted RBP1.54□□□□□ -2.16
UBR1-205ENST00000564540 IMMP2LQ96T52 175 aa1.54□□□□□ -2.16
UBR1-205ENST00000564540 SERPINI1Q99574 410 aa1.54□□□□□ -2.16
UBR1-205ENST00000564540 TXNL4BQ9NX01 149 aaKnown RBP1.54□□□□□ -2.16
UBR1-205ENST00000564540 HSPE1-MOB4S4R3N1 261 aa1.54□□□□□ -2.16
UBR1-205ENST00000564540 SPATA31E1Q6ZUB1 1445 aa1.54□□□□□ -2.16
UBR1-205ENST00000564540 TRAV38-1A0A0B4J264 116 aa1.53□□□□□ -2.16
UBR1-205ENST00000564540 A0A0J9YW62 118 aa1.53□□□□□ -2.16
UBR1-205ENST00000564540 PRORSD1PA6NEY8 169 aa1.53□□□□□ -2.16
UBR1-205ENST00000564540 TMEM235A6NFC5 223 aa1.53□□□□□ -2.16
UBR1-205ENST00000564540 ZNF860A6NHJ4 632 aa1.53□□□□□ -2.16
UBR1-205ENST00000564540 TSTD3H0UI37 97 aa1.53□□□□□ -2.16
UBR1-205ENST00000564540 H3BT86 120 aa1.53□□□□□ -2.16
UBR1-205ENST00000564540 J3QRK9 145 aa1.53□□□□□ -2.16
UBR1-205ENST00000564540 GNRH2O43555 120 aa1.53□□□□□ -2.16
UBR1-205ENST00000564540 SYNGR2O43760 224 aa1.53□□□□□ -2.16
UBR1-205ENST00000564540 BANF1O75531 89 aa1.53□□□□□ -2.16
UBR1-205ENST00000564540 CDS2O95674 445 aa1.53□□□□□ -2.16
UBR1-205ENST00000564540 IGHV3-7P01780 117 aa1.53□□□□□ -2.16
UBR1-205ENST00000564540 RPS4Y1P22090 263 aaKnown RBP1.53□□□□□ -2.16
UBR1-205ENST00000564540 S100GP29377 79 aa1.53□□□□□ -2.16
UBR1-205ENST00000564540 CASP1P29466 404 aa1.53□□□□□ -2.16
UBR1-205ENST00000564540 RPL28P46779 137 aaKnown RBP1.53□□□□□ -2.16
UBR1-205ENST00000564540 EVX1P49640 407 aa1.53□□□□□ -2.16
UBR1-205ENST00000564540 AP1S1P61966 158 aa1.53□□□□□ -2.16
UBR1-205ENST00000564540 SARNPP82979 210 aaKnown RBP1.53□□□□□ -2.16
UBR1-205ENST00000564540 LTC4SQ16873 150 aa1.53□□□□□ -2.16
UBR1-205ENST00000564540 TERB2Q8NHR7 220 aa1.53□□□□□ -2.16
UBR1-205ENST00000564540 DYDC1Q8WWB3 177 aa1.53□□□□□ -2.16
UBR1-205ENST00000564540 PLEKHB2Q96CS7 222 aa1.53□□□□□ -2.16
UBR1-205ENST00000564540 DNAJC30Q96LL9 226 aa1.53□□□□□ -2.16
UBR1-205ENST00000564540 HIGD2AQ9BW72 106 aa1.53□□□□□ -2.16
UBR1-205ENST00000564540 ZNF471Q9BX82 626 aaPredicted RBP1.53□□□□□ -2.16
UBR1-205ENST00000564540 IMUPQ9GZP8 106 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms