RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, human

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USB1-208	ENST00000563207	TNFRSF9	Q07011	255 aa		12.05	□□□□□ -0.48
USB1-208	ENST00000563207	OR1N2	Q8NGR9	330 aa		12.05	□□□□□ -0.48
USB1-208	ENST00000563207	SEC22C	Q9BRL7	303 aa		12.05	□□□□□ -0.48
USB1-208	ENST00000563207	HUWE1	Q7Z6Z7	4374 aa	Known RBP	12.04	□□□□□ -0.48
USB1-208	ENST00000563207	MED6	O75586	246 aa		12.04	□□□□□ -0.48
USB1-208	ENST00000563207	LY86	O95711	162 aa		12.04	□□□□□ -0.48
USB1-208	ENST00000563207	LGALS1	P09382	135 aa	Known RBP	12.04	□□□□□ -0.48
USB1-208	ENST00000563207	HOXA1	P49639	335 aa	Predicted RBP	12.04	□□□□□ -0.48
USB1-208	ENST00000563207	ATP5I	P56385	69 aa	Predicted RBP	12.04	□□□□□ -0.48
USB1-208	ENST00000563207	C9orf66	Q5T8R8	295 aa		12.04	□□□□□ -0.48
USB1-208	ENST00000563207	CXorf58	Q96LI9	332 aa		12.04	□□□□□ -0.48
USB1-208	ENST00000563207	HIPK2	Q9H2X6	1198 aa		12.04	□□□□□ -0.48
USB1-208	ENST00000563207	FBXL7	Q9UJT9	491 aa		12.04	□□□□□ -0.48
USB1-208	ENST00000563207	TENM3	Q9P273	2699 aa		12.03	□□□□□ -0.48
USB1-208	ENST00000563207	CEBPZOS	A8MTT3	80 aa		12.03	□□□□□ -0.48
USB1-208	ENST00000563207	ADAP1	O75689	374 aa		12.03	□□□□□ -0.48
USB1-208	ENST00000563207	OR2J3	O76001	311 aa		12.03	□□□□□ -0.48
USB1-208	ENST00000563207	PRH1	P02810	166 aa		12.03	□□□□□ -0.48
USB1-208	ENST00000563207	HTR2B	P41595	481 aa		12.03	□□□□□ -0.48
USB1-208	ENST00000563207	SLURP1	P55000	103 aa		12.03	□□□□□ -0.48
USB1-208	ENST00000563207	RGS21	Q2M5E4	152 aa		12.03	□□□□□ -0.48
USB1-208	ENST00000563207	C15orf32	Q32M92	178 aa		12.03	□□□□□ -0.48
USB1-208	ENST00000563207	SLC25A24	Q6NUK1	477 aa		12.03	□□□□□ -0.48
USB1-208	ENST00000563207	ZNF343	Q6P1L6	599 aa		12.03	□□□□□ -0.48
USB1-208	ENST00000563207	NOXA1	Q86UR1	476 aa		12.03	□□□□□ -0.48
USB1-208	ENST00000563207	DCUN1D4	Q92564	292 aa		12.03	□□□□□ -0.48
USB1-208	ENST00000563207	ATP6V0B	Q99437	205 aa		12.03	□□□□□ -0.48
USB1-208	ENST00000563207	RANGRF	Q9HD47	186 aa	Predicted RBP	12.03	□□□□□ -0.48
USB1-208	ENST00000563207	HEYL	Q9NQ87	328 aa	Predicted RBP	12.03	□□□□□ -0.48
USB1-208	ENST00000563207	TRBV7-1	A0A0A6YYK4	115 aa		12.02	□□□□□ -0.49
USB1-208	ENST00000563207	CORT	O00230	105 aa		12.02	□□□□□ -0.49
USB1-208	ENST00000563207	HSPB1	P04792	205 aa	Known RBP	12.02	□□□□□ -0.49
USB1-208	ENST00000563207	ZNF616	Q08AN1	781 aa		12.02	□□□□□ -0.49
USB1-208	ENST00000563207	BSX	Q3C1V8	233 aa		12.02	□□□□□ -0.49
USB1-208	ENST00000563207	PVRIG	Q6DKI7	326 aa		12.02	□□□□□ -0.49
USB1-208	ENST00000563207	UXS1	Q8NBZ7	420 aa		12.02	□□□□□ -0.49
USB1-208	ENST00000563207	VN1R17P	Q8TDU5	208 aa		12.02	□□□□□ -0.49
USB1-208	ENST00000563207	DLX4	Q92988	240 aa	Predicted RBP	12.02	□□□□□ -0.49
USB1-208	ENST00000563207	EEF1AKMT3	Q96AZ1	226 aa		12.02	□□□□□ -0.49
USB1-208	ENST00000563207	CIB3	Q96Q77	187 aa	Predicted RBP	12.02	□□□□□ -0.49
USB1-208	ENST00000563207		U3KQ87	197 aa		12.02	□□□□□ -0.49
USB1-208	ENST00000563207	IGHV4OR15-8	A0A075B7B6	117 aa		12.01	□□□□□ -0.49
USB1-208	ENST00000563207		A0A087WW49	117 aa		12.01	□□□□□ -0.49
USB1-208	ENST00000563207	NDUFB8	O95169	186 aa		12.01	□□□□□ -0.49
USB1-208	ENST00000563207	OR8U8	P0C7N1	319 aa		12.01	□□□□□ -0.49
USB1-208	ENST00000563207	ID3	Q02535	119 aa		12.01	□□□□□ -0.49
USB1-208	ENST00000563207	IAH1	Q2TAA2	248 aa	Predicted RBP	12.01	□□□□□ -0.49
USB1-208	ENST00000563207	SPINK9	Q5DT21	86 aa		12.01	□□□□□ -0.49
USB1-208	ENST00000563207	DTD1	Q8TEA8	209 aa		12.01	□□□□□ -0.49
USB1-208	ENST00000563207	WWC2-AS2	Q96NR7	200 aa		12.01	□□□□□ -0.49
USB1-208	ENST00000563207	RBKS	Q9H477	322 aa		12.01	□□□□□ -0.49
USB1-208	ENST00000563207	PEF1	Q9UBV8	284 aa	Known RBP	12.01	□□□□□ -0.49
USB1-208	ENST00000563207	DMRT1	Q9Y5R6	373 aa		12.01	□□□□□ -0.49
USB1-208	ENST00000563207	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	12	□□□□□ -0.49
USB1-208	ENST00000563207	LINC01619	G3V211	115 aa		12	□□□□□ -0.49
USB1-208	ENST00000563207	SYNGR2	O43760	224 aa		12	□□□□□ -0.49
USB1-208	ENST00000563207	IGHV3-11	P01762	117 aa		12	□□□□□ -0.49
USB1-208	ENST00000563207	RNASE2	P10153	161 aa	Known RBP	12	□□□□□ -0.49
USB1-208	ENST00000563207	SPN	P16150	400 aa		12	□□□□□ -0.49
USB1-208	ENST00000563207	NKX2-1	P43699	371 aa	Predicted RBP	12	□□□□□ -0.49
USB1-208	ENST00000563207	MFAP2	P55001	183 aa		12	□□□□□ -0.49
USB1-208	ENST00000563207	EXOSC2	Q13868	293 aa	Known RBP	12	□□□□□ -0.49
USB1-208	ENST00000563207	C2orf83	Q53S99	150 aa		12	□□□□□ -0.49
USB1-208	ENST00000563207	C19orf35	Q6ZS72	473 aa		12	□□□□□ -0.49
USB1-208	ENST00000563207	OR4D5	Q8NGN0	318 aa		12	□□□□□ -0.49
USB1-208	ENST00000563207	ZNF256	Q9Y2P7	627 aa	Predicted RBP	12	□□□□□ -0.49
USB1-208	ENST00000563207	C7orf66	A4D0T2	115 aa		11.99	□□□□□ -0.49
USB1-208	ENST00000563207	MPTX1	A8MV57	137 aa		11.99	□□□□□ -0.49
USB1-208	ENST00000563207	ZP3	P21754	424 aa		11.99	□□□□□ -0.49
USB1-208	ENST00000563207	RPP30	P78346	268 aa	Known RBP	11.99	□□□□□ -0.49
USB1-208	ENST00000563207	TATDN3	Q17R31	274 aa		11.99	□□□□□ -0.49
USB1-208	ENST00000563207	GSG1L	Q6UXU4	331 aa		11.99	□□□□□ -0.49
USB1-208	ENST00000563207	HAPLN4	Q86UW8	402 aa		11.99	□□□□□ -0.49
USB1-208	ENST00000563207	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	11.99	□□□□□ -0.49
USB1-208	ENST00000563207	SLC24A4	Q8NFF2	622 aa		11.99	□□□□□ -0.49
USB1-208	ENST00000563207	RNASEH2C	Q8TDP1	164 aa	Known RBP	11.99	□□□□□ -0.49
USB1-208	ENST00000563207	OR10C1	Q96KK4	312 aa		11.99	□□□□□ -0.49
USB1-208	ENST00000563207	C2orf50	Q96LR7	162 aa		11.99	□□□□□ -0.49
USB1-208	ENST00000563207	GAR1	Q9NY12	217 aa	Known RBP	11.99	□□□□□ -0.49
USB1-208	ENST00000563207		U3KQK5	164 aa		11.99	□□□□□ -0.49
USB1-208	ENST00000563207	C5orf51	A6NDU8	294 aa		11.98	□□□□□ -0.49
USB1-208	ENST00000563207	WRB	O00258	174 aa		11.98	□□□□□ -0.49
USB1-208	ENST00000563207	OVOL1	O14753	267 aa		11.98	□□□□□ -0.49
USB1-208	ENST00000563207	NXPH3	O95157	252 aa		11.98	□□□□□ -0.49
USB1-208	ENST00000563207	FCGR2B	P31994	310 aa	Predicted RBP	11.98	□□□□□ -0.49
USB1-208	ENST00000563207	ZNF502	Q8TBZ5	544 aa		11.98	□□□□□ -0.49
USB1-208	ENST00000563207	MISP3	Q96FF7	219 aa		11.98	□□□□□ -0.49
USB1-208	ENST00000563207	TXN2	Q99757	166 aa		11.98	□□□□□ -0.49
USB1-208	ENST00000563207	FAM25E	A8MYX2	175 aa		11.97	□□□□□ -0.49
USB1-208	ENST00000563207		I3L2K1	104 aa		11.97	□□□□□ -0.49
USB1-208	ENST00000563207		K7EIM0	57 aa		11.97	□□□□□ -0.49
USB1-208	ENST00000563207	IFNA10	P01566	189 aa		11.97	□□□□□ -0.49
USB1-208	ENST00000563207	NPY1R	P25929	384 aa		11.97	□□□□□ -0.49
USB1-208	ENST00000563207	DEFA5	Q01523	94 aa		11.97	□□□□□ -0.49
USB1-208	ENST00000563207	OXA1L	Q15070	435 aa		11.97	□□□□□ -0.49
USB1-208	ENST00000563207	SCARB1	Q8WTV0	552 aa		11.97	□□□□□ -0.49
USB1-208	ENST00000563207	C21orf62	Q9NYP8	219 aa		11.97	□□□□□ -0.49
USB1-208	ENST00000563207	GSKIP	Q9P0R6	139 aa		11.97	□□□□□ -0.49
USB1-208	ENST00000563207	RPS10-NUDT3	A0A1W2PQS6	291 aa		11.96	□□□□□ -0.49
USB1-208	ENST00000563207	ANKRD34B	A5PLL1	514 aa		11.96	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms