RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 FHL3Q13643 280 aa12.63□□□□□ -0.39
USB1-206ENST00000562534 EXOSC2Q13868 293 aaKnown RBP12.63□□□□□ -0.39
USB1-206ENST00000562534 BSXQ3C1V8 233 aa12.63□□□□□ -0.39
USB1-206ENST00000562534 C2orf83Q53S99 150 aa12.63□□□□□ -0.39
USB1-206ENST00000562534 PVRIGQ6DKI7 326 aa12.63□□□□□ -0.39
USB1-206ENST00000562534 ETV3LQ6ZN32 361 aa12.63□□□□□ -0.39
USB1-206ENST00000562534 MISP3Q96FF7 219 aa12.63□□□□□ -0.39
USB1-206ENST00000562534 OR10C1Q96KK4 312 aa12.63□□□□□ -0.39
USB1-206ENST00000562534 DUX3Q96PT4 197 aa12.63□□□□□ -0.39
USB1-206ENST00000562534 CIB3Q96Q77 187 aaPredicted RBP12.63□□□□□ -0.39
USB1-206ENST00000562534 ATP6V0BQ99437 205 aa12.63□□□□□ -0.39
USB1-206ENST00000562534 GSKIPQ9P0R6 139 aa12.63□□□□□ -0.39
USB1-206ENST00000562534 IFNA10P01566 189 aa12.62□□□□□ -0.39
USB1-206ENST00000562534 CLEC3BP05452 202 aa12.62□□□□□ -0.39
USB1-206ENST00000562534 CD33P20138 364 aa12.62□□□□□ -0.39
USB1-206ENST00000562534 RPP30P78346 268 aaKnown RBP12.62□□□□□ -0.39
USB1-206ENST00000562534 GSG1LQ6UXU4 331 aa12.62□□□□□ -0.39
USB1-206ENST00000562534 LINC00482Q8N8I6 264 aa12.62□□□□□ -0.39
USB1-206ENST00000562534 OR4D5Q8NGN0 318 aa12.62□□□□□ -0.39
USB1-206ENST00000562534 SCARB1Q8WTV0 552 aa12.62□□□□□ -0.39
USB1-206ENST00000562534 C2orf50Q96LR7 162 aa12.62□□□□□ -0.39
USB1-206ENST00000562534 GAR1Q9NY12 217 aaKnown RBP12.62□□□□□ -0.39
USB1-206ENST00000562534 IGHV4OR15-8A0A075B7B6 117 aa12.61□□□□□ -0.39
USB1-206ENST00000562534 A0A087WW49 117 aa12.61□□□□□ -0.39
USB1-206ENST00000562534 FAM25EA8MYX2 175 aa12.61□□□□□ -0.39
USB1-206ENST00000562534 WRBO00258 174 aa12.61□□□□□ -0.39
USB1-206ENST00000562534 TATDN3Q17R31 274 aa12.61□□□□□ -0.39
USB1-206ENST00000562534 ZBTB8BQ8NAP8 495 aaPredicted RBP12.61□□□□□ -0.39
USB1-206ENST00000562534 SLC24A4Q8NFF2 622 aa12.61□□□□□ -0.39
USB1-206ENST00000562534 TXN2Q99757 166 aa12.61□□□□□ -0.39
USB1-206ENST00000562534 C21orf62Q9NYP8 219 aa12.61□□□□□ -0.39
USB1-206ENST00000562534 MFSD2BA6NFX1 497 aa12.6□□□□□ -0.39
USB1-206ENST00000562534 I3L2K1 104 aa12.6□□□□□ -0.39
USB1-206ENST00000562534 K7EIM0 57 aa12.6□□□□□ -0.39
USB1-206ENST00000562534 GGCTO75223 188 aaKnown RBP12.6□□□□□ -0.39
USB1-206ENST00000562534 MT-CO2P00403 227 aa12.6□□□□□ -0.39
USB1-206ENST00000562534 NPY1RP25929 384 aa12.6□□□□□ -0.39
USB1-206ENST00000562534 MFAP4P55083 255 aa12.6□□□□□ -0.39
USB1-206ENST00000562534 CLEC19AQ6UXS0 136 aa12.6□□□□□ -0.39
USB1-206ENST00000562534 ZNF502Q8TBZ5 544 aa12.6□□□□□ -0.39
USB1-206ENST00000562534 RNASEH2CQ8TDP1 164 aaKnown RBP12.6□□□□□ -0.39
USB1-206ENST00000562534 PINX1Q96BK5 328 aaKnown RBP12.6□□□□□ -0.39
USB1-206ENST00000562534 MCRIP2Q9BUT9 160 aaKnown RBP12.6□□□□□ -0.39
USB1-206ENST00000562534 MAGT1Q9H0U3 335 aa12.6□□□□□ -0.39
USB1-206ENST00000562534 ANK2Q01484 3957 aa12.59□□□□□ -0.39
USB1-206ENST00000562534 C7orf66A4D0T2 115 aa12.59□□□□□ -0.39
USB1-206ENST00000562534 CCSO14618 274 aa12.59□□□□□ -0.39
USB1-206ENST00000562534 SSNA1O43805 119 aa12.59□□□□□ -0.39
USB1-206ENST00000562534 IGHV3-23P01764 117 aa12.59□□□□□ -0.39
USB1-206ENST00000562534 RAB11AP62491 216 aa12.59□□□□□ -0.39
USB1-206ENST00000562534 RPEL1Q2QD12 228 aa12.59□□□□□ -0.39
USB1-206ENST00000562534 ETFRF1Q6IPR1 90 aa12.59□□□□□ -0.39
USB1-206ENST00000562534 RCC1LQ96I51 464 aaKnown RBP12.59□□□□□ -0.39
USB1-206ENST00000562534 CCDC140Q96MF4 163 aa12.59□□□□□ -0.39
USB1-206ENST00000562534 S4R3C0 116 aa12.59□□□□□ -0.39
USB1-206ENST00000562534 RPS10-NUDT3A0A1W2PQS6 291 aa12.58□□□□□ -0.4
USB1-206ENST00000562534 TRBV12-3P01733 135 aa12.58□□□□□ -0.4
USB1-206ENST00000562534 HOXD3P31249 432 aaPredicted RBP12.58□□□□□ -0.4
USB1-206ENST00000562534 FCGR2BP31994 310 aaPredicted RBP12.58□□□□□ -0.4
USB1-206ENST00000562534 ARL3P36405 182 aa12.58□□□□□ -0.4
USB1-206ENST00000562534 NPBWR1P48145 328 aa12.58□□□□□ -0.4
USB1-206ENST00000562534 POLR2GP62487 172 aaKnown RBP eCLIP12.58□□□□□ -0.4
USB1-206ENST00000562534 CYCSP99999 105 aaKnown RBP12.58□□□□□ -0.4
USB1-206ENST00000562534 KLF5Q13887 457 aaPredicted RBP12.58□□□□□ -0.4
USB1-206ENST00000562534 OXA1LQ15070 435 aa12.58□□□□□ -0.4
USB1-206ENST00000562534 SPSB3Q6PJ21 355 aa12.58□□□□□ -0.4
USB1-206ENST00000562534 DCUN1D4Q92564 292 aa12.58□□□□□ -0.4
USB1-206ENST00000562534 DLX4Q92988 240 aaPredicted RBP12.58□□□□□ -0.4
USB1-206ENST00000562534 BSCL2Q96G97 398 aaPredicted RBP12.58□□□□□ -0.4
USB1-206ENST00000562534 SMIM8Q96KF7 97 aa12.58□□□□□ -0.4
USB1-206ENST00000562534 RAB40CQ96S21 281 aa12.58□□□□□ -0.4
USB1-206ENST00000562534 IGHV3-21A0A0B4J1V1 117 aa12.57□□□□□ -0.4
USB1-206ENST00000562534 BMPR1BO00238 502 aa12.57□□□□□ -0.4
USB1-206ENST00000562534 OVOL1O14753 267 aa12.57□□□□□ -0.4
USB1-206ENST00000562534 SCGB1D2O95969 90 aa12.57□□□□□ -0.4
USB1-206ENST00000562534 IFNA4P05014 189 aa12.57□□□□□ -0.4
USB1-206ENST00000562534 IAPPP10997 89 aa12.57□□□□□ -0.4
USB1-206ENST00000562534 OPRK1P41145 380 aa12.57□□□□□ -0.4
USB1-206ENST00000562534 SLURP1P55000 103 aa12.57□□□□□ -0.4
USB1-206ENST00000562534 TAS2R30P59541 319 aa12.57□□□□□ -0.4
USB1-206ENST00000562534 FAM106AQ4KMX7 169 aa12.57□□□□□ -0.4
USB1-206ENST00000562534 Q56UQ5 140 aa12.57□□□□□ -0.4
USB1-206ENST00000562534 GPHB5Q86YW7 130 aa12.57□□□□□ -0.4
USB1-206ENST00000562534 WNK1Q9H4A3 2382 aa12.56□□□□□ -0.4
USB1-206ENST00000562534 PPP5D1E7EU14 171 aa12.56□□□□□ -0.4
USB1-206ENST00000562534 GOSR2O14653 212 aa12.56□□□□□ -0.4
USB1-206ENST00000562534 OR2C1O95371 312 aa12.56□□□□□ -0.4
USB1-206ENST00000562534 MBPP02686 304 aaPredicted RBP12.56□□□□□ -0.4
USB1-206ENST00000562534 SLC25A4P12235 298 aa12.56□□□□□ -0.4
USB1-206ENST00000562534 GPR183P32249 361 aa12.56□□□□□ -0.4
USB1-206ENST00000562534 GPX4P36969 197 aaPredicted RBP12.56□□□□□ -0.4
USB1-206ENST00000562534 IL15RAQ13261 267 aa12.56□□□□□ -0.4
USB1-206ENST00000562534 SPANXN5Q5MJ07 72 aa12.56□□□□□ -0.4
USB1-206ENST00000562534 ACSM6Q6P461 480 aa12.56□□□□□ -0.4
USB1-206ENST00000562534 UBAC2Q8NBM4 344 aa12.56□□□□□ -0.4
USB1-206ENST00000562534 TMEM170AQ8WVE7 144 aa12.56□□□□□ -0.4
USB1-206ENST00000562534 GPR61Q9BZJ8 451 aa12.56□□□□□ -0.4
USB1-206ENST00000562534 PSENENQ9NZ42 101 aa12.56□□□□□ -0.4
USB1-206ENST00000562534 STRAPQ9Y3F4 350 aaKnown RBP12.56□□□□□ -0.4
USB1-206ENST00000562534 ALG5Q9Y673 324 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms