RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 PINX1Q96BK5 328 aaKnown RBP18.83■□□□□ 0.6
NME3-202ENST00000561637 TRAV25A0A0B4J276 109 aa18.82■□□□□ 0.6
NME3-202ENST00000561637 ST8SIA3O43173 380 aa18.82■□□□□ 0.6
NME3-202ENST00000561637 AKR1C2P52895 323 aa18.82■□□□□ 0.6
NME3-202ENST00000561637 ZNF114Q8NC26 417 aa18.82■□□□□ 0.6
NME3-202ENST00000561637 DYNC2LI1Q8TCX1 351 aa18.82■□□□□ 0.6
NME3-202ENST00000561637 C5orf66Q9H5L9 145 aa18.82■□□□□ 0.6
NME3-202ENST00000561637 COPZ2Q9P299 210 aa18.82■□□□□ 0.6
NME3-202ENST00000561637 TRIM16LQ309B1 348 aa18.81■□□□□ 0.6
NME3-202ENST00000561637 SMIM4Q8WVI0 70 aa18.81■□□□□ 0.6
NME3-202ENST00000561637 MFAP4P55083 255 aa18.8■□□□□ 0.6
NME3-202ENST00000561637 Q6ZRM9 215 aa18.8■□□□□ 0.6
NME3-202ENST00000561637 LHFPL5Q8TAF8 219 aa18.8■□□□□ 0.6
NME3-202ENST00000561637 ATP6V0BQ99437 205 aa18.8■□□□□ 0.6
NME3-202ENST00000561637 RTBDNQ9BSG5 229 aaPredicted RBP18.8■□□□□ 0.6
NME3-202ENST00000561637 GGTLC1Q9BX51 225 aa18.8■□□□□ 0.6
NME3-202ENST00000561637 IGHV3OR16-13A0A075B7E8 117 aa18.79■□□□□ 0.6
NME3-202ENST00000561637 IGHV3-74A0A0B4J1X5 117 aa18.79■□□□□ 0.6
NME3-202ENST00000561637 TSPAN4O14817 238 aa18.79■□□□□ 0.6
NME3-202ENST00000561637 CTSDP07339 412 aaPredicted RBP18.79■□□□□ 0.6
NME3-202ENST00000561637 UCP1P25874 307 aa18.79■□□□□ 0.6
NME3-202ENST00000561637 ETV6P41212 452 aa18.79■□□□□ 0.6
NME3-202ENST00000561637 ODF3L2Q3SX64 289 aa18.79■□□□□ 0.6
NME3-202ENST00000561637 SLC35G3Q8N808 338 aa18.79■□□□□ 0.6
NME3-202ENST00000561637 OR4C16Q8NGL9 310 aa18.79■□□□□ 0.6
NME3-202ENST00000561637 ZFAND1Q8TCF1 268 aa18.79■□□□□ 0.6
NME3-202ENST00000561637 SPAG8Q99932 426 aaPredicted RBP18.79■□□□□ 0.6
NME3-202ENST00000561637 MRPL36Q9P0J6 103 aaKnown RBP18.79■□□□□ 0.6
NME3-202ENST00000561637 OR5AC1P0C628 307 aa18.78■□□□□ 0.6
NME3-202ENST00000561637 IL18Q14116 193 aa18.78■□□□□ 0.6
NME3-202ENST00000561637 ANKRD55Q3KP44 614 aa18.78■□□□□ 0.6
NME3-202ENST00000561637 CCDC71LQ8N9Z2 235 aa18.78■□□□□ 0.6
NME3-202ENST00000561637 RAB2BQ8WUD1 216 aa18.78■□□□□ 0.6
NME3-202ENST00000561637 C15orf40Q8WUR7 153 aa18.78■□□□□ 0.6
NME3-202ENST00000561637 DIRAS2Q96HU8 199 aa18.78■□□□□ 0.6
NME3-202ENST00000561637 RNF2Q99496 336 aa18.78■□□□□ 0.6
NME3-202ENST00000561637 CCDC59Q9P031 241 aaKnown RBP18.78■□□□□ 0.6
NME3-202ENST00000561637 SMPXQ9UHP9 88 aa18.78■□□□□ 0.6
NME3-202ENST00000561637 K7EMT4 169 aa18.77■□□□□ 0.6
NME3-202ENST00000561637 NUPL2O15504 423 aaKnown RBP18.77■□□□□ 0.6
NME3-202ENST00000561637 YIF1AO95070 293 aa18.77■□□□□ 0.6
NME3-202ENST00000561637 IFNA17P01571 189 aa18.77■□□□□ 0.6
NME3-202ENST00000561637 RNASE2P10153 161 aaKnown RBP18.77■□□□□ 0.6
NME3-202ENST00000561637 ERHP84090 104 aaKnown RBP18.77■□□□□ 0.6
NME3-202ENST00000561637 NXF2Q9GZY0 626 aaKnown RBP18.77■□□□□ 0.6
NME3-202ENST00000561637 LOC102724200A0A096LPH7 203 aaPredicted RBP18.76■□□□□ 0.59
NME3-202ENST00000561637 IGHV7-4-1A0A0J9YVY3 117 aa18.76■□□□□ 0.59
NME3-202ENST00000561637 C15orf62A8K5M9 175 aa18.76■□□□□ 0.59
NME3-202ENST00000561637 FCGR2BP31994 310 aaPredicted RBP18.76■□□□□ 0.59
NME3-202ENST00000561637 MLANAQ16655 118 aa18.76■□□□□ 0.59
NME3-202ENST00000561637 OVOL2Q9BRP0 275 aa18.76■□□□□ 0.59
NME3-202ENST00000561637 C6orf62Q9GZU0 229 aaPredicted RBP18.76■□□□□ 0.59
NME3-202ENST00000561637 PRR13Q9NZ81 148 aa18.76■□□□□ 0.59
NME3-202ENST00000561637 CHEK1O14757 476 aa18.75■□□□□ 0.59
NME3-202ENST00000561637 HOXA1P49639 335 aaPredicted RBP18.75■□□□□ 0.59
NME3-202ENST00000561637 TMBIM6P55061 237 aa18.75■□□□□ 0.59
NME3-202ENST00000561637 MRPS10P82664 201 aaKnown RBP18.75■□□□□ 0.59
NME3-202ENST00000561637 SSBP1Q04837 148 aaKnown RBP18.75■□□□□ 0.59
NME3-202ENST00000561637 ZNF124Q15973 351 aa18.75■□□□□ 0.59
NME3-202ENST00000561637 IL17DQ8TAD2 202 aa18.75■□□□□ 0.59
NME3-202ENST00000561637 GLYATL2Q8WU03 294 aa18.75■□□□□ 0.59
NME3-202ENST00000561637 RHPN1-AS1Q9BWJ2 59 aa18.75■□□□□ 0.59
NME3-202ENST00000561637 SLIRPQ9GZT3 109 aaKnown RBP18.75■□□□□ 0.59
NME3-202ENST00000561637 TMEM222Q9H0R3 208 aa18.75■□□□□ 0.59
NME3-202ENST00000561637 NAA60Q9H7X0 242 aa18.75■□□□□ 0.59
NME3-202ENST00000561637 IGKV3-7A0A075B6H7 116 aa18.74■□□□□ 0.59
NME3-202ENST00000561637 H3BMQ9 156 aa18.74■□□□□ 0.59
NME3-202ENST00000561637 GNG7O60262 68 aa18.74■□□□□ 0.59
NME3-202ENST00000561637 RELQ04864 619 aaPredicted RBP18.74■□□□□ 0.59
NME3-202ENST00000561637 MEF2DQ14814 521 aa18.74■□□□□ 0.59
NME3-202ENST00000561637 PVRIGQ6DKI7 326 aa18.74■□□□□ 0.59
NME3-202ENST00000561637 TMEM116Q8NCL8 245 aa18.74■□□□□ 0.59
NME3-202ENST00000561637 OR51S1Q8NGJ8 323 aa18.74■□□□□ 0.59
NME3-202ENST00000561637 RNASE11Q8TAA1 199 aaKnown RBP18.74■□□□□ 0.59
NME3-202ENST00000561637 OR10C1Q96KK4 312 aa18.74■□□□□ 0.59
NME3-202ENST00000561637 TXN2Q99757 166 aa18.74■□□□□ 0.59
NME3-202ENST00000561637 FNDC4Q9H6D8 234 aaPredicted RBP18.74■□□□□ 0.59
NME3-202ENST00000561637 CTDSPLO15194 276 aa18.73■□□□□ 0.59
NME3-202ENST00000561637 APOHP02749 345 aaPredicted RBP18.73■□□□□ 0.59
NME3-202ENST00000561637 AKAIN1P0CW23 69 aa18.73■□□□□ 0.59
NME3-202ENST00000561637 SNCAP37840 140 aa18.73■□□□□ 0.59
NME3-202ENST00000561637 TFPI2P48307 235 aa18.73■□□□□ 0.59
NME3-202ENST00000561637 LAMTOR1Q6IAA8 161 aa18.73■□□□□ 0.59
NME3-202ENST00000561637 TOMM20LQ6UXN7 152 aa18.73■□□□□ 0.59
NME3-202ENST00000561637 SELENOHQ8IZQ5 122 aaKnown RBP18.73■□□□□ 0.59
NME3-202ENST00000561637 LILRB2Q8N423 598 aa18.73■□□□□ 0.59
NME3-202ENST00000561637 RRNAD1Q96FB5 475 aaKnown RBP18.73■□□□□ 0.59
NME3-202ENST00000561637 C14orf166Q9Y224 244 aaKnown RBP18.73■□□□□ 0.59
NME3-202ENST00000561637 IGHV3-66A0A0C4DH42 116 aa18.72■□□□□ 0.59
NME3-202ENST00000561637 TEX13DA0A0J9YY54 714 aaPredicted RBP18.72■□□□□ 0.59
NME3-202ENST00000561637 DISC1C4P0D8 188 aa18.72■□□□□ 0.59
NME3-202ENST00000561637 INS-IGF2F8WCM5 200 aa18.72■□□□□ 0.59
NME3-202ENST00000561637 CDS2O95674 445 aa18.72■□□□□ 0.59
NME3-202ENST00000561637 LINC00476Q8WZB0 136 aa18.72■□□□□ 0.59
NME3-202ENST00000561637 TMEM230Q96A57 120 aa18.72■□□□□ 0.59
NME3-202ENST00000561637 GPR132Q9UNW8 380 aa18.72■□□□□ 0.59
NME3-202ENST00000561637 KMT2AQ03164 3969 aa18.72■□□□□ 0.59
NME3-202ENST00000561637 A0A1B0GU03 582 aa18.71■□□□□ 0.59
NME3-202ENST00000561637 ANKRD20A5PA0PJZ0 165 aa18.71■□□□□ 0.59
NME3-202ENST00000561637 RPL35AP18077 110 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms