RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 IGKV1OR2-108A0A075B7D4 117 aa13.52□□□□□ -0.25
TPM1-228ENST00000560975 C15orf65H3BRN8 121 aa13.52□□□□□ -0.25
TPM1-228ENST00000560975 ZNF134P52741 427 aa13.52□□□□□ -0.25
TPM1-228ENST00000560975 C1orf229Q6ZS94 237 aaPredicted RBP13.52□□□□□ -0.25
TPM1-228ENST00000560975 NUDT10Q8NFP7 164 aa13.52□□□□□ -0.25
TPM1-228ENST00000560975 NANOS1Q8WY41 292 aaKnown RBP13.52□□□□□ -0.25
TPM1-228ENST00000560975 SGK494Q96LW2 274 aa13.52□□□□□ -0.25
TPM1-228ENST00000560975 URB1-AS1Q96HZ7 61 aa13.51□□□□□ -0.25
TPM1-228ENST00000560975 FAM90A9PA6NNJ1 464 aa13.51□□□□□ -0.25
TPM1-228ENST00000560975 C15orf61A6NNL5 157 aa13.51□□□□□ -0.25
TPM1-228ENST00000560975 MORN5Q5VZ52 161 aa13.51□□□□□ -0.25
TPM1-228ENST00000560975 NUDT11Q96G61 164 aa13.51□□□□□ -0.25
TPM1-228ENST00000560975 BPIFB3P59826 476 aa13.5□□□□□ -0.25
TPM1-228ENST00000560975 DUSP13Q9UII6 198 aa13.5□□□□□ -0.25
TPM1-228ENST00000560975 HIGD1CA8MV81 97 aa13.5□□□□□ -0.25
TPM1-228ENST00000560975 ADH4P08319 380 aa13.5□□□□□ -0.25
TPM1-228ENST00000560975 UBE2L3P68036 154 aaKnown RBP13.5□□□□□ -0.25
TPM1-228ENST00000560975 RAB30Q15771 203 aa13.5□□□□□ -0.25
TPM1-228ENST00000560975 OR9G1Q8NH87 305 aa13.5□□□□□ -0.25
TPM1-228ENST00000560975 COMMD5Q9GZQ3 224 aa13.5□□□□□ -0.25
TPM1-228ENST00000560975 HSPE1P61604 102 aaKnown RBP13.5□□□□□ -0.25
TPM1-228ENST00000560975 MRPL49Q13405 166 aaKnown RBP13.5□□□□□ -0.25
TPM1-228ENST00000560975 SLC25A34Q6PIV7 304 aa13.5□□□□□ -0.25
TPM1-228ENST00000560975 WDR82Q6UXN9 313 aa13.5□□□□□ -0.25
TPM1-228ENST00000560975 KLF14Q8TD94 323 aaPredicted RBP13.5□□□□□ -0.25
TPM1-228ENST00000560975 ZPBPQ9BS86 351 aa13.5□□□□□ -0.25
TPM1-228ENST00000560975 B4GALT7Q9UBV7 327 aa13.5□□□□□ -0.25
TPM1-228ENST00000560975 A0A087X0K7 114 aa13.49□□□□□ -0.25
TPM1-228ENST00000560975 TRGV8A0A0C4DH27 118 aa13.49□□□□□ -0.25
TPM1-228ENST00000560975 PSG9Q00887 426 aa13.49□□□□□ -0.25
TPM1-228ENST00000560975 KLF5Q13887 457 aaPredicted RBP13.49□□□□□ -0.25
TPM1-228ENST00000560975 CD177Q8N6Q3 437 aa13.49□□□□□ -0.25
TPM1-228ENST00000560975 OR2V2Q96R30 315 aa13.49□□□□□ -0.25
TPM1-228ENST00000560975 PMCHL2Q9BQD1 86 aa13.49□□□□□ -0.25
TPM1-228ENST00000560975 FAM173AQ9BQD7 235 aa13.49□□□□□ -0.25
TPM1-228ENST00000560975 TAS2R45P59539 299 aa13.49□□□□□ -0.25
TPM1-228ENST00000560975 WIPF2Q8TF74 440 aaPredicted RBP13.49□□□□□ -0.25
TPM1-228ENST00000560975 TTTY12Q9BZ98 90 aa13.49□□□□□ -0.25
TPM1-228ENST00000560975 IQCF6A8MYZ5 107 aa13.48□□□□□ -0.25
TPM1-228ENST00000560975 VWC2LB2RUY7 222 aa13.48□□□□□ -0.25
TPM1-228ENST00000560975 C21orf140B9A014 251 aa13.48□□□□□ -0.25
TPM1-228ENST00000560975 PYYP10082 97 aa13.48□□□□□ -0.25
TPM1-228ENST00000560975 GABRA6Q16445 453 aa13.48□□□□□ -0.25
TPM1-228ENST00000560975 TCF24Q7RTU0 167 aa13.48□□□□□ -0.25
TPM1-228ENST00000560975 DEFB125Q8N687 156 aa13.48□□□□□ -0.25
TPM1-228ENST00000560975 CORO2AQ92828 525 aa13.48□□□□□ -0.25
TPM1-228ENST00000560975 ST20Q9HBF5 79 aa13.48□□□□□ -0.25
TPM1-228ENST00000560975 GAGE12BA1L429 117 aa13.48□□□□□ -0.25
TPM1-228ENST00000560975 SYS1-DBNDD2H3BUS1 97 aa13.48□□□□□ -0.25
TPM1-228ENST00000560975 SNAI2O43623 268 aa13.48□□□□□ -0.25
TPM1-228ENST00000560975 LYZL6O75951 148 aa13.48□□□□□ -0.25
TPM1-228ENST00000560975 TOX4O94842 621 aa13.48□□□□□ -0.25
TPM1-228ENST00000560975 RIPPLY3P57055 190 aa13.48□□□□□ -0.25
TPM1-228ENST00000560975 FAM120AOSQ5T036 256 aa13.48□□□□□ -0.25
TPM1-228ENST00000560975 LINC00696Q6ZRV3 163 aa13.48□□□□□ -0.25
TPM1-228ENST00000560975 TMEM251Q8N6I4 163 aa13.48□□□□□ -0.25
TPM1-228ENST00000560975 GRAMD2BQ96HH9 432 aa13.48□□□□□ -0.25
TPM1-228ENST00000560975 CSTL1Q9H114 145 aa13.48□□□□□ -0.25
TPM1-228ENST00000560975 AMMECR1Q9Y4X0 333 aaPredicted RBP13.48□□□□□ -0.25
TPM1-228ENST00000560975 TRAV8-6A0A0B4J262 113 aa13.47□□□□□ -0.25
TPM1-228ENST00000560975 A0A1W2PRE2 83 aa13.47□□□□□ -0.25
TPM1-228ENST00000560975 C8orf88P0DMB2 117 aa13.47□□□□□ -0.25
TPM1-228ENST00000560975 SPEM1Q8N4L4 309 aa13.47□□□□□ -0.25
TPM1-228ENST00000560975 MBD6Q96DN6 1003 aa13.47□□□□□ -0.25
TPM1-228ENST00000560975 IFI27L2Q9H2X8 130 aa13.47□□□□□ -0.25
TPM1-228ENST00000560975 OR51B2Q9Y5P1 312 aa13.47□□□□□ -0.25
TPM1-228ENST00000560975 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.47□□□□□ -0.25
TPM1-228ENST00000560975 OR4S2Q8NH73 311 aa13.47□□□□□ -0.25
TPM1-228ENST00000560975 IGHV1-24A0A0C4DH33 117 aa13.46□□□□□ -0.25
TPM1-228ENST00000560975 HSBP1L1C9JCN9 74 aa13.46□□□□□ -0.25
TPM1-228ENST00000560975 TNFSF15O95150 251 aa13.46□□□□□ -0.25
TPM1-228ENST00000560975 LEPROTL1O95214 131 aa13.46□□□□□ -0.25
TPM1-228ENST00000560975 FABP6P51161 128 aa13.46□□□□□ -0.25
TPM1-228ENST00000560975 GNG5P63218 68 aa13.46□□□□□ -0.25
TPM1-228ENST00000560975 SMIM21Q3B7S5 101 aa13.46□□□□□ -0.25
TPM1-228ENST00000560975 SSX8Q7RTT4 187 aa13.46□□□□□ -0.25
TPM1-228ENST00000560975 SLC25A33Q9BSK2 321 aa13.46□□□□□ -0.25
TPM1-228ENST00000560975 IDI2-AS1Q9NZ38 188 aa13.46□□□□□ -0.25
TPM1-228ENST00000560975 RPH3ALQ9UNE2 315 aa13.46□□□□□ -0.25
TPM1-228ENST00000560975 SAP30O75446 220 aa13.46□□□□□ -0.25
TPM1-228ENST00000560975 ZNF137PP52743 207 aa13.46□□□□□ -0.25
TPM1-228ENST00000560975 ZNF138P52744 262 aa13.46□□□□□ -0.25
TPM1-228ENST00000560975 HES3Q5TGS1 186 aa13.46□□□□□ -0.25
TPM1-228ENST00000560975 LRRC29Q8WV35 223 aa13.46□□□□□ -0.25
TPM1-228ENST00000560975 MEGF9Q9H1U4 602 aa13.46□□□□□ -0.25
TPM1-228ENST00000560975 IGHV3OR15-7A0A075B7D8 119 aa13.46□□□□□ -0.26
TPM1-228ENST00000560975 J3QR06 171 aa13.46□□□□□ -0.26
TPM1-228ENST00000560975 TIMM8AO60220 97 aaPredicted RBP13.46□□□□□ -0.26
TPM1-228ENST00000560975 AGFG2O95081 481 aa13.46□□□□□ -0.26
TPM1-228ENST00000560975 CFIP05156 583 aa13.46□□□□□ -0.26
TPM1-228ENST00000560975 PRDX2P32119 198 aa13.46□□□□□ -0.26
TPM1-228ENST00000560975 FOXE3Q13461 319 aa13.46□□□□□ -0.26
TPM1-228ENST00000560975 RASL11AQ6T310 242 aa13.46□□□□□ -0.26
TPM1-228ENST00000560975 PRR7Q8TB68 274 aa13.46□□□□□ -0.26
TPM1-228ENST00000560975 TMEM14BQ9NUH8 114 aa13.46□□□□□ -0.26
TPM1-228ENST00000560975 MRPS17Q9Y2R5 130 aaKnown RBP13.46□□□□□ -0.26
TPM1-228ENST00000560975 ARFGEF3Q5TH69 2177 aa13.45□□□□□ -0.26
TPM1-228ENST00000560975 IGFBP4P22692 258 aa13.45□□□□□ -0.26
TPM1-228ENST00000560975 FAM90A1Q86YD7 464 aa13.45□□□□□ -0.26
TPM1-228ENST00000560975 CXXC4Q9H2H0 198 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms