RNA–Protein interactions for RNA: ENST00000560881.5

RPL28-211, Transcript of ribosomal protein L28, humanhuman

TSL 5

Gene RPL28, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-211ENST00000560881 NBEAL1Q6ZS30 2694 aa12.89□□□□□ -0.35
RPL28-211ENST00000560881 TRBV9A0A0B4J1U6 114 aa12.89□□□□□ -0.35
RPL28-211ENST00000560881 LGALS1P09382 135 aaKnown RBP12.89□□□□□ -0.35
RPL28-211ENST00000560881 S100A11P31949 105 aa12.89□□□□□ -0.35
RPL28-211ENST00000560881 MRPL41Q8IXM3 137 aaKnown RBP12.89□□□□□ -0.35
RPL28-211ENST00000560881 LINC00518Q8N0U6 118 aa12.89□□□□□ -0.35
RPL28-211ENST00000560881 LGI3Q8N145 548 aa12.89□□□□□ -0.35
RPL28-211ENST00000560881 IL22RA2Q969J5 263 aa12.89□□□□□ -0.35
RPL28-211ENST00000560881 S4R3C0 116 aa12.89□□□□□ -0.35
RPL28-211ENST00000560881 NOTCH3Q9UM47 2321 aa12.89□□□□□ -0.35
RPL28-211ENST00000560881 IGHV4OR15-8A0A075B7B6 117 aa12.88□□□□□ -0.35
RPL28-211ENST00000560881 A0A087WW49 117 aa12.88□□□□□ -0.35
RPL28-211ENST00000560881 C13orf42A0A1B0GVH6 325 aa12.88□□□□□ -0.35
RPL28-211ENST00000560881 HLA-AP01891 365 aaKnown RBP12.88□□□□□ -0.35
RPL28-211ENST00000560881 OR4E1P0C645 316 aa12.88□□□□□ -0.35
RPL28-211ENST00000560881 DEFA4P12838 97 aa12.88□□□□□ -0.35
RPL28-211ENST00000560881 PRCDQ00LT1 54 aa12.88□□□□□ -0.35
RPL28-211ENST00000560881 FLI1Q01543 452 aaPredicted RBP12.88□□□□□ -0.35
RPL28-211ENST00000560881 ZNF429Q86V71 674 aa12.88□□□□□ -0.35
RPL28-211ENST00000560881 LINC00482Q8N8I6 264 aa12.88□□□□□ -0.35
RPL28-211ENST00000560881 OR52B4Q8NGK2 314 aa12.88□□□□□ -0.35
RPL28-211ENST00000560881 CXorf58Q96LI9 332 aa12.88□□□□□ -0.35
RPL28-211ENST00000560881 C9orf170A2RU37 121 aa12.87□□□□□ -0.35
RPL28-211ENST00000560881 MPTX1A8MV57 137 aa12.87□□□□□ -0.35
RPL28-211ENST00000560881 NDUFB8O95169 186 aa12.87□□□□□ -0.35
RPL28-211ENST00000560881 BRI3O95415 125 aa12.87□□□□□ -0.35
RPL28-211ENST00000560881 IFNA17P01571 189 aa12.87□□□□□ -0.35
RPL28-211ENST00000560881 TRBV12-3P01733 135 aa12.87□□□□□ -0.35
RPL28-211ENST00000560881 IGHV3-23P01764 117 aa12.87□□□□□ -0.35
RPL28-211ENST00000560881 MFAP2P55001 183 aa12.87□□□□□ -0.35
RPL28-211ENST00000560881 HSPE1P61604 102 aaKnown RBP12.87□□□□□ -0.35
RPL28-211ENST00000560881 RUNX1Q01196 453 aa12.87□□□□□ -0.35
RPL28-211ENST00000560881 DHRS2Q13268 280 aa12.87□□□□□ -0.35
RPL28-211ENST00000560881 C15orf32Q32M92 178 aa12.87□□□□□ -0.35
RPL28-211ENST00000560881 NMSQ5H8A3 153 aa12.87□□□□□ -0.35
RPL28-211ENST00000560881 C11orf87Q6NUJ2 197 aa12.87□□□□□ -0.35
RPL28-211ENST00000560881 TMUB2Q71RG4 321 aa12.87□□□□□ -0.35
RPL28-211ENST00000560881 FAM219AQ8IW50 185 aa12.87□□□□□ -0.35
RPL28-211ENST00000560881 SRSF8Q9BRL6 282 aaKnown RBP12.87□□□□□ -0.35
RPL28-211ENST00000560881 IGLV11-55A0A075B6I3 123 aa12.86□□□□□ -0.35
RPL28-211ENST00000560881 A0A0B4J2A0 478 aa12.86□□□□□ -0.35
RPL28-211ENST00000560881 MYCNOSP40205 109 aa12.86□□□□□ -0.35
RPL28-211ENST00000560881 SRPXP78539 464 aa12.86□□□□□ -0.35
RPL28-211ENST00000560881 FHL3Q13643 280 aa12.86□□□□□ -0.35
RPL28-211ENST00000560881 C4orf46Q504U0 113 aa12.86□□□□□ -0.35
RPL28-211ENST00000560881 OR1N2Q8NGR9 330 aa12.86□□□□□ -0.35
RPL28-211ENST00000560881 SHPKQ9UHJ6 478 aa12.86□□□□□ -0.35
RPL28-211ENST00000560881 FBXL7Q9UJT9 491 aa12.86□□□□□ -0.35
RPL28-211ENST00000560881 A0A0G2JLM5 398 aa12.86□□□□□ -0.35
RPL28-211ENST00000560881 FAM223BA6NKX1 122 aa12.86□□□□□ -0.35
RPL28-211ENST00000560881 CD33P20138 364 aa12.86□□□□□ -0.35
RPL28-211ENST00000560881 SLURP1P55000 103 aa12.86□□□□□ -0.35
RPL28-211ENST00000560881 UBE2MP61081 183 aaKnown RBP12.86□□□□□ -0.35
RPL28-211ENST00000560881 ZNF616Q08AN1 781 aa12.86□□□□□ -0.35
RPL28-211ENST00000560881 C1QL4Q86Z23 238 aa12.86□□□□□ -0.35
RPL28-211ENST00000560881 FAM223AQ8IWN6 122 aa12.86□□□□□ -0.35
RPL28-211ENST00000560881 NECAP1Q8NC96 275 aa12.86□□□□□ -0.35
RPL28-211ENST00000560881 CLRN3Q8NCR9 226 aa12.86□□□□□ -0.35
RPL28-211ENST00000560881 SEC22CQ9BRL7 303 aa12.86□□□□□ -0.35
RPL28-211ENST00000560881 PDCD10Q9BUL8 212 aa12.86□□□□□ -0.35
RPL28-211ENST00000560881 PLEKHA3Q9HB20 300 aa12.86□□□□□ -0.35
RPL28-211ENST00000560881 B2MP61769 119 aa12.85□□□□□ -0.35
RPL28-211ENST00000560881 ATP5G2Q06055 141 aa12.85□□□□□ -0.35
RPL28-211ENST00000560881 LYG2Q86SG7 212 aa12.85□□□□□ -0.35
RPL28-211ENST00000560881 LRTM2Q8N967 370 aa12.85□□□□□ -0.35
RPL28-211ENST00000560881 COQ8AQ8NI60 647 aa12.85□□□□□ -0.35
RPL28-211ENST00000560881 MARC2Q969Z3 335 aa12.85□□□□□ -0.35
RPL28-211ENST00000560881 USMG5Q96IX5 58 aa12.85□□□□□ -0.35
RPL28-211ENST00000560881 SLC25A32Q9H2D1 315 aa12.85□□□□□ -0.35
RPL28-211ENST00000560881 F11RQ9Y624 299 aaKnown RBP12.85□□□□□ -0.35
RPL28-211ENST00000560881 IGHV3-21A0A0B4J1V1 117 aa12.84□□□□□ -0.35
RPL28-211ENST00000560881 G3V4G9 280 aa12.84□□□□□ -0.35
RPL28-211ENST00000560881 HOXB5P09067 269 aa12.84□□□□□ -0.35
RPL28-211ENST00000560881 IGLL1P15814 213 aa12.84□□□□□ -0.35
RPL28-211ENST00000560881 HOXA1P49639 335 aaPredicted RBP12.84□□□□□ -0.35
RPL28-211ENST00000560881 OXLD1Q5BKU9 147 aa12.84□□□□□ -0.35
RPL28-211ENST00000560881 ZNF343Q6P1L6 599 aa12.84□□□□□ -0.35
RPL28-211ENST00000560881 GSG1LQ6UXU4 331 aa12.84□□□□□ -0.35
RPL28-211ENST00000560881 OR2C3Q8N628 320 aa12.84□□□□□ -0.35
RPL28-211ENST00000560881 OR1S1Q8NH92 325 aa12.84□□□□□ -0.35
RPL28-211ENST00000560881 DPF1Q92782 380 aa12.84□□□□□ -0.35
RPL28-211ENST00000560881 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.84□□□□□ -0.35
RPL28-211ENST00000560881 LINC01619G3V211 115 aa12.83□□□□□ -0.35
RPL28-211ENST00000560881 DNASE2O00115 360 aaPredicted RBP12.83□□□□□ -0.35
RPL28-211ENST00000560881 ADAP1O75689 374 aa12.83□□□□□ -0.35
RPL28-211ENST00000560881 SMCO1Q147U7 214 aa12.83□□□□□ -0.35
RPL28-211ENST00000560881 AARDQ4LEZ3 155 aa12.83□□□□□ -0.35
RPL28-211ENST00000560881 SLC25A24Q6NUK1 477 aa12.83□□□□□ -0.35
RPL28-211ENST00000560881 HSPB1P04792 205 aaKnown RBP12.83□□□□□ -0.36
RPL28-211ENST00000560881 KLK9Q2XQG4 91 aa12.83□□□□□ -0.36
RPL28-211ENST00000560881 ALKAL2Q6UX46 152 aa12.83□□□□□ -0.36
RPL28-211ENST00000560881 WFDC9Q8NEX5 89 aa12.83□□□□□ -0.36
RPL28-211ENST00000560881 CCDC140Q96MF4 163 aa12.83□□□□□ -0.36
RPL28-211ENST00000560881 KLK9Q9UKQ9 250 aa12.83□□□□□ -0.36
RPL28-211ENST00000560881 FBN3Q75N90 2809 aa12.82□□□□□ -0.36
RPL28-211ENST00000560881 DUXBA0A1W2PPF3 345 aa12.82□□□□□ -0.36
RPL28-211ENST00000560881 PPP5D1E7EU14 171 aa12.82□□□□□ -0.36
RPL28-211ENST00000560881 DUS4LO95620 317 aaKnown RBP12.82□□□□□ -0.36
RPL28-211ENST00000560881 OR8U8P0C7N1 319 aa12.82□□□□□ -0.36
RPL28-211ENST00000560881 GGNBP1Q5YKI7 109 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms