RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 ZNF818PQ6ZRF7 136 aa12.91□□□□□ -0.34
TSPAN3-208ENST00000560514 UBE2DNLQ8IWF7 75 aa12.91□□□□□ -0.34
TSPAN3-208ENST00000560514 OR1L8Q8NGR8 309 aa12.91□□□□□ -0.34
TSPAN3-208ENST00000560514 VCX3AQ9NNX9 186 aa12.91□□□□□ -0.34
TSPAN3-208ENST00000560514 COMMD9Q9P000 198 aa12.91□□□□□ -0.34
TSPAN3-208ENST00000560514 A0A087WXM4 84 aa12.9□□□□□ -0.34
TSPAN3-208ENST00000560514 IFNA21P01568 189 aa12.9□□□□□ -0.34
TSPAN3-208ENST00000560514 IFNA17P01571 189 aa12.9□□□□□ -0.34
TSPAN3-208ENST00000560514 TAS2R46P59540 309 aa12.9□□□□□ -0.34
TSPAN3-208ENST00000560514 FXYD4P59646 89 aa12.9□□□□□ -0.34
TSPAN3-208ENST00000560514 HERV-K104P61576 105 aa12.9□□□□□ -0.34
TSPAN3-208ENST00000560514 ERVK-16P61578 105 aa12.9□□□□□ -0.34
TSPAN3-208ENST00000560514 WT1-ASQ06250 92 aa12.9□□□□□ -0.34
TSPAN3-208ENST00000560514 FAM90A2PQ658T7 463 aa12.9□□□□□ -0.34
TSPAN3-208ENST00000560514 MORN3Q6PF18 240 aaPredicted RBP12.9□□□□□ -0.34
TSPAN3-208ENST00000560514 LSM10Q969L4 123 aaKnown RBP12.9□□□□□ -0.34
TSPAN3-208ENST00000560514 DGCR14Q96DF8 476 aaKnown RBP12.9□□□□□ -0.34
TSPAN3-208ENST00000560514 YIPF6Q96EC8 236 aa12.9□□□□□ -0.34
TSPAN3-208ENST00000560514 GINS3Q9BRX5 216 aa12.9□□□□□ -0.34
TSPAN3-208ENST00000560514 IFT46Q9NQC8 304 aa12.9□□□□□ -0.34
TSPAN3-208ENST00000560514 F8W735 103 aaPredicted RBP12.89□□□□□ -0.35
TSPAN3-208ENST00000560514 ST8SIA3O43173 380 aa12.89□□□□□ -0.35
TSPAN3-208ENST00000560514 PGLYRP1O75594 196 aaPredicted RBP12.89□□□□□ -0.35
TSPAN3-208ENST00000560514 CTSGP08311 255 aa12.89□□□□□ -0.35
TSPAN3-208ENST00000560514 SPP1P10451 314 aa12.89□□□□□ -0.35
TSPAN3-208ENST00000560514 F2RP25116 425 aa12.89□□□□□ -0.35
TSPAN3-208ENST00000560514 AADACL3Q5VUY0 350 aa12.89□□□□□ -0.35
TSPAN3-208ENST00000560514 CMTM1Q8IZ96 169 aa12.89□□□□□ -0.35
TSPAN3-208ENST00000560514 OR6F1Q8NGZ6 308 aa12.89□□□□□ -0.35
TSPAN3-208ENST00000560514 MOB3AQ96BX8 217 aa12.89□□□□□ -0.35
TSPAN3-208ENST00000560514 OR10C1Q96KK4 312 aa12.89□□□□□ -0.35
TSPAN3-208ENST00000560514 MS4A6AQ9H2W1 248 aa12.89□□□□□ -0.35
TSPAN3-208ENST00000560514 PKD1P98161 4303 aa12.89□□□□□ -0.35
TSPAN3-208ENST00000560514 IGLV2-18A0A075B6J9 118 aa12.88□□□□□ -0.35
TSPAN3-208ENST00000560514 ELOA3CA0A087WX78 387 aaPredicted RBP12.88□□□□□ -0.35
TSPAN3-208ENST00000560514 TEX50A0A1B0GTY4 177 aa12.88□□□□□ -0.35
TSPAN3-208ENST00000560514 K7EIM0 57 aa12.88□□□□□ -0.35
TSPAN3-208ENST00000560514 NPY1RP25929 384 aa12.88□□□□□ -0.35
TSPAN3-208ENST00000560514 PRSS3P35030 304 aa12.88□□□□□ -0.35
TSPAN3-208ENST00000560514 RFX2P48378 723 aa12.88□□□□□ -0.35
TSPAN3-208ENST00000560514 TMEM69Q5SWH9 247 aa12.88□□□□□ -0.35
TSPAN3-208ENST00000560514 LPCAT3Q6P1A2 487 aa12.88□□□□□ -0.35
TSPAN3-208ENST00000560514 ZNF767PQ75MW2 155 aa12.88□□□□□ -0.35
TSPAN3-208ENST00000560514 DUSP18Q8NEJ0 188 aa12.88□□□□□ -0.35
TSPAN3-208ENST00000560514 TSPAN14Q8NG11 270 aa12.88□□□□□ -0.35
TSPAN3-208ENST00000560514 ZNF2Q9BSG1 426 aaPredicted RBP12.88□□□□□ -0.35
TSPAN3-208ENST00000560514 FAM212BQ9NTI7 297 aaPredicted RBP12.88□□□□□ -0.35
TSPAN3-208ENST00000560514 EHFQ9NZC4 300 aa12.88□□□□□ -0.35
TSPAN3-208ENST00000560514 RABAC1Q9UI14 185 aa12.88□□□□□ -0.35
TSPAN3-208ENST00000560514 ZNF705EA8MWA4 302 aaPredicted RBP12.87□□□□□ -0.35
TSPAN3-208ENST00000560514 TNFAIP8O95379 198 aa12.87□□□□□ -0.35
TSPAN3-208ENST00000560514 MFAP4P55083 255 aa12.87□□□□□ -0.35
TSPAN3-208ENST00000560514 TAS2R20P59543 309 aa12.87□□□□□ -0.35
TSPAN3-208ENST00000560514 TMEM17Q86X19 198 aa12.87□□□□□ -0.35
TSPAN3-208ENST00000560514 LYSMD2Q8IV50 215 aa12.87□□□□□ -0.35
TSPAN3-208ENST00000560514 MAPKAPK5-AS1Q8N8E1 139 aa12.87□□□□□ -0.35
TSPAN3-208ENST00000560514 SAMD12Q8N8I0 201 aa12.87□□□□□ -0.35
TSPAN3-208ENST00000560514 OR5H2Q8NGV7 314 aa12.87□□□□□ -0.35
TSPAN3-208ENST00000560514 OR51H1Q8NH63 302 aa12.87□□□□□ -0.35
TSPAN3-208ENST00000560514 SLC25A46Q96AG3 418 aa12.87□□□□□ -0.35
TSPAN3-208ENST00000560514 TMEM56Q96MV1 263 aa12.87□□□□□ -0.35
TSPAN3-208ENST00000560514 FKBP11Q9NYL4 201 aa12.87□□□□□ -0.35
TSPAN3-208ENST00000560514 TBC1D24Q9ULP9 559 aa12.87□□□□□ -0.35
TSPAN3-208ENST00000560514 AGRNO00468 2067 aa12.86□□□□□ -0.35
TSPAN3-208ENST00000560514 TRAV2A0A0B4J234 112 aa12.86□□□□□ -0.35
TSPAN3-208ENST00000560514 SMIM31A0A1B0GVY4 71 aa12.86□□□□□ -0.35
TSPAN3-208ENST00000560514 SNAPC5O75971 98 aa12.86□□□□□ -0.35
TSPAN3-208ENST00000560514 FCER2P06734 321 aa12.86□□□□□ -0.35
TSPAN3-208ENST00000560514 MISP3Q96FF7 219 aa12.86□□□□□ -0.35
TSPAN3-208ENST00000560514 NDUFA4L2Q9NRX3 87 aa12.86□□□□□ -0.35
TSPAN3-208ENST00000560514 TMEM14BQ9NUH8 114 aa12.86□□□□□ -0.35
TSPAN3-208ENST00000560514 MEIS3P1A6NDR6 274 aa12.85□□□□□ -0.35
TSPAN3-208ENST00000560514 MARCH11A6NNE9 402 aa12.85□□□□□ -0.35
TSPAN3-208ENST00000560514 GPR31O00270 319 aa12.85□□□□□ -0.35
TSPAN3-208ENST00000560514 GNG7O60262 68 aa12.85□□□□□ -0.35
TSPAN3-208ENST00000560514 APOA1P02647 267 aa12.85□□□□□ -0.35
TSPAN3-208ENST00000560514 PMP2P02689 132 aa12.85□□□□□ -0.35
TSPAN3-208ENST00000560514 S100GP29377 79 aa12.85□□□□□ -0.35
TSPAN3-208ENST00000560514 C12orf74Q32Q52 190 aa12.85□□□□□ -0.35
TSPAN3-208ENST00000560514 TRPT1Q86TN4 253 aaKnown RBP12.85□□□□□ -0.35
TSPAN3-208ENST00000560514 GPX8Q8TED1 209 aa12.85□□□□□ -0.35
TSPAN3-208ENST00000560514 ST8SIA2Q92186 375 aa12.85□□□□□ -0.35
TSPAN3-208ENST00000560514 ZNF414Q96IQ9 312 aa12.85□□□□□ -0.35
TSPAN3-208ENST00000560514 TXN2Q99757 166 aa12.85□□□□□ -0.35
TSPAN3-208ENST00000560514 NXF2Q9GZY0 626 aaKnown RBP12.85□□□□□ -0.35
TSPAN3-208ENST00000560514 TMEM231Q9H6L2 316 aa12.85□□□□□ -0.35
TSPAN3-208ENST00000560514 SCPEP1Q9HB40 452 aa12.85□□□□□ -0.35
TSPAN3-208ENST00000560514 CLEC5AQ9NY25 188 aa12.85□□□□□ -0.35
TSPAN3-208ENST00000560514 CELA1Q9UNI1 258 aa12.85□□□□□ -0.35
TSPAN3-208ENST00000560514 OR51B2Q9Y5P1 312 aa12.85□□□□□ -0.35
TSPAN3-208ENST00000560514 X6R8D5 127 aa12.85□□□□□ -0.35
TSPAN3-208ENST00000560514 C16orf90A8MZG2 172 aa12.84□□□□□ -0.35
TSPAN3-208ENST00000560514 GIG44P09565 113 aaPredicted RBP12.84□□□□□ -0.35
TSPAN3-208ENST00000560514 LPAR6P43657 344 aa12.84□□□□□ -0.35
TSPAN3-208ENST00000560514 C1orf134Q5TEV5 83 aa12.84□□□□□ -0.35
TSPAN3-208ENST00000560514 OR1P1Q8NH06 330 aa12.84□□□□□ -0.35
TSPAN3-208ENST00000560514 PRNDQ9UKY0 176 aa12.84□□□□□ -0.35
TSPAN3-208ENST00000560514 IGHV3-66A0A0C4DH42 116 aa12.83□□□□□ -0.36
TSPAN3-208ENST00000560514 TGFBR1P36897 503 aa12.83□□□□□ -0.36
TSPAN3-208ENST00000560514 UCP3P55916 312 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms