RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 DEFB113Q30KQ7 82 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 LCN15Q6UWW0 184 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 ZNF562Q6V9R5 426 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 PSMG3-AS1Q96PY0 264 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 SEC11CQ9BY50 192 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 EIF5A2Q9GZV4 153 aaKnown RBP10.09□□□□□ -0.79
USP3-213ENST00000559711 FNDC4Q9H6D8 234 aaPredicted RBP10.09□□□□□ -0.79
USP3-213ENST00000559711 SLC45A2Q9UMX9 530 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 CARHSP1Q9Y2V2 147 aaKnown RBP10.09□□□□□ -0.79
USP3-213ENST00000559711 POLQO75417 2590 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 IGKV1OR2-108A0A075B7D4 117 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 MAP1LC3B2A6NCE7 125 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 CNIH1O95406 144 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 APOC3P02656 99 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 CRYGCP07315 174 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 MFAP2P55001 183 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 PRR20EP86478 221 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 PRR20CP86479 221 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 PRR20DP86480 221 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 PRR20BP86481 221 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 PRR20AP86496 221 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 FAM120AOSQ5T036 256 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 MIC13Q5XKP0 118 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 SLC35E1Q96K37 410 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 MAP1LC3BQ9GZQ8 125 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 C1RLQ9NZP8 487 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 F11RQ9Y624 299 aaKnown RBP10.09□□□□□ -0.79
USP3-213ENST00000559711 ABCA2Q9BZC7 2435 aa10.09□□□□□ -0.79
USP3-213ENST00000559711 MAP1AP78559 2803 aaPredicted RBP10.08□□□□□ -0.8
USP3-213ENST00000559711 NAV2Q8IVL1 2488 aa10.08□□□□□ -0.8
USP3-213ENST00000559711 VPS13CQ709C8 3753 aa10.08□□□□□ -0.8
USP3-213ENST00000559711 NCBP2LA6PVI3 153 aaKnown RBP10.08□□□□□ -0.8
USP3-213ENST00000559711 F8W036 122 aa10.08□□□□□ -0.8
USP3-213ENST00000559711 SFTA3P0C7M3 94 aa10.08□□□□□ -0.8
USP3-213ENST00000559711 LINC00869P0C866 280 aa10.08□□□□□ -0.8
USP3-213ENST00000559711 B2MP61769 119 aa10.08□□□□□ -0.8
USP3-213ENST00000559711 LOXL1Q08397 574 aaPredicted RBP10.08□□□□□ -0.8
USP3-213ENST00000559711 FXYD3Q14802 87 aa10.08□□□□□ -0.8
USP3-213ENST00000559711 TMEM249Q2WGJ8 235 aa10.08□□□□□ -0.8
USP3-213ENST00000559711 ZNF506Q5JVG8 444 aa10.08□□□□□ -0.8
USP3-213ENST00000559711 ETFRF1Q6IPR1 90 aa10.08□□□□□ -0.8
USP3-213ENST00000559711 OR2T6Q8NHC8 308 aa10.08□□□□□ -0.8
USP3-213ENST00000559711 SSMEM1Q8WWF3 244 aa10.08□□□□□ -0.8
USP3-213ENST00000559711 RAB24Q969Q5 203 aa10.08□□□□□ -0.8
USP3-213ENST00000559711 RARRES2Q99969 163 aa10.08□□□□□ -0.8
USP3-213ENST00000559711 C7orf69Q9H7B7 122 aa10.08□□□□□ -0.8
USP3-213ENST00000559711 HIF1ANQ9NWT6 349 aa10.08□□□□□ -0.8
USP3-213ENST00000559711 CORTO00230 105 aa10.07□□□□□ -0.8
USP3-213ENST00000559711 CTRB1P17538 263 aa10.07□□□□□ -0.8
USP3-213ENST00000559711 CX3CL1P78423 397 aa10.07□□□□□ -0.8
USP3-213ENST00000559711 GCSAMLQ5JQS6 135 aa10.07□□□□□ -0.8
USP3-213ENST00000559711 CTRB2Q6GPI1 263 aa10.07□□□□□ -0.8
USP3-213ENST00000559711 FAM122CQ6P4D5 195 aa10.07□□□□□ -0.8
USP3-213ENST00000559711 STPG3Q8N7X2 389 aa10.07□□□□□ -0.8
USP3-213ENST00000559711 Q8N9W7 124 aa10.07□□□□□ -0.8
USP3-213ENST00000559711 LINC01356Q8N9X3 169 aa10.07□□□□□ -0.8
USP3-213ENST00000559711 MBD6Q96DN6 1003 aa10.07□□□□□ -0.8
USP3-213ENST00000559711 SLC35B3Q9H1N7 401 aa10.07□□□□□ -0.8
USP3-213ENST00000559711 MEGF9Q9H1U4 602 aa10.07□□□□□ -0.8
USP3-213ENST00000559711 SLC25A22Q9H936 323 aa10.07□□□□□ -0.8
USP3-213ENST00000559711 ABCA12Q86UK0 2595 aa10.06□□□□□ -0.8
USP3-213ENST00000559711 TRAV40A0A0B4J280 105 aa10.06□□□□□ -0.8
USP3-213ENST00000559711 TSPAN9O75954 239 aa10.06□□□□□ -0.8
USP3-213ENST00000559711 APELAP0DMC3 54 aa10.06□□□□□ -0.8
USP3-213ENST00000559711 OR10J1P30954 320 aa10.06□□□□□ -0.8
USP3-213ENST00000559711 CDC34P49427 236 aaPredicted RBP10.06□□□□□ -0.8
USP3-213ENST00000559711 FGF8P55075 233 aaPredicted RBP10.06□□□□□ -0.8
USP3-213ENST00000559711 ICAM4Q14773 271 aa10.06□□□□□ -0.8
USP3-213ENST00000559711 KHDC3LQ587J8 217 aa10.06□□□□□ -0.8
USP3-213ENST00000559711 RUSC1-AS1Q66K80 236 aa10.06□□□□□ -0.8
USP3-213ENST00000559711 THAP8Q8NA92 274 aa10.06□□□□□ -0.8
USP3-213ENST00000559711 DMRT1Q9Y5R6 373 aa10.06□□□□□ -0.8
USP3-213ENST00000559711 LOC102723971A0A1B0GUV8 181 aa10.06□□□□□ -0.8
USP3-213ENST00000559711 HLA-DRB1P01911 266 aa10.06□□□□□ -0.8
USP3-213ENST00000559711 HSPB1P04792 205 aaKnown RBP10.06□□□□□ -0.8
USP3-213ENST00000559711 IGHV4-38-2P0DP08 117 aa10.06□□□□□ -0.8
USP3-213ENST00000559711 PPT1P50897 306 aa10.06□□□□□ -0.8
USP3-213ENST00000559711 HAGHQ16775 308 aa10.06□□□□□ -0.8
USP3-213ENST00000559711 C19orf35Q6ZS72 473 aa10.06□□□□□ -0.8
USP3-213ENST00000559711 TMEM116Q8NCL8 245 aa10.06□□□□□ -0.8
USP3-213ENST00000559711 OR1L6Q8NGR2 347 aa10.06□□□□□ -0.8
USP3-213ENST00000559711 NPIPB3Q92617 1050 aa10.06□□□□□ -0.8
USP3-213ENST00000559711 ARPC1AQ92747 370 aa10.06□□□□□ -0.8
USP3-213ENST00000559711 MISP3Q96FF7 219 aa10.06□□□□□ -0.8
USP3-213ENST00000559711 ACY3Q96HD9 319 aa10.06□□□□□ -0.8
USP3-213ENST00000559711 WNT10AQ9GZT5 417 aa10.06□□□□□ -0.8
USP3-213ENST00000559711 GNG13Q9P2W3 67 aa10.06□□□□□ -0.8
USP3-213ENST00000559711 HELZ2Q9BYK8 2649 aaKnown RBP10.05□□□□□ -0.8
USP3-213ENST00000559711 IGHV3OR16-10A0A075B7F0 116 aa10.05□□□□□ -0.8
USP3-213ENST00000559711 A0A1W2PPV4 95 aa10.05□□□□□ -0.8
USP3-213ENST00000559711 NPIPB5A8MRT5 1133 aa10.05□□□□□ -0.8
USP3-213ENST00000559711 PLXNB1O43157 2135 aa10.05□□□□□ -0.8
USP3-213ENST00000559711 EIF3GO75821 320 aaKnown RBP eCLIP10.05□□□□□ -0.8
USP3-213ENST00000559711 SCO1O75880 301 aa10.05□□□□□ -0.8
USP3-213ENST00000559711 BCL2P10415 239 aa10.05□□□□□ -0.8
USP3-213ENST00000559711 DEFA5Q01523 94 aa10.05□□□□□ -0.8
USP3-213ENST00000559711 PRSS57Q6UWY2 283 aa10.05□□□□□ -0.8
USP3-213ENST00000559711 BRD3OSQ6XYD6 125 aa10.05□□□□□ -0.8
USP3-213ENST00000559711 SVBPQ8N300 66 aa10.05□□□□□ -0.8
USP3-213ENST00000559711 PIFOQ8TCI5 191 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms