RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 A0A0B4J293 547 aa11.23□□□□□ -0.61
SMAD6-203ENST00000558937 IGHV7-4-1A0A0J9YVY3 117 aa11.23□□□□□ -0.61
SMAD6-203ENST00000558937 GABARAPH6UMI1 98 aa11.23□□□□□ -0.61
SMAD6-203ENST00000558937 CTDSP2O14595 271 aa11.23□□□□□ -0.61
SMAD6-203ENST00000558937 RGS5O15539 181 aa11.23□□□□□ -0.61
SMAD6-203ENST00000558937 ST8SIA3O43173 380 aa11.23□□□□□ -0.61
SMAD6-203ENST00000558937 TRIM16LQ309B1 348 aa11.23□□□□□ -0.61
SMAD6-203ENST00000558937 SP6Q3SY56 376 aa11.23□□□□□ -0.61
SMAD6-203ENST00000558937 FAAP20Q6NZ36 180 aa11.23□□□□□ -0.61
SMAD6-203ENST00000558937 STEAP1BQ6NZ63 245 aa11.23□□□□□ -0.61
SMAD6-203ENST00000558937 TERB2Q8NHR7 220 aa11.23□□□□□ -0.61
SMAD6-203ENST00000558937 IL17DQ8TAD2 202 aa11.23□□□□□ -0.61
SMAD6-203ENST00000558937 ZFAND1Q8TCF1 268 aa11.23□□□□□ -0.61
SMAD6-203ENST00000558937 MARCH1Q8TCQ1 289 aa11.23□□□□□ -0.61
SMAD6-203ENST00000558937 OVOL2Q9BRP0 275 aa11.23□□□□□ -0.61
SMAD6-203ENST00000558937 STARD9Q9P2P6 4700 aa11.23□□□□□ -0.61
SMAD6-203ENST00000558937 IGHV3-49A0A0A0MS15 119 aa11.22□□□□□ -0.61
SMAD6-203ENST00000558937 A0A0G2JRQ6 117 aa11.22□□□□□ -0.61
SMAD6-203ENST00000558937 OR4C46A6NHA9 309 aa11.22□□□□□ -0.61
SMAD6-203ENST00000558937 GNG7O60262 68 aa11.22□□□□□ -0.61
SMAD6-203ENST00000558937 ATG12O94817 140 aa11.22□□□□□ -0.61
SMAD6-203ENST00000558937 YIF1AO95070 293 aa11.22□□□□□ -0.61
SMAD6-203ENST00000558937 UCP1P25874 307 aa11.22□□□□□ -0.61
SMAD6-203ENST00000558937 MRPS10P82664 201 aaKnown RBP11.22□□□□□ -0.61
SMAD6-203ENST00000558937 SSBP1Q04837 148 aaKnown RBP11.22□□□□□ -0.61
SMAD6-203ENST00000558937 CLVS1Q8IUQ0 354 aaPredicted RBP11.22□□□□□ -0.61
SMAD6-203ENST00000558937 OR10C1Q96KK4 312 aa11.22□□□□□ -0.61
SMAD6-203ENST00000558937 RNF2Q99496 336 aa11.22□□□□□ -0.61
SMAD6-203ENST00000558937 RHPN1-AS1Q9BWJ2 59 aa11.22□□□□□ -0.61
SMAD6-203ENST00000558937 NXF2Q9GZY0 626 aaKnown RBP11.22□□□□□ -0.61
SMAD6-203ENST00000558937 SACSQ9NZJ4 4579 aa11.21□□□□□ -0.61
SMAD6-203ENST00000558937 INS-IGF2F8WCM5 200 aa11.21□□□□□ -0.61
SMAD6-203ENST00000558937 CHEK1O14757 476 aa11.21□□□□□ -0.61
SMAD6-203ENST00000558937 IFNA17P01571 189 aa11.21□□□□□ -0.61
SMAD6-203ENST00000558937 HOXA1P49639 335 aaPredicted RBP11.21□□□□□ -0.61
SMAD6-203ENST00000558937 TMEM116Q8NCL8 245 aa11.21□□□□□ -0.61
SMAD6-203ENST00000558937 SMIM4Q8WVI0 70 aa11.21□□□□□ -0.61
SMAD6-203ENST00000558937 PDCD10Q9BUL8 212 aa11.21□□□□□ -0.61
SMAD6-203ENST00000558937 RYR2Q92736 4967 aa11.21□□□□□ -0.61
SMAD6-203ENST00000558937 IGHV3OR16-13A0A075B7E8 117 aa11.2□□□□□ -0.62
SMAD6-203ENST00000558937 IGHV3-74A0A0B4J1X5 117 aa11.2□□□□□ -0.62
SMAD6-203ENST00000558937 RNASE2P10153 161 aaKnown RBP11.2□□□□□ -0.62
SMAD6-203ENST00000558937 SNCAP37840 140 aa11.2□□□□□ -0.62
SMAD6-203ENST00000558937 ETV6P41212 452 aa11.2□□□□□ -0.62
SMAD6-203ENST00000558937 APOC4P55056 127 aa11.2□□□□□ -0.62
SMAD6-203ENST00000558937 MEF2DQ14814 521 aa11.2□□□□□ -0.62
SMAD6-203ENST00000558937 RNASE11Q8TAA1 199 aaKnown RBP11.2□□□□□ -0.62
SMAD6-203ENST00000558937 RRNAD1Q96FB5 475 aaKnown RBP11.2□□□□□ -0.62
SMAD6-203ENST00000558937 CCDC59Q9P031 241 aaKnown RBP11.2□□□□□ -0.62
SMAD6-203ENST00000558937 C14orf166Q9Y224 244 aaKnown RBP11.2□□□□□ -0.62
SMAD6-203ENST00000558937 DISC1C4P0D8 188 aa11.19□□□□□ -0.62
SMAD6-203ENST00000558937 B3GALNT1O75752 331 aa11.19□□□□□ -0.62
SMAD6-203ENST00000558937 OR5AC1P0C628 307 aa11.19□□□□□ -0.62
SMAD6-203ENST00000558937 RPL35AP18077 110 aaKnown RBP11.19□□□□□ -0.62
SMAD6-203ENST00000558937 NPBWR1P48145 328 aa11.19□□□□□ -0.62
SMAD6-203ENST00000558937 IL18Q14116 193 aa11.19□□□□□ -0.62
SMAD6-203ENST00000558937 PVRIGQ6DKI7 326 aa11.19□□□□□ -0.62
SMAD6-203ENST00000558937 TOMM20LQ6UXN7 152 aa11.19□□□□□ -0.62
SMAD6-203ENST00000558937 DUSP18Q8NEJ0 188 aa11.19□□□□□ -0.62
SMAD6-203ENST00000558937 OR4C16Q8NGL9 310 aa11.19□□□□□ -0.62
SMAD6-203ENST00000558937 LHFPL5Q8TAF8 219 aa11.19□□□□□ -0.62
SMAD6-203ENST00000558937 DYNC2LI1Q8TCX1 351 aa11.19□□□□□ -0.62
SMAD6-203ENST00000558937 RAB2BQ8WUD1 216 aa11.19□□□□□ -0.62
SMAD6-203ENST00000558937 RTBDNQ9BSG5 229 aaPredicted RBP11.19□□□□□ -0.62
SMAD6-203ENST00000558937 TMEM222Q9H0R3 208 aa11.19□□□□□ -0.62
SMAD6-203ENST00000558937 NAA60Q9H7X0 242 aa11.19□□□□□ -0.62
SMAD6-203ENST00000558937 CSMD3Q7Z407 3707 aa11.19□□□□□ -0.62
SMAD6-203ENST00000558937 IGKV3-7A0A075B6H7 116 aa11.18□□□□□ -0.62
SMAD6-203ENST00000558937 TRAV14DV4A0A0A6YYC5 116 aa11.18□□□□□ -0.62
SMAD6-203ENST00000558937 CORTO00230 105 aa11.18□□□□□ -0.62
SMAD6-203ENST00000558937 CTDSPLO15194 276 aa11.18□□□□□ -0.62
SMAD6-203ENST00000558937 AKAIN1P0CW23 69 aa11.18□□□□□ -0.62
SMAD6-203ENST00000558937 TFPI2P48307 235 aa11.18□□□□□ -0.62
SMAD6-203ENST00000558937 SURF2Q15527 256 aaPredicted RBP11.18□□□□□ -0.62
SMAD6-203ENST00000558937 DEFB135Q30KP9 77 aa11.18□□□□□ -0.62
SMAD6-203ENST00000558937 ZNF600Q6ZNG1 722 aa11.18□□□□□ -0.62
SMAD6-203ENST00000558937 Q6ZRM9 215 aa11.18□□□□□ -0.62
SMAD6-203ENST00000558937 Q6ZWC4 215 aa11.18□□□□□ -0.62
SMAD6-203ENST00000558937 DIRAS2Q96HU8 199 aa11.18□□□□□ -0.62
SMAD6-203ENST00000558937 BCL7BQ9BQE9 202 aa11.18□□□□□ -0.62
SMAD6-203ENST00000558937 GINS3Q9BRX5 216 aa11.18□□□□□ -0.62
SMAD6-203ENST00000558937 ZFAND3Q9H8U3 227 aa11.18□□□□□ -0.62
SMAD6-203ENST00000558937 ENY2Q9NPA8 101 aa11.18□□□□□ -0.62
SMAD6-203ENST00000558937 TP53TG1Q9Y2A0 90 aa11.18□□□□□ -0.62
SMAD6-203ENST00000558937 KIR2DL5BA0A0G2JN68 375 aa11.17□□□□□ -0.62
SMAD6-203ENST00000558937 KIR2DL5BA0A0G2JPC4 375 aa11.17□□□□□ -0.62
SMAD6-203ENST00000558937 TEX13DA0A0J9YY54 714 aaPredicted RBP11.17□□□□□ -0.62
SMAD6-203ENST00000558937 UBE2CO00762 179 aa11.17□□□□□ -0.62
SMAD6-203ENST00000558937 SPRY2O43597 315 aa11.17□□□□□ -0.62
SMAD6-203ENST00000558937 JTBO76095 146 aa11.17□□□□□ -0.62
SMAD6-203ENST00000558937 CDS2O95674 445 aa11.17□□□□□ -0.62
SMAD6-203ENST00000558937 TMEM50AO95807 157 aa11.17□□□□□ -0.62
SMAD6-203ENST00000558937 SUB1P53999 127 aaKnown RBP eCLIP11.17□□□□□ -0.62
SMAD6-203ENST00000558937 ZNF124Q15973 351 aa11.17□□□□□ -0.62
SMAD6-203ENST00000558937 FAM90A2PQ658T7 463 aa11.17□□□□□ -0.62
SMAD6-203ENST00000558937 TCF24Q7RTU0 167 aa11.17□□□□□ -0.62
SMAD6-203ENST00000558937 WFDC3Q8IUB2 231 aa11.17□□□□□ -0.62
SMAD6-203ENST00000558937 APRG1Q8IVJ8 170 aa11.17□□□□□ -0.62
SMAD6-203ENST00000558937 FAM219AQ8IW50 185 aa11.17□□□□□ -0.62
SMAD6-203ENST00000558937 KIR2DL5AQ8N109 375 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms