RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 ENY2Q9NPA8 101 aa11.54□□□□□ -0.56
RPL28-207ENST00000558815 C19orf73Q9NVV2 129 aa11.54□□□□□ -0.56
RPL28-207ENST00000558815 PRR13Q9NZ81 148 aa11.54□□□□□ -0.56
RPL28-207ENST00000558815 SCP2D1Q9UJQ7 156 aa11.54□□□□□ -0.56
RPL28-207ENST00000558815 CRYM-AS1A6NIL9 109 aa11.53□□□□□ -0.56
RPL28-207ENST00000558815 F8W735 103 aaPredicted RBP11.53□□□□□ -0.56
RPL28-207ENST00000558815 B3GALNT1O75752 331 aa11.53□□□□□ -0.56
RPL28-207ENST00000558815 MT-CO2P00403 227 aa11.53□□□□□ -0.56
RPL28-207ENST00000558815 MFAP4P55083 255 aa11.53□□□□□ -0.56
RPL28-207ENST00000558815 DHODHQ02127 395 aa11.53□□□□□ -0.56
RPL28-207ENST00000558815 SPSB3Q6PJ21 355 aa11.53□□□□□ -0.56
RPL28-207ENST00000558815 ZNF114Q8NC26 417 aa11.53□□□□□ -0.56
RPL28-207ENST00000558815 GLYATL2Q8WU03 294 aa11.53□□□□□ -0.56
RPL28-207ENST00000558815 ZNF436Q9C0F3 470 aaPredicted RBP11.53□□□□□ -0.56
RPL28-207ENST00000558815 RBM38Q9H0Z9 239 aaKnown RBP11.53□□□□□ -0.56
RPL28-207ENST00000558815 I3L2K1 104 aa11.52□□□□□ -0.57
RPL28-207ENST00000558815 NXPH3O95157 252 aa11.52□□□□□ -0.57
RPL28-207ENST00000558815 CDS2O95674 445 aa11.52□□□□□ -0.57
RPL28-207ENST00000558815 AKR1C4P17516 323 aa11.52□□□□□ -0.57
RPL28-207ENST00000558815 ADMP35318 185 aa11.52□□□□□ -0.57
RPL28-207ENST00000558815 Q6ZRM9 215 aa11.52□□□□□ -0.57
RPL28-207ENST00000558815 SELENOHQ8IZQ5 122 aaKnown RBP11.52□□□□□ -0.57
RPL28-207ENST00000558815 DEFB125Q8N687 156 aa11.52□□□□□ -0.57
RPL28-207ENST00000558815 RBPMSQ93062 196 aaKnown RBP11.52□□□□□ -0.57
RPL28-207ENST00000558815 MARC2Q969Z3 335 aa11.52□□□□□ -0.57
RPL28-207ENST00000558815 MRPL27Q9P0M9 148 aaKnown RBP11.52□□□□□ -0.57
RPL28-207ENST00000558815 V9GYH0 126 aa11.52□□□□□ -0.57
RPL28-207ENST00000558815 A8MZ25 164 aa11.51□□□□□ -0.57
RPL28-207ENST00000558815 NDUFA4O00483 81 aa11.51□□□□□ -0.57
RPL28-207ENST00000558815 NUPL2O15504 423 aaKnown RBP11.51□□□□□ -0.57
RPL28-207ENST00000558815 GNG7O60262 68 aa11.51□□□□□ -0.57
RPL28-207ENST00000558815 YIF1AO95070 293 aa11.51□□□□□ -0.57
RPL28-207ENST00000558815 FAUP35544 74 aaKnown RBP11.51□□□□□ -0.57
RPL28-207ENST00000558815 ELLP55199 621 aaPredicted RBP11.51□□□□□ -0.57
RPL28-207ENST00000558815 RBPMS2Q6ZRY4 209 aaKnown RBP11.51□□□□□ -0.57
RPL28-207ENST00000558815 TOMM5Q8N4H5 51 aa11.51□□□□□ -0.57
RPL28-207ENST00000558815 OR52B4Q8NGK2 314 aa11.51□□□□□ -0.57
RPL28-207ENST00000558815 TMEM230Q96A57 120 aa11.51□□□□□ -0.57
RPL28-207ENST00000558815 SCGB3A2Q96PL1 93 aa11.51□□□□□ -0.57
RPL28-207ENST00000558815 SRD5A3Q9H8P0 318 aa11.51□□□□□ -0.57
RPL28-207ENST00000558815 GAR1Q9NY12 217 aaKnown RBP11.51□□□□□ -0.57
RPL28-207ENST00000558815 CACNG5Q9UF02 275 aa11.51□□□□□ -0.57
RPL28-207ENST00000558815 OR11H12B2RN74 326 aa11.5□□□□□ -0.57
RPL28-207ENST00000558815 CTSGP08311 255 aa11.5□□□□□ -0.57
RPL28-207ENST00000558815 C8orf88P0DMB2 117 aa11.5□□□□□ -0.57
RPL28-207ENST00000558815 SUB1P53999 127 aaKnown RBP eCLIP11.5□□□□□ -0.57
RPL28-207ENST00000558815 KLF9Q13886 244 aaPredicted RBP11.5□□□□□ -0.57
RPL28-207ENST00000558815 ZNF79Q15937 498 aa11.5□□□□□ -0.57
RPL28-207ENST00000558815 HAGHQ16775 308 aa11.5□□□□□ -0.57
RPL28-207ENST00000558815 SLC16A13Q7RTY0 426 aa11.5□□□□□ -0.57
RPL28-207ENST00000558815 FAM219AQ8IW50 185 aa11.5□□□□□ -0.57
RPL28-207ENST00000558815 TRIM63Q969Q1 353 aa11.5□□□□□ -0.57
RPL28-207ENST00000558815 GPR146Q96CH1 333 aa11.5□□□□□ -0.57
RPL28-207ENST00000558815 ATP6V0BQ99437 205 aa11.5□□□□□ -0.57
RPL28-207ENST00000558815 TM2D3Q9BRN9 247 aa11.5□□□□□ -0.57
RPL28-207ENST00000558815 DAZ1Q9NQZ3 744 aaKnown RBP11.5□□□□□ -0.57
RPL28-207ENST00000558815 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.5□□□□□ -0.57
RPL28-207ENST00000558815 KCNIP3Q9Y2W7 256 aa11.5□□□□□ -0.57
RPL28-207ENST00000558815 IGHV3-49A0A0A0MS15 119 aa11.49□□□□□ -0.57
RPL28-207ENST00000558815 RNASE2P10153 161 aaKnown RBP11.49□□□□□ -0.57
RPL28-207ENST00000558815 AP3S2P59780 193 aa11.49□□□□□ -0.57
RPL28-207ENST00000558815 SPCS3P61009 180 aa11.49□□□□□ -0.57
RPL28-207ENST00000558815 RELQ04864 619 aaPredicted RBP11.49□□□□□ -0.57
RPL28-207ENST00000558815 TMEM187Q14656 261 aa11.49□□□□□ -0.57
RPL28-207ENST00000558815 TMED4Q7Z7H5 227 aa11.49□□□□□ -0.57
RPL28-207ENST00000558815 TXN2Q99757 166 aa11.49□□□□□ -0.57
RPL28-207ENST00000558815 CEBPZOSA8MTT3 80 aa11.48□□□□□ -0.57
RPL28-207ENST00000558815 OPRK1P41145 380 aa11.48□□□□□ -0.57
RPL28-207ENST00000558815 CCDC190Q86UF4 302 aa11.48□□□□□ -0.57
RPL28-207ENST00000558815 DUSP18Q8NEJ0 188 aa11.48□□□□□ -0.57
RPL28-207ENST00000558815 SPATA25Q9BR10 227 aa11.48□□□□□ -0.57
RPL28-207ENST00000558815 RETNQ9HD89 108 aa11.48□□□□□ -0.57
RPL28-207ENST00000558815 HEYLQ9NQ87 328 aaPredicted RBP11.48□□□□□ -0.57
RPL28-207ENST00000558815 TRAV25A0A0B4J276 109 aa11.47□□□□□ -0.57
RPL28-207ENST00000558815 INS-IGF2F8WCM5 200 aa11.47□□□□□ -0.57
RPL28-207ENST00000558815 ZNF701M0R085 212 aaPredicted RBP11.47□□□□□ -0.57
RPL28-207ENST00000558815 CORTO00230 105 aa11.47□□□□□ -0.57
RPL28-207ENST00000558815 SULT1A3P0DMM9 295 aa11.47□□□□□ -0.57
RPL28-207ENST00000558815 SULT1A4P0DMN0 295 aa11.47□□□□□ -0.57
RPL28-207ENST00000558815 ANXA3P12429 323 aa11.47□□□□□ -0.57
RPL28-207ENST00000558815 NPBWR1P48145 328 aa11.47□□□□□ -0.57
RPL28-207ENST00000558815 ANKRD55Q3KP44 614 aa11.47□□□□□ -0.57
RPL28-207ENST00000558815 SPANXN2Q5MJ10 180 aa11.47□□□□□ -0.57
RPL28-207ENST00000558815 LAMTOR1Q6IAA8 161 aa11.47□□□□□ -0.57
RPL28-207ENST00000558815 GALNT14Q96FL9 552 aa11.47□□□□□ -0.57
RPL28-207ENST00000558815 TMEM56-RWDD3S4R434 201 aa11.47□□□□□ -0.57
RPL28-207ENST00000558815 IGHV3OR16-13A0A075B7E8 117 aa11.46□□□□□ -0.57
RPL28-207ENST00000558815 IGHV3-74A0A0B4J1X5 117 aa11.46□□□□□ -0.57
RPL28-207ENST00000558815 RBMY1BA6NDE4 496 aaKnown RBP11.46□□□□□ -0.57
RPL28-207ENST00000558815 RBMY1EA6NEQ0 496 aaKnown RBP11.46□□□□□ -0.57
RPL28-207ENST00000558815 C15orf62A8K5M9 175 aa11.46□□□□□ -0.57
RPL28-207ENST00000558815 K7EMT4 169 aa11.46□□□□□ -0.57
RPL28-207ENST00000558815 RBMY1DP0C7P1 496 aaKnown RBP11.46□□□□□ -0.57
RPL28-207ENST00000558815 FCGR2BP31994 310 aaPredicted RBP11.46□□□□□ -0.57
RPL28-207ENST00000558815 INPP1P49441 399 aa11.46□□□□□ -0.57
RPL28-207ENST00000558815 SUPT4H1P63272 117 aaKnown RBP11.46□□□□□ -0.57
RPL28-207ENST00000558815 MLANAQ16655 118 aa11.46□□□□□ -0.57
RPL28-207ENST00000558815 LYZL2Q7Z4W2 148 aa11.46□□□□□ -0.57
RPL28-207ENST00000558815 IL22RA2Q969J5 263 aa11.46□□□□□ -0.57
RPL28-207ENST00000558815 ZNF414Q96IQ9 312 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms