RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 FAM90A26D6RGX4 464 aa13.47□□□□□ -0.25
TPM1-214ENST00000558544 MYCNOSP40205 109 aa13.47□□□□□ -0.25
TPM1-214ENST00000558544 ZNF343Q6P1L6 599 aa13.47□□□□□ -0.25
TPM1-214ENST00000558544 ZBTB8BQ8NAP8 495 aaPredicted RBP13.47□□□□□ -0.25
TPM1-214ENST00000558544 OR4D5Q8NGN0 318 aa13.47□□□□□ -0.25
TPM1-214ENST00000558544 MISP3Q96FF7 219 aa13.47□□□□□ -0.25
TPM1-214ENST00000558544 MAGT1Q9H0U3 335 aa13.47□□□□□ -0.25
TPM1-214ENST00000558544 HIPK2Q9H2X6 1198 aa13.47□□□□□ -0.25
TPM1-214ENST00000558544 C5orf51A6NDU8 294 aa13.46□□□□□ -0.25
TPM1-214ENST00000558544 SCGB1D2O95969 90 aa13.46□□□□□ -0.25
TPM1-214ENST00000558544 TRBV12-3P01733 135 aa13.46□□□□□ -0.25
TPM1-214ENST00000558544 IAPPP10997 89 aa13.46□□□□□ -0.25
TPM1-214ENST00000558544 ZNF616Q08AN1 781 aa13.46□□□□□ -0.25
TPM1-214ENST00000558544 FCN2Q15485 313 aa13.46□□□□□ -0.25
TPM1-214ENST00000558544 BSXQ3C1V8 233 aa13.46□□□□□ -0.25
TPM1-214ENST00000558544 AKAP14Q86UN6 197 aa13.46□□□□□ -0.25
TPM1-214ENST00000558544 SLC24A4Q8NFF2 622 aa13.46□□□□□ -0.25
TPM1-214ENST00000558544 OR1N2Q8NGR9 330 aa13.46□□□□□ -0.25
TPM1-214ENST00000558544 DPF1Q92782 380 aa13.46□□□□□ -0.25
TPM1-214ENST00000558544 EEF1AKMT3Q96AZ1 226 aa13.46□□□□□ -0.25
TPM1-214ENST00000558544 GSKIPQ9P0R6 139 aa13.46□□□□□ -0.25
TPM1-214ENST00000558544 LINC01619G3V211 115 aa13.45□□□□□ -0.26
TPM1-214ENST00000558544 MED6O75586 246 aa13.45□□□□□ -0.26
TPM1-214ENST00000558544 HTR2BP41595 481 aa13.45□□□□□ -0.26
TPM1-214ENST00000558544 NKX2-1P43699 371 aaPredicted RBP13.45□□□□□ -0.26
TPM1-214ENST00000558544 SUB1P53999 127 aaKnown RBP eCLIP13.45□□□□□ -0.26
TPM1-214ENST00000558544 FHL3Q13643 280 aa13.45□□□□□ -0.26
TPM1-214ENST00000558544 TREML4Q6UXN2 200 aa13.45□□□□□ -0.26
TPM1-214ENST00000558544 PINX1Q96BK5 328 aaKnown RBP13.45□□□□□ -0.26
TPM1-214ENST00000558544 CXorf58Q96LI9 332 aa13.45□□□□□ -0.26
TPM1-214ENST00000558544 CCDC140Q96MF4 163 aa13.45□□□□□ -0.26
TPM1-214ENST00000558544 MED28Q9H204 178 aa13.45□□□□□ -0.26
TPM1-214ENST00000558544 PEF1Q9UBV8 284 aaKnown RBP13.45□□□□□ -0.26
TPM1-214ENST00000558544 K7EIM0 57 aa13.45□□□□□ -0.26
TPM1-214ENST00000558544 GOSR2O14653 212 aa13.45□□□□□ -0.26
TPM1-214ENST00000558544 SYNGR2O43760 224 aa13.45□□□□□ -0.26
TPM1-214ENST00000558544 SSNA1O43805 119 aa13.45□□□□□ -0.26
TPM1-214ENST00000558544 HSPB1P04792 205 aaKnown RBP13.45□□□□□ -0.26
TPM1-214ENST00000558544 ID3Q02535 119 aa13.45□□□□□ -0.26
TPM1-214ENST00000558544 GSG1LQ6UXU4 331 aa13.45□□□□□ -0.26
TPM1-214ENST00000558544 LINC00482Q8N8I6 264 aa13.45□□□□□ -0.26
TPM1-214ENST00000558544 OR11H7Q8NGC8 314 aa13.45□□□□□ -0.26
TPM1-214ENST00000558544 ST6GAL2Q96JF0 529 aa13.45□□□□□ -0.26
TPM1-214ENST00000558544 RANGRFQ9HD47 186 aaPredicted RBP13.45□□□□□ -0.26
TPM1-214ENST00000558544 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.44□□□□□ -0.26
TPM1-214ENST00000558544 PPP5D1E7EU14 171 aa13.44□□□□□ -0.26
TPM1-214ENST00000558544 WRBO00258 174 aa13.44□□□□□ -0.26
TPM1-214ENST00000558544 MT-CO2P00403 227 aa13.44□□□□□ -0.26
TPM1-214ENST00000558544 IFNA10P01566 189 aa13.44□□□□□ -0.26
TPM1-214ENST00000558544 OR8U8P0C7N1 319 aa13.44□□□□□ -0.26
TPM1-214ENST00000558544 NPY1RP25929 384 aa13.44□□□□□ -0.26
TPM1-214ENST00000558544 SLURP1P55000 103 aa13.44□□□□□ -0.26
TPM1-214ENST00000558544 POLR2GP62487 172 aaKnown RBP eCLIP13.44□□□□□ -0.26
TPM1-214ENST00000558544 C2orf83Q53S99 150 aa13.44□□□□□ -0.26
TPM1-214ENST00000558544 CLEC19AQ6UXS0 136 aa13.44□□□□□ -0.26
TPM1-214ENST00000558544 ZNF502Q8TBZ5 544 aa13.44□□□□□ -0.26
TPM1-214ENST00000558544 VN1R17PQ8TDU5 208 aa13.44□□□□□ -0.26
TPM1-214ENST00000558544 SCARB1Q8WTV0 552 aa13.44□□□□□ -0.26
TPM1-214ENST00000558544 TMEM170AQ8WVE7 144 aa13.44□□□□□ -0.26
TPM1-214ENST00000558544 TRBV7-1A0A0A6YYK4 115 aa13.43□□□□□ -0.26
TPM1-214ENST00000558544 BOLA2-SMG1P6H3BVE0 249 aa13.43□□□□□ -0.26
TPM1-214ENST00000558544 I3L2K1 104 aa13.43□□□□□ -0.26
TPM1-214ENST00000558544 SSSCA1O60232 199 aa13.43□□□□□ -0.26
TPM1-214ENST00000558544 CCNKO75909 580 aa13.43□□□□□ -0.26
TPM1-214ENST00000558544 SIX6O95475 246 aa13.43□□□□□ -0.26
TPM1-214ENST00000558544 IGHV3-48P01763 117 aa13.43□□□□□ -0.26
TPM1-214ENST00000558544 CXCL3P19876 107 aa13.43□□□□□ -0.26
TPM1-214ENST00000558544 PVRIGQ6DKI7 326 aa13.43□□□□□ -0.26
TPM1-214ENST00000558544 C2orf50Q96LR7 162 aa13.43□□□□□ -0.26
TPM1-214ENST00000558544 C21orf62Q9NYP8 219 aa13.43□□□□□ -0.26
TPM1-214ENST00000558544 U3KQ87 197 aa13.43□□□□□ -0.26
TPM1-214ENST00000558544 CORTO00230 105 aa13.42□□□□□ -0.26
TPM1-214ENST00000558544 BMPR1BO00238 502 aa13.42□□□□□ -0.26
TPM1-214ENST00000558544 MBPP02686 304 aaPredicted RBP13.42□□□□□ -0.26
TPM1-214ENST00000558544 CD33P20138 364 aa13.42□□□□□ -0.26
TPM1-214ENST00000558544 HOXD3P31249 432 aaPredicted RBP13.42□□□□□ -0.26
TPM1-214ENST00000558544 GPR183P32249 361 aa13.42□□□□□ -0.26
TPM1-214ENST00000558544 UBAC2Q8NBM4 344 aa13.42□□□□□ -0.26
TPM1-214ENST00000558544 PPP1R14BQ96C90 147 aa13.42□□□□□ -0.26
TPM1-214ENST00000558544 CIB3Q96Q77 187 aaPredicted RBP13.42□□□□□ -0.26
TPM1-214ENST00000558544 ZC4H2Q9NQZ6 224 aa13.42□□□□□ -0.26
TPM1-214ENST00000558544 RCL1Q9Y2P8 373 aaKnown RBP13.42□□□□□ -0.26
TPM1-214ENST00000558544 H3BP45 60 aa13.41□□□□□ -0.26
TPM1-214ENST00000558544 ARL3P36405 182 aa13.41□□□□□ -0.26
TPM1-214ENST00000558544 OPRK1P41145 380 aa13.41□□□□□ -0.26
TPM1-214ENST00000558544 FAM209BQ5JX69 171 aa13.41□□□□□ -0.26
TPM1-214ENST00000558544 MGAT4CQ9UBM8 478 aa13.41□□□□□ -0.26
TPM1-214ENST00000558544 LSM5Q9Y4Y9 91 aaKnown RBP13.41□□□□□ -0.26
TPM1-214ENST00000558544 OR2T8A6NH00 312 aa13.4□□□□□ -0.26
TPM1-214ENST00000558544 C15orf62A8K5M9 175 aa13.4□□□□□ -0.26
TPM1-214ENST00000558544 F8W735 103 aaPredicted RBP13.4□□□□□ -0.26
TPM1-214ENST00000558544 CLEC3BP05452 202 aa13.4□□□□□ -0.26
TPM1-214ENST00000558544 ZP3P21754 424 aa13.4□□□□□ -0.26
TPM1-214ENST00000558544 RPEL1Q2QD12 228 aa13.4□□□□□ -0.26
TPM1-214ENST00000558544 Q56UQ5 140 aa13.4□□□□□ -0.26
TPM1-214ENST00000558544 NOXA1Q86UR1 476 aa13.4□□□□□ -0.26
TPM1-214ENST00000558544 DCUN1D4Q92564 292 aa13.4□□□□□ -0.26
TPM1-214ENST00000558544 DLX4Q92988 240 aaPredicted RBP13.4□□□□□ -0.26
TPM1-214ENST00000558544 OR4C12Q96R67 309 aa13.4□□□□□ -0.26
TPM1-214ENST00000558544 FNDC4Q9H6D8 234 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms