RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 H1FXQ92522 213 aaKnown RBP5.92□□□□□ -1.46
VPS13C-206ENST00000558338 TNFRSF14Q92956 283 aa5.92□□□□□ -1.46
VPS13C-206ENST00000558338 RNASE6Q93091 150 aaKnown RBP5.92□□□□□ -1.46
VPS13C-206ENST00000558338 SFRP2Q96HF1 295 aa5.92□□□□□ -1.46
VPS13C-206ENST00000558338 PFDN5Q99471 154 aa5.92□□□□□ -1.46
VPS13C-206ENST00000558338 VKORC1Q9BQB6 163 aa5.92□□□□□ -1.46
VPS13C-206ENST00000558338 GSN-AS1Q9NRJ2 163 aa5.92□□□□□ -1.46
VPS13C-206ENST00000558338 NDUFA4L2Q9NRX3 87 aa5.92□□□□□ -1.46
VPS13C-206ENST00000558338 WASHC3Q9Y3C0 194 aa5.92□□□□□ -1.46
VPS13C-206ENST00000558338 DMRT1Q9Y5R6 373 aa5.92□□□□□ -1.46
VPS13C-206ENST00000558338 PRR14LQ5THK1 2151 aa5.92□□□□□ -1.46
VPS13C-206ENST00000558338 URB1O60287 2271 aaKnown RBP5.91□□□□□ -1.46
VPS13C-206ENST00000558338 TNFRSF13BO14836 293 aaPredicted RBP5.91□□□□□ -1.46
VPS13C-206ENST00000558338 FSTL3O95633 263 aa5.91□□□□□ -1.46
VPS13C-206ENST00000558338 OR5G3P0C626 314 aa5.91□□□□□ -1.46
VPS13C-206ENST00000558338 DEFA4P12838 97 aa5.91□□□□□ -1.46
VPS13C-206ENST00000558338 CCL3L1P16619 93 aa5.91□□□□□ -1.46
VPS13C-206ENST00000558338 NPPCP23582 126 aa5.91□□□□□ -1.46
VPS13C-206ENST00000558338 APOBEC3AP31941 199 aaPredicted RBP5.91□□□□□ -1.46
VPS13C-206ENST00000558338 CD69Q07108 199 aa5.91□□□□□ -1.46
VPS13C-206ENST00000558338 KHDC1LQ5JSQ8 128 aa5.91□□□□□ -1.46
VPS13C-206ENST00000558338 COA6Q5JTJ3 125 aaKnown RBP5.91□□□□□ -1.46
VPS13C-206ENST00000558338 OR4P4Q8NGL7 312 aa5.91□□□□□ -1.46
VPS13C-206ENST00000558338 CCL17Q92583 94 aa5.91□□□□□ -1.46
VPS13C-206ENST00000558338 NABP2Q9BQ15 211 aa5.91□□□□□ -1.46
VPS13C-206ENST00000558338 MIOXQ9UGB7 285 aa5.91□□□□□ -1.46
VPS13C-206ENST00000558338 IGHV1-69-2A0A0G2JMI3 117 aa5.9□□□□□ -1.46
VPS13C-206ENST00000558338 SCO2A0A1W2PP80 73 aa5.9□□□□□ -1.46
VPS13C-206ENST00000558338 IFITM10A6NMD0 228 aa5.9□□□□□ -1.46
VPS13C-206ENST00000558338 SRRM4A7MD48 611 aaKnown RBP5.9□□□□□ -1.46
VPS13C-206ENST00000558338 SHISA9B4DS77 424 aa5.9□□□□□ -1.46
VPS13C-206ENST00000558338 SOD3P08294 240 aa5.9□□□□□ -1.46
VPS13C-206ENST00000558338 LINC00869P0C866 280 aa5.9□□□□□ -1.46
VPS13C-206ENST00000558338 TMEM155Q4W5P6 130 aa5.9□□□□□ -1.46
VPS13C-206ENST00000558338 FAM78BQ5VT40 261 aa5.9□□□□□ -1.46
VPS13C-206ENST00000558338 TGIF2LXQ8IUE1 241 aa5.9□□□□□ -1.46
VPS13C-206ENST00000558338 LINC00528Q8N1L1 170 aa5.9□□□□□ -1.46
VPS13C-206ENST00000558338 OR10G8Q8NGN5 311 aa5.9□□□□□ -1.46
VPS13C-206ENST00000558338 OR10D4PQ8NGN7 298 aa5.9□□□□□ -1.46
VPS13C-206ENST00000558338 OR1L4Q8NGR5 311 aa5.9□□□□□ -1.46
VPS13C-206ENST00000558338 OR1P1Q8NH06 330 aa5.9□□□□□ -1.46
VPS13C-206ENST00000558338 SNRNP40Q96DI7 357 aaKnown RBP5.9□□□□□ -1.46
VPS13C-206ENST00000558338 C1orf43Q9BWL3 253 aa5.9□□□□□ -1.46
VPS13C-206ENST00000558338 YTHDF2Q9Y5A9 579 aaKnown RBP5.9□□□□□ -1.46
VPS13C-206ENST00000558338 CUL9Q8IWT3 2517 aa5.9□□□□□ -1.47
VPS13C-206ENST00000558338 XKRY2A2RUG3 117 aa5.9□□□□□ -1.47
VPS13C-206ENST00000558338 E7EQL1 145 aa5.9□□□□□ -1.47
VPS13C-206ENST00000558338 DVL1O14640 695 aa5.9□□□□□ -1.47
VPS13C-206ENST00000558338 SVILO95425 2214 aa5.9□□□□□ -1.47
VPS13C-206ENST00000558338 RBP4P02753 201 aa5.9□□□□□ -1.47
VPS13C-206ENST00000558338 LOXP28300 417 aaPredicted RBP5.9□□□□□ -1.47
VPS13C-206ENST00000558338 CHRNB4P30926 498 aa5.9□□□□□ -1.47
VPS13C-206ENST00000558338 OR10J1P30954 320 aa5.9□□□□□ -1.47
VPS13C-206ENST00000558338 LGALS7P47929 136 aa5.9□□□□□ -1.47
VPS13C-206ENST00000558338 PDLIM4P50479 330 aa5.9□□□□□ -1.47
VPS13C-206ENST00000558338 UCNP55089 124 aa5.9□□□□□ -1.47
VPS13C-206ENST00000558338 DLX6P56179 175 aa5.9□□□□□ -1.47
VPS13C-206ENST00000558338 SELENOTP62341 195 aa5.9□□□□□ -1.47
VPS13C-206ENST00000558338 RELQ04864 619 aaPredicted RBP5.9□□□□□ -1.47
VPS13C-206ENST00000558338 GAMTQ14353 236 aa5.9□□□□□ -1.47
VPS13C-206ENST00000558338 ETFRF1Q6IPR1 90 aa5.9□□□□□ -1.47
VPS13C-206ENST00000558338 UNQ6494/PRO21346Q6UXR6 183 aa5.9□□□□□ -1.47
VPS13C-206ENST00000558338 OR5T1Q8NG75 326 aa5.9□□□□□ -1.47
VPS13C-206ENST00000558338 PACRGQ96M98 296 aaPredicted RBP5.9□□□□□ -1.47
VPS13C-206ENST00000558338 WFIKKN1Q96NZ8 548 aa5.9□□□□□ -1.47
VPS13C-206ENST00000558338 ELOVL1Q9BW60 279 aa5.9□□□□□ -1.47
VPS13C-206ENST00000558338 GPR61Q9BZJ8 451 aa5.9□□□□□ -1.47
VPS13C-206ENST00000558338 ZNF430Q9H8G1 570 aaPredicted RBP5.9□□□□□ -1.47
VPS13C-206ENST00000558338 CHTOPQ9Y3Y2 248 aaKnown RBP5.9□□□□□ -1.47
VPS13C-206ENST00000558338 A0A1W2PRE2 83 aa5.89□□□□□ -1.47
VPS13C-206ENST00000558338 OR7C2O60412 319 aa5.89□□□□□ -1.47
VPS13C-206ENST00000558338 IGHV2-70P01814 119 aa5.89□□□□□ -1.47
VPS13C-206ENST00000558338 C1QTNF9P0C862 333 aa5.89□□□□□ -1.47
VPS13C-206ENST00000558338 C8orf88P0DMB2 117 aa5.89□□□□□ -1.47
VPS13C-206ENST00000558338 IGHV1-8P0DP01 117 aa5.89□□□□□ -1.47
VPS13C-206ENST00000558338 FABP4P15090 132 aa5.89□□□□□ -1.47
VPS13C-206ENST00000558338 MYOD1P15172 320 aa5.89□□□□□ -1.47
VPS13C-206ENST00000558338 PRRX1P54821 245 aa5.89□□□□□ -1.47
VPS13C-206ENST00000558338 PSG5Q15238 335 aa5.89□□□□□ -1.47
VPS13C-206ENST00000558338 FBXL19-AS1Q494R0 122 aa5.89□□□□□ -1.47
VPS13C-206ENST00000558338 PYY3Q5JQD4 70 aa5.89□□□□□ -1.47
VPS13C-206ENST00000558338 C9orf152Q5JTZ5 239 aa5.89□□□□□ -1.47
VPS13C-206ENST00000558338 SPATA31B1PQ5VZV4 182 aa5.89□□□□□ -1.47
VPS13C-206ENST00000558338 TEX38Q6PEX7 206 aa5.89□□□□□ -1.47
VPS13C-206ENST00000558338 MIR17HGQ75NE6 70 aa5.89□□□□□ -1.47
VPS13C-206ENST00000558338 DMRTC2Q8IXT2 367 aaPredicted RBP5.89□□□□□ -1.47
VPS13C-206ENST00000558338 OR5R1Q8NH85 324 aa5.89□□□□□ -1.47
VPS13C-206ENST00000558338 C22orf15Q8WYQ4 148 aa5.89□□□□□ -1.47
VPS13C-206ENST00000558338 ST6GALNAC6Q969X2 333 aa5.89□□□□□ -1.47
VPS13C-206ENST00000558338 DERL1Q9BUN8 251 aa5.89□□□□□ -1.47
VPS13C-206ENST00000558338 TMEM133Q9H2Q1 129 aa5.89□□□□□ -1.47
VPS13C-206ENST00000558338 CTSZQ9UBR2 303 aa5.89□□□□□ -1.47
VPS13C-206ENST00000558338 AMMECR1Q9Y4X0 333 aaPredicted RBP5.89□□□□□ -1.47
VPS13C-206ENST00000558338 CORTO00230 105 aa5.88□□□□□ -1.47
VPS13C-206ENST00000558338 GNG4P50150 75 aa5.88□□□□□ -1.47
VPS13C-206ENST00000558338 CNN1P51911 297 aaKnown RBP5.88□□□□□ -1.47
VPS13C-206ENST00000558338 COX19Q49B96 90 aa5.88□□□□□ -1.47
VPS13C-206ENST00000558338 LYPD2Q6UXB3 125 aa5.88□□□□□ -1.47
VPS13C-206ENST00000558338 MMD2Q8IY49 270 aa5.88□□□□□ -1.47
VPS13C-206ENST00000558338 TEX45Q8NA69 505 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms