RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 LINC00322Q6ZN03 302 aaPredicted RBP9.28□□□□□ -0.92
CDC42BPB-202ENST00000558321 DYNC2LI1Q8TCX1 351 aa9.28□□□□□ -0.92
CDC42BPB-202ENST00000558321 TXN2Q99757 166 aa9.28□□□□□ -0.92
CDC42BPB-202ENST00000558321 C6orf62Q9GZU0 229 aaPredicted RBP9.28□□□□□ -0.92
CDC42BPB-202ENST00000558321 HIPK2Q9H2X6 1198 aa9.28□□□□□ -0.92
CDC42BPB-202ENST00000558321 C5orf66Q9H5L9 145 aa9.28□□□□□ -0.92
CDC42BPB-202ENST00000558321 RETNQ9HD89 108 aa9.28□□□□□ -0.92
CDC42BPB-202ENST00000558321 ENY2Q9NPA8 101 aa9.28□□□□□ -0.92
CDC42BPB-202ENST00000558321 CCDC59Q9P031 241 aaKnown RBP9.28□□□□□ -0.92
CDC42BPB-202ENST00000558321 A0A0B4J293 547 aa9.27□□□□□ -0.93
CDC42BPB-202ENST00000558321 F8W735 103 aaPredicted RBP9.27□□□□□ -0.93
CDC42BPB-202ENST00000558321 I3L2K1 104 aa9.27□□□□□ -0.93
CDC42BPB-202ENST00000558321 K7EMT4 169 aa9.27□□□□□ -0.93
CDC42BPB-202ENST00000558321 ST8SIA3O43173 380 aa9.27□□□□□ -0.93
CDC42BPB-202ENST00000558321 GNG7O60262 68 aa9.27□□□□□ -0.93
CDC42BPB-202ENST00000558321 B3GALNT1O75752 331 aa9.27□□□□□ -0.93
CDC42BPB-202ENST00000558321 CTSGP08311 255 aa9.27□□□□□ -0.93
CDC42BPB-202ENST00000558321 AKAIN1P0CW23 69 aa9.27□□□□□ -0.93
CDC42BPB-202ENST00000558321 ADMP35318 185 aa9.27□□□□□ -0.93
CDC42BPB-202ENST00000558321 RPL5P46777 297 aaKnown RBP9.27□□□□□ -0.93
CDC42BPB-202ENST00000558321 SUB1P53999 127 aaKnown RBP eCLIP9.27□□□□□ -0.93
CDC42BPB-202ENST00000558321 SMIM4Q8WVI0 70 aa9.27□□□□□ -0.93
CDC42BPB-202ENST00000558321 FAM110AQ9BQ89 295 aa9.27□□□□□ -0.93
CDC42BPB-202ENST00000558321 BCL7BQ9BQE9 202 aa9.27□□□□□ -0.93
CDC42BPB-202ENST00000558321 RABL2AQ9UBK7 228 aaPredicted RBP9.27□□□□□ -0.93
CDC42BPB-202ENST00000558321 RABL2BQ9UNT1 228 aa9.27□□□□□ -0.93
CDC42BPB-202ENST00000558321 C15orf62A8K5M9 175 aa9.26□□□□□ -0.93
CDC42BPB-202ENST00000558321 CTDSPLO15194 276 aa9.26□□□□□ -0.93
CDC42BPB-202ENST00000558321 UCP1P25874 307 aa9.26□□□□□ -0.93
CDC42BPB-202ENST00000558321 ETV6P41212 452 aa9.26□□□□□ -0.93
CDC42BPB-202ENST00000558321 HOXA1P49639 335 aaPredicted RBP9.26□□□□□ -0.93
CDC42BPB-202ENST00000558321 ZNF114Q8NC26 417 aa9.26□□□□□ -0.93
CDC42BPB-202ENST00000558321 DUSP18Q8NEJ0 188 aa9.26□□□□□ -0.93
CDC42BPB-202ENST00000558321 SPAG8Q99932 426 aaPredicted RBP9.26□□□□□ -0.93
CDC42BPB-202ENST00000558321 RTBDNQ9BSG5 229 aaPredicted RBP9.26□□□□□ -0.93
CDC42BPB-202ENST00000558321 EDA2RQ9HAV5 297 aa9.26□□□□□ -0.93
CDC42BPB-202ENST00000558321 RSL24D1Q9UHA3 163 aaKnown RBP9.26□□□□□ -0.93
CDC42BPB-202ENST00000558321 LOC102724200A0A096LPH7 203 aaPredicted RBP9.25□□□□□ -0.93
CDC42BPB-202ENST00000558321 TSPAN4O14817 238 aa9.25□□□□□ -0.93
CDC42BPB-202ENST00000558321 OR5AC1P0C628 307 aa9.25□□□□□ -0.93
CDC42BPB-202ENST00000558321 P0C879 139 aa9.25□□□□□ -0.93
CDC42BPB-202ENST00000558321 NPBWR1P48145 328 aa9.25□□□□□ -0.93
CDC42BPB-202ENST00000558321 DHODHQ02127 395 aa9.25□□□□□ -0.93
CDC42BPB-202ENST00000558321 OR4C16Q8NGL9 310 aa9.25□□□□□ -0.93
CDC42BPB-202ENST00000558321 GGTLC1Q9BX51 225 aa9.25□□□□□ -0.93
CDC42BPB-202ENST00000558321 NXF2Q9GZY0 626 aaKnown RBP9.25□□□□□ -0.93
CDC42BPB-202ENST00000558321 TMEM222Q9H0R3 208 aa9.25□□□□□ -0.93
CDC42BPB-202ENST00000558321 NAA60Q9H7X0 242 aa9.25□□□□□ -0.93
CDC42BPB-202ENST00000558321 UBQLN2Q9UHD9 624 aa9.25□□□□□ -0.93
CDC42BPB-202ENST00000558321 SMPXQ9UHP9 88 aa9.25□□□□□ -0.93
CDC42BPB-202ENST00000558321 IGHV3-49A0A0A0MS15 119 aa9.24□□□□□ -0.93
CDC42BPB-202ENST00000558321 FABP12A6NFH5 140 aa9.24□□□□□ -0.93
CDC42BPB-202ENST00000558321 OR4C46A6NHA9 309 aa9.24□□□□□ -0.93
CDC42BPB-202ENST00000558321 H3BMQ9 156 aa9.24□□□□□ -0.93
CDC42BPB-202ENST00000558321 CORTO00230 105 aa9.24□□□□□ -0.93
CDC42BPB-202ENST00000558321 CDS2O95674 445 aa9.24□□□□□ -0.93
CDC42BPB-202ENST00000558321 FCGR2BP31994 310 aaPredicted RBP9.24□□□□□ -0.93
CDC42BPB-202ENST00000558321 SURF2Q15527 256 aaPredicted RBP9.24□□□□□ -0.93
CDC42BPB-202ENST00000558321 FAM219AQ8IW50 185 aa9.24□□□□□ -0.93
CDC42BPB-202ENST00000558321 TMEM116Q8NCL8 245 aa9.24□□□□□ -0.93
CDC42BPB-202ENST00000558321 OR51S1Q8NGJ8 323 aa9.24□□□□□ -0.93
CDC42BPB-202ENST00000558321 MCFD2Q8NI22 146 aa9.24□□□□□ -0.93
CDC42BPB-202ENST00000558321 GLYATL2Q8WU03 294 aa9.24□□□□□ -0.93
CDC42BPB-202ENST00000558321 RBPMSQ93062 196 aaKnown RBP9.24□□□□□ -0.93
CDC42BPB-202ENST00000558321 SCGB3A2Q96PL1 93 aa9.24□□□□□ -0.93
CDC42BPB-202ENST00000558321 PRRT1Q99946 306 aa9.24□□□□□ -0.93
CDC42BPB-202ENST00000558321 RHPN1-AS1Q9BWJ2 59 aa9.24□□□□□ -0.93
CDC42BPB-202ENST00000558321 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.24□□□□□ -0.93
CDC42BPB-202ENST00000558321 MCUBQ9NWR8 336 aa9.24□□□□□ -0.93
CDC42BPB-202ENST00000558321 SCP2D1Q9UJQ7 156 aa9.24□□□□□ -0.93
CDC42BPB-202ENST00000558321 GPR132Q9UNW8 380 aa9.24□□□□□ -0.93
CDC42BPB-202ENST00000558321 KCNIP3Q9Y2W7 256 aa9.24□□□□□ -0.93
CDC42BPB-202ENST00000558321 IGKV3-7A0A075B6H7 116 aa9.23□□□□□ -0.93
CDC42BPB-202ENST00000558321 TRAV14DV4A0A0A6YYC5 116 aa9.23□□□□□ -0.93
CDC42BPB-202ENST00000558321 A0A0G2JRQ6 117 aa9.23□□□□□ -0.93
CDC42BPB-202ENST00000558321 IGHV7-4-1A0A0J9YVY3 117 aa9.23□□□□□ -0.93
CDC42BPB-202ENST00000558321 ANKRD20A5PA0PJZ0 165 aa9.23□□□□□ -0.93
CDC42BPB-202ENST00000558321 CCDC160A6NGH7 325 aa9.23□□□□□ -0.93
CDC42BPB-202ENST00000558321 INS-IGF2F8WCM5 200 aa9.23□□□□□ -0.93
CDC42BPB-202ENST00000558321 GSTZ1O43708 216 aaPredicted RBP9.23□□□□□ -0.93
CDC42BPB-202ENST00000558321 TNFSF8P32971 234 aa9.23□□□□□ -0.93
CDC42BPB-202ENST00000558321 TFPI2P48307 235 aa9.23□□□□□ -0.93
CDC42BPB-202ENST00000558321 SPCS3P61009 180 aa9.23□□□□□ -0.93
CDC42BPB-202ENST00000558321 TMEM268Q5VZI3 342 aa9.23□□□□□ -0.93
CDC42BPB-202ENST00000558321 SELENOHQ8IZQ5 122 aaKnown RBP9.23□□□□□ -0.93
CDC42BPB-202ENST00000558321 IL17DQ8TAD2 202 aa9.23□□□□□ -0.93
CDC42BPB-202ENST00000558321 RNF2Q99496 336 aa9.23□□□□□ -0.93
CDC42BPB-202ENST00000558321 GINS3Q9BRX5 216 aa9.23□□□□□ -0.93
CDC42BPB-202ENST00000558321 SLIRPQ9GZT3 109 aaKnown RBP9.23□□□□□ -0.93
CDC42BPB-202ENST00000558321 CRYM-AS1A6NIL9 109 aa9.22□□□□□ -0.93
CDC42BPB-202ENST00000558321 CHEK1O14757 476 aa9.22□□□□□ -0.93
CDC42BPB-202ENST00000558321 TMEM50AO95807 157 aa9.22□□□□□ -0.93
CDC42BPB-202ENST00000558321 RNASE2P10153 161 aaKnown RBP9.22□□□□□ -0.93
CDC42BPB-202ENST00000558321 BMI1P35226 326 aa9.22□□□□□ -0.93
CDC42BPB-202ENST00000558321 OPRK1P41145 380 aa9.22□□□□□ -0.93
CDC42BPB-202ENST00000558321 APOC4P55056 127 aa9.22□□□□□ -0.93
CDC42BPB-202ENST00000558321 TOMM20LQ6UXN7 152 aa9.22□□□□□ -0.93
CDC42BPB-202ENST00000558321 Q6ZRM9 215 aa9.22□□□□□ -0.93
CDC42BPB-202ENST00000558321 OR10C1Q96KK4 312 aa9.22□□□□□ -0.93
CDC42BPB-202ENST00000558321 HEYLQ9NQ87 328 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms