RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 PPP5CP53041 499 aa11.5□□□□□ -0.57
TPM1-211ENST00000558314 HSPE1P61604 102 aaKnown RBP11.5□□□□□ -0.57
TPM1-211ENST00000558314 RPL11P62913 178 aaKnown RBP11.5□□□□□ -0.57
TPM1-211ENST00000558314 RNASE10Q5GAN6 216 aaKnown RBP11.5□□□□□ -0.57
TPM1-211ENST00000558314 RNASE11Q8TAA1 199 aaKnown RBP11.5□□□□□ -0.57
TPM1-211ENST00000558314 ATP6V0BQ99437 205 aa11.5□□□□□ -0.57
TPM1-211ENST00000558314 PIGPP57054 158 aa11.49□□□□□ -0.57
TPM1-211ENST00000558314 TRIM16LQ309B1 348 aa11.49□□□□□ -0.57
TPM1-211ENST00000558314 SCGB2B2Q4G0G5 96 aa11.49□□□□□ -0.57
TPM1-211ENST00000558314 MZT2AQ6P582 158 aa11.49□□□□□ -0.57
TPM1-211ENST00000558314 TCF24Q7RTU0 167 aa11.49□□□□□ -0.57
TPM1-211ENST00000558314 LINC00476Q8WZB0 136 aa11.49□□□□□ -0.57
TPM1-211ENST00000558314 RNF183Q96D59 192 aa11.49□□□□□ -0.57
TPM1-211ENST00000558314 PDCD10Q9BUL8 212 aa11.49□□□□□ -0.57
TPM1-211ENST00000558314 NXF2Q9GZY0 626 aaKnown RBP11.49□□□□□ -0.57
TPM1-211ENST00000558314 MAP6D1Q9H9H5 199 aa11.49□□□□□ -0.57
TPM1-211ENST00000558314 EXTL2Q9UBQ6 330 aa11.49□□□□□ -0.57
TPM1-211ENST00000558314 KLK11Q9UBX7 282 aa11.49□□□□□ -0.57
TPM1-211ENST00000558314 TP53TG1Q9Y2A0 90 aa11.49□□□□□ -0.57
TPM1-211ENST00000558314 KIR2DL5BA0A0G2JN68 375 aa11.48□□□□□ -0.57
TPM1-211ENST00000558314 KIR2DL5BA0A0G2JPC4 375 aa11.48□□□□□ -0.57
TPM1-211ENST00000558314 NUPR2A6NF83 97 aa11.48□□□□□ -0.57
TPM1-211ENST00000558314 DNASE2O00115 360 aaPredicted RBP11.48□□□□□ -0.57
TPM1-211ENST00000558314 ST8SIA3O43173 380 aa11.48□□□□□ -0.57
TPM1-211ENST00000558314 CD3DP04234 171 aa11.48□□□□□ -0.57
TPM1-211ENST00000558314 HOXA1P49639 335 aaPredicted RBP11.48□□□□□ -0.57
TPM1-211ENST00000558314 UCP3P55916 312 aa11.48□□□□□ -0.57
TPM1-211ENST00000558314 PAFAH1B2P68402 229 aa11.48□□□□□ -0.57
TPM1-211ENST00000558314 TNFRSF9Q07011 255 aa11.48□□□□□ -0.57
TPM1-211ENST00000558314 SP6Q3SY56 376 aa11.48□□□□□ -0.57
TPM1-211ENST00000558314 KIR2DL5AQ8N109 375 aa11.48□□□□□ -0.57
TPM1-211ENST00000558314 CADM3Q8N126 398 aa11.48□□□□□ -0.57
TPM1-211ENST00000558314 DUSP18Q8NEJ0 188 aa11.48□□□□□ -0.57
TPM1-211ENST00000558314 OR52I2Q8NH67 350 aa11.48□□□□□ -0.57
TPM1-211ENST00000558314 KIR2DL5BQ8NHK3 375 aa11.48□□□□□ -0.57
TPM1-211ENST00000558314 TP53RKQ96S44 253 aa11.48□□□□□ -0.57
TPM1-211ENST00000558314 TXN2Q99757 166 aa11.48□□□□□ -0.57
TPM1-211ENST00000558314 GINS3Q9BRX5 216 aa11.48□□□□□ -0.57
TPM1-211ENST00000558314 NAA50Q9GZZ1 169 aaKnown RBP11.48□□□□□ -0.57
TPM1-211ENST00000558314 ENY2Q9NPA8 101 aa11.48□□□□□ -0.57
TPM1-211ENST00000558314 FAM212BQ9NTI7 297 aaPredicted RBP11.48□□□□□ -0.57
TPM1-211ENST00000558314 MPTX1A8MV57 137 aa11.47□□□□□ -0.57
TPM1-211ENST00000558314 IGKV1-5P01602 117 aa11.47□□□□□ -0.57
TPM1-211ENST00000558314 ETV6P41212 452 aa11.47□□□□□ -0.57
TPM1-211ENST00000558314 NPBWR1P48145 328 aa11.47□□□□□ -0.57
TPM1-211ENST00000558314 CEMP1Q6PRD7 247 aaPredicted RBP11.47□□□□□ -0.57
TPM1-211ENST00000558314 TOMM20LQ6UXN7 152 aa11.47□□□□□ -0.57
TPM1-211ENST00000558314 TMEM217Q8N7C4 229 aa11.47□□□□□ -0.57
TPM1-211ENST00000558314 ST8SIA2Q92186 375 aa11.47□□□□□ -0.57
TPM1-211ENST00000558314 CSTL1Q9H114 145 aa11.47□□□□□ -0.57
TPM1-211ENST00000558314 COPZ2Q9P299 210 aa11.47□□□□□ -0.57
TPM1-211ENST00000558314 RABAC1Q9UI14 185 aa11.47□□□□□ -0.57
TPM1-211ENST00000558314 KLK5Q9Y337 293 aaPredicted RBP11.47□□□□□ -0.57
TPM1-211ENST00000558314 PUS1Q9Y606 427 aaKnown RBP eCLIP11.47□□□□□ -0.57
TPM1-211ENST00000558314 PLECQ15149 4684 aaKnown RBP11.47□□□□□ -0.57
TPM1-211ENST00000558314 C3orf85A0A1B0GTC6 90 aa11.46□□□□□ -0.57
TPM1-211ENST00000558314 APOHP02749 345 aaPredicted RBP11.46□□□□□ -0.57
TPM1-211ENST00000558314 LEMD1Q68G75 181 aa11.46□□□□□ -0.57
TPM1-211ENST00000558314 ZNF114Q8NC26 417 aa11.46□□□□□ -0.57
TPM1-211ENST00000558314 AP3S1Q92572 193 aa11.46□□□□□ -0.57
TPM1-211ENST00000558314 ZNF414Q96IQ9 312 aa11.46□□□□□ -0.57
TPM1-211ENST00000558314 OR10C1Q96KK4 312 aa11.46□□□□□ -0.57
TPM1-211ENST00000558314 RARRES2Q99969 163 aa11.46□□□□□ -0.57
TPM1-211ENST00000558314 A0A0B4J293 547 aa11.45□□□□□ -0.58
TPM1-211ENST00000558314 DFFBO76075 338 aa11.45□□□□□ -0.58
TPM1-211ENST00000558314 ATG12O94817 140 aa11.45□□□□□ -0.58
TPM1-211ENST00000558314 SUB1P53999 127 aaKnown RBP eCLIP11.45□□□□□ -0.58
TPM1-211ENST00000558314 CMC4P56277 68 aaPredicted RBP11.45□□□□□ -0.58
TPM1-211ENST00000558314 OR4D10Q8NGI6 311 aa11.45□□□□□ -0.58
TPM1-211ENST00000558314 RRNAD1Q96FB5 475 aaKnown RBP11.45□□□□□ -0.58
TPM1-211ENST00000558314 FBXL17Q9UF56 701 aa11.45□□□□□ -0.58
TPM1-211ENST00000558314 ALMS1Q8TCU4 4167 aa11.45□□□□□ -0.58
TPM1-211ENST00000558314 DEFB4AO15263 64 aa11.44□□□□□ -0.58
TPM1-211ENST00000558314 RGS5O15539 181 aa11.44□□□□□ -0.58
TPM1-211ENST00000558314 CA1P00915 261 aaPredicted RBP11.44□□□□□ -0.58
TPM1-211ENST00000558314 OPRK1P41145 380 aa11.44□□□□□ -0.58
TPM1-211ENST00000558314 DEFB131AP59861 70 aa11.44□□□□□ -0.58
TPM1-211ENST00000558314 RND3P61587 244 aa11.44□□□□□ -0.58
TPM1-211ENST00000558314 GPR107Q5VW38 600 aa11.44□□□□□ -0.58
TPM1-211ENST00000558314 ZNF600Q6ZNG1 722 aa11.44□□□□□ -0.58
TPM1-211ENST00000558314 LILRB2Q8N423 598 aa11.44□□□□□ -0.58
TPM1-211ENST00000558314 CCDC71LQ8N9Z2 235 aa11.44□□□□□ -0.58
TPM1-211ENST00000558314 OR13C8Q8NGS7 320 aa11.44□□□□□ -0.58
TPM1-211ENST00000558314 MARCH1Q8TCQ1 289 aa11.44□□□□□ -0.58
TPM1-211ENST00000558314 PHLDA1Q8WV24 401 aaPredicted RBP11.44□□□□□ -0.58
TPM1-211ENST00000558314 TMEM230Q96A57 120 aa11.44□□□□□ -0.58
TPM1-211ENST00000558314 ZNF486Q96H40 463 aaPredicted RBP11.44□□□□□ -0.58
TPM1-211ENST00000558314 MS4A6AQ9H2W1 248 aa11.44□□□□□ -0.58
TPM1-211ENST00000558314 RAB3DO95716 219 aa11.43□□□□□ -0.58
TPM1-211ENST00000558314 TMEM50AO95807 157 aa11.43□□□□□ -0.58
TPM1-211ENST00000558314 ZNF182P17025 639 aaPredicted RBP11.43□□□□□ -0.58
TPM1-211ENST00000558314 NANOS2P60321 138 aaKnown RBP11.43□□□□□ -0.58
TPM1-211ENST00000558314 MLANAQ16655 118 aa11.43□□□□□ -0.58
TPM1-211ENST00000558314 FAAP20Q6NZ36 180 aa11.43□□□□□ -0.58
TPM1-211ENST00000558314 LHFPL1Q86WI0 220 aa11.43□□□□□ -0.58
TPM1-211ENST00000558314 ARRDC1Q8N5I2 433 aa11.43□□□□□ -0.58
TPM1-211ENST00000558314 STXBP6Q8NFX7 210 aa11.43□□□□□ -0.58
TPM1-211ENST00000558314 OR11H2Q8NH07 326 aa11.43□□□□□ -0.58
TPM1-211ENST00000558314 ZFAND1Q8TCF1 268 aa11.43□□□□□ -0.58
TPM1-211ENST00000558314 ABHD1Q96SE0 405 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms