RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 C15orf62A8K5M9 175 aa7.59□□□□□ -1.19
USP3-207ENST00000558218 K7EIM0 57 aa7.59□□□□□ -1.19
USP3-207ENST00000558218 CTDSP2O14595 271 aa7.59□□□□□ -1.19
USP3-207ENST00000558218 CTSDP07339 412 aaPredicted RBP7.59□□□□□ -1.19
USP3-207ENST00000558218 CTSGP08311 255 aa7.59□□□□□ -1.19
USP3-207ENST00000558218 CD7P09564 240 aa7.59□□□□□ -1.19
USP3-207ENST00000558218 P0C879 139 aa7.59□□□□□ -1.19
USP3-207ENST00000558218 LYL1P12980 280 aa7.59□□□□□ -1.19
USP3-207ENST00000558218 RPL5P46777 297 aaKnown RBP7.59□□□□□ -1.19
USP3-207ENST00000558218 MFAP4P55083 255 aa7.59□□□□□ -1.19
USP3-207ENST00000558218 RELQ04864 619 aaPredicted RBP7.59□□□□□ -1.19
USP3-207ENST00000558218 CASC10Q5T4H9 136 aa7.59□□□□□ -1.19
USP3-207ENST00000558218 LAMTOR1Q6IAA8 161 aa7.59□□□□□ -1.19
USP3-207ENST00000558218 UNQ9165/PRO28630Q6UXU0 137 aa7.59□□□□□ -1.19
USP3-207ENST00000558218 FAM219AQ8IW50 185 aa7.59□□□□□ -1.19
USP3-207ENST00000558218 OR52B4Q8NGK2 314 aa7.59□□□□□ -1.19
USP3-207ENST00000558218 IL17DQ8TAD2 202 aa7.59□□□□□ -1.19
USP3-207ENST00000558218 MRGPRFQ96AM1 343 aa7.59□□□□□ -1.19
USP3-207ENST00000558218 SPAG8Q99932 426 aaPredicted RBP7.59□□□□□ -1.19
USP3-207ENST00000558218 FAM110AQ9BQ89 295 aa7.59□□□□□ -1.19
USP3-207ENST00000558218 MIXL1Q9H2W2 232 aa7.59□□□□□ -1.19
USP3-207ENST00000558218 EDA2RQ9HAV5 297 aa7.59□□□□□ -1.19
USP3-207ENST00000558218 PLEKHA3Q9HB20 300 aa7.59□□□□□ -1.19
USP3-207ENST00000558218 MLXQ9UH92 298 aa7.59□□□□□ -1.19
USP3-207ENST00000558218 OR2T8A6NH00 312 aa7.58□□□□□ -1.2
USP3-207ENST00000558218 DISC1C4P0D8 188 aa7.58□□□□□ -1.2
USP3-207ENST00000558218 I3L2K1 104 aa7.58□□□□□ -1.2
USP3-207ENST00000558218 CORTO00230 105 aa7.58□□□□□ -1.2
USP3-207ENST00000558218 TSPAN4O14817 238 aa7.58□□□□□ -1.2
USP3-207ENST00000558218 NUPL2O15504 423 aaKnown RBP7.58□□□□□ -1.2
USP3-207ENST00000558218 CDS2O95674 445 aa7.58□□□□□ -1.2
USP3-207ENST00000558218 CD5P06127 495 aa7.58□□□□□ -1.2
USP3-207ENST00000558218 UCP1P25874 307 aa7.58□□□□□ -1.2
USP3-207ENST00000558218 SNCAP37840 140 aa7.58□□□□□ -1.2
USP3-207ENST00000558218 SUB1P53999 127 aaKnown RBP eCLIP7.58□□□□□ -1.2
USP3-207ENST00000558218 CMC4P56277 68 aaPredicted RBP7.58□□□□□ -1.2
USP3-207ENST00000558218 SPCS2Q15005 226 aa7.58□□□□□ -1.2
USP3-207ENST00000558218 PVRIGQ6DKI7 326 aa7.58□□□□□ -1.2
USP3-207ENST00000558218 CLVS1Q8IUQ0 354 aaPredicted RBP7.58□□□□□ -1.2
USP3-207ENST00000558218 DYNC2LI1Q8TCX1 351 aa7.58□□□□□ -1.2
USP3-207ENST00000558218 SMIM4Q8WVI0 70 aa7.58□□□□□ -1.2
USP3-207ENST00000558218 CACNG8Q8WXS5 425 aa7.58□□□□□ -1.2
USP3-207ENST00000558218 ISOC1Q96CN7 298 aa7.58□□□□□ -1.2
USP3-207ENST00000558218 RRNAD1Q96FB5 475 aaKnown RBP7.58□□□□□ -1.2
USP3-207ENST00000558218 DIRAS2Q96HU8 199 aa7.58□□□□□ -1.2
USP3-207ENST00000558218 SCGB3A2Q96PL1 93 aa7.58□□□□□ -1.2
USP3-207ENST00000558218 TP53RKQ96S44 253 aa7.58□□□□□ -1.2
USP3-207ENST00000558218 PDCD10Q9BUL8 212 aa7.58□□□□□ -1.2
USP3-207ENST00000558218 HIPK2Q9H2X6 1198 aa7.58□□□□□ -1.2
USP3-207ENST00000558218 CCDC59Q9P031 241 aaKnown RBP7.58□□□□□ -1.2
USP3-207ENST00000558218 RSL24D1Q9UHA3 163 aaKnown RBP7.58□□□□□ -1.2
USP3-207ENST00000558218 A0A0B4J293 547 aa7.57□□□□□ -1.2
USP3-207ENST00000558218 RBMY1BA6NDE4 496 aaKnown RBP7.57□□□□□ -1.2
USP3-207ENST00000558218 RBMY1EA6NEQ0 496 aaKnown RBP7.57□□□□□ -1.2
USP3-207ENST00000558218 GSTZ1O43708 216 aaPredicted RBP7.57□□□□□ -1.2
USP3-207ENST00000558218 RBMY1DP0C7P1 496 aaKnown RBP7.57□□□□□ -1.2
USP3-207ENST00000558218 AKAIN1P0CW23 69 aa7.57□□□□□ -1.2
USP3-207ENST00000558218 PI3P19957 117 aa7.57□□□□□ -1.2
USP3-207ENST00000558218 NPBWR1P48145 328 aa7.57□□□□□ -1.2
USP3-207ENST00000558218 AKR1C2P52895 323 aa7.57□□□□□ -1.2
USP3-207ENST00000558218 DHODHQ02127 395 aa7.57□□□□□ -1.2
USP3-207ENST00000558218 ZNF124Q15973 351 aa7.57□□□□□ -1.2
USP3-207ENST00000558218 AARDQ4LEZ3 155 aa7.57□□□□□ -1.2
USP3-207ENST00000558218 Q56UQ5 140 aa7.57□□□□□ -1.2
USP3-207ENST00000558218 BTNL8Q6UX41 500 aa7.57□□□□□ -1.2
USP3-207ENST00000558218 DEFB125Q8N687 156 aa7.57□□□□□ -1.2
USP3-207ENST00000558218 DUSP18Q8NEJ0 188 aa7.57□□□□□ -1.2
USP3-207ENST00000558218 OR13C8Q8NGS7 320 aa7.57□□□□□ -1.2
USP3-207ENST00000558218 OR52E5Q8NH55 327 aa7.57□□□□□ -1.2
USP3-207ENST00000558218 OR10C1Q96KK4 312 aa7.57□□□□□ -1.2
USP3-207ENST00000558218 PRRT1Q99946 306 aa7.57□□□□□ -1.2
USP3-207ENST00000558218 CHRDL1Q9BU40 450 aa7.57□□□□□ -1.2
USP3-207ENST00000558218 NXF2Q9GZY0 626 aaKnown RBP7.57□□□□□ -1.2
USP3-207ENST00000558218 TMEM222Q9H0R3 208 aa7.57□□□□□ -1.2
USP3-207ENST00000558218 SRD5A3Q9H8P0 318 aa7.57□□□□□ -1.2
USP3-207ENST00000558218 C14orf166Q9Y224 244 aaKnown RBP7.57□□□□□ -1.2
USP3-207ENST00000558218 PIGBOS1A0A0B4J2F0 54 aa7.56□□□□□ -1.2
USP3-207ENST00000558218 TEX13DA0A0J9YY54 714 aaPredicted RBP7.56□□□□□ -1.2
USP3-207ENST00000558218 NOL3O60936 208 aaKnown RBP7.56□□□□□ -1.2
USP3-207ENST00000558218 MT-CO2P00403 227 aa7.56□□□□□ -1.2
USP3-207ENST00000558218 IFNA17P01571 189 aa7.56□□□□□ -1.2
USP3-207ENST00000558218 IGKV1-5P01602 117 aa7.56□□□□□ -1.2
USP3-207ENST00000558218 EDN2P20800 178 aa7.56□□□□□ -1.2
USP3-207ENST00000558218 IL18Q14116 193 aa7.56□□□□□ -1.2
USP3-207ENST00000558218 TRIM16LQ309B1 348 aa7.56□□□□□ -1.2
USP3-207ENST00000558218 SCGB2B2Q4G0G5 96 aa7.56□□□□□ -1.2
USP3-207ENST00000558218 RNASE12Q5GAN4 147 aaKnown RBP7.56□□□□□ -1.2
USP3-207ENST00000558218 OR4D10Q8NGI6 311 aa7.56□□□□□ -1.2
USP3-207ENST00000558218 MARCH1Q8TCQ1 289 aa7.56□□□□□ -1.2
USP3-207ENST00000558218 GLYATL2Q8WU03 294 aa7.56□□□□□ -1.2
USP3-207ENST00000558218 SOSTQ9BQB4 213 aa7.56□□□□□ -1.2
USP3-207ENST00000558218 RTBDNQ9BSG5 229 aaPredicted RBP7.56□□□□□ -1.2
USP3-207ENST00000558218 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.56□□□□□ -1.2
USP3-207ENST00000558218 SMPXQ9UHP9 88 aa7.56□□□□□ -1.2
USP3-207ENST00000558218 GPR132Q9UNW8 380 aa7.56□□□□□ -1.2
USP3-207ENST00000558218 KCNIP3Q9Y2W7 256 aa7.56□□□□□ -1.2
USP3-207ENST00000558218 LOC102724200A0A096LPH7 203 aaPredicted RBP7.55□□□□□ -1.2
USP3-207ENST00000558218 IGHV3-35A0A0C4DH35 117 aa7.55□□□□□ -1.2
USP3-207ENST00000558218 OR4C46A6NHA9 309 aa7.55□□□□□ -1.2
USP3-207ENST00000558218 UBE2CO00762 179 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms