RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 THOC2Q8NI27 1593 aaKnown RBP1.73□□□□□ -2.13
SPG11-206ENST00000558093 TRPM6Q9BX84 2022 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 MAP3K1Q13233 1512 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 ZFYVE16Q7Z3T8 1539 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 TRBV19A0A075B6N1 114 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 TRAV8-1A0A0A6YYK1 113 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 IGHV2-26A0A0B4J1V2 119 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 TRDV1A0A1B0GX56 115 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 TMEM212A6NML5 194 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 OR4C45A6NMZ5 311 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 IFITM5A6NNB3 132 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 C1orf196B1AJZ1 125 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 F5H5P2 479 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 GABARAPH6UMI1 98 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 J3QQQ9 107 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 M0R381 172 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 NPFFO15130 113 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 DPM2O94777 84 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 GABARAPO95166 117 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 IFNA7P01567 189 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 MAS1P04201 325 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 HLA-DQB2P05538 268 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 UCHL1P09936 223 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 CECR9P0C854 216 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 IGLC6P0CF74 106 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 AKAIN1P0CW23 69 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 INAFM2P0DMQ5 153 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 PPIBP23284 216 aaKnown RBP1.73□□□□□ -2.13
SPG11-206ENST00000558093 FKBP2P26885 142 aaKnown RBP1.73□□□□□ -2.13
SPG11-206ENST00000558093 BRS3P32247 399 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 POLR2IP36954 125 aaKnown RBP1.73□□□□□ -2.13
SPG11-206ENST00000558093 CCR2P41597 374 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 FKBP1AP62942 108 aaKnown RBP1.73□□□□□ -2.13
SPG11-206ENST00000558093 GRB2P62993 217 aaKnown RBP1.73□□□□□ -2.13
SPG11-206ENST00000558093 GNA12Q03113 381 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 LOXL1Q08397 574 aaPredicted RBP1.73□□□□□ -2.13
SPG11-206ENST00000558093 ADIGQ0VDE8 80 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 EIF3IQ13347 325 aaKnown RBP1.73□□□□□ -2.13
SPG11-206ENST00000558093 ZNF404Q494X3 552 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 KRTAP13-2Q52LG2 175 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 TCEAL5Q5H9L2 206 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 PRR9Q5T870 116 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 HES3Q5TGS1 186 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 GTF2H5Q6ZYL4 71 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 SLC25A45Q8N413 288 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 YIPF7Q8N8F6 280 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 ZDHHC22Q8N966 263 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 ZIC4Q8N9L1 334 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.73□□□□□ -2.13
SPG11-206ENST00000558093 NUP35Q8NFH5 326 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 OR52R1Q8NGF1 315 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 OR51T1Q8NGJ9 327 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 TWIST2Q8WVJ9 160 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 PP6455Q8WZ26 134 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 BORCS8Q96FH0 119 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 ADAT1Q9BUB4 502 aaKnown RBP1.73□□□□□ -2.13
SPG11-206ENST00000558093 ZNF471Q9BX82 626 aaPredicted RBP1.73□□□□□ -2.13
SPG11-206ENST00000558093 COMMD5Q9GZQ3 224 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 EIF5A2Q9GZV4 153 aaKnown RBP1.73□□□□□ -2.13
SPG11-206ENST00000558093 LINC00597Q9H2U6 94 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 ZNRD1Q9P1U0 126 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 NAT8Q9UHE5 227 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 MCTS1Q9ULC4 181 aaKnown RBP1.73□□□□□ -2.13
SPG11-206ENST00000558093 ZNF706Q9Y5V0 76 aaPredicted RBP1.73□□□□□ -2.13
SPG11-206ENST00000558093 SOX21Q9Y651 276 aaPredicted RBP1.73□□□□□ -2.13
SPG11-206ENST00000558093 ABCA3Q99758 1704 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 SIGLEC1Q9BZZ2 1709 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 PZPP20742 1482 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 MYH8P13535 1937 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 ALPK3Q96L96 1907 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 MYH4Q9Y623 1939 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 THSD7AQ9UPZ6 1657 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 DCCP43146 1447 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 ARHGAP31Q2M1Z3 1444 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 DOCK8Q8NF50 2099 aa1.73□□□□□ -2.13
SPG11-206ENST00000558093 MAST2Q6P0Q8 1798 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 CASZ1Q86V15 1759 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 BCL9LQ86UU0 1499 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 IFT140Q96RY7 1462 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 IGHV6-1A0A0B4J1U7 121 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 CCL15-CCL14A0A0B4J2E2 113 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 A0A1B0GVX0 72 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 KRBOX1C9JBD0 128 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 CCDC179H3BU77 68 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 M0R1X1 148 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 UPK1AO00322 258 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 UBFD1O14562 309 aaKnown RBP1.72□□□□□ -2.13
SPG11-206ENST00000558093 GSTZ1O43708 216 aaPredicted RBP1.72□□□□□ -2.13
SPG11-206ENST00000558093 LYZL6O75951 148 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 APODP05090 189 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 GPX1P07203 203 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 PAEPP09466 180 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 RNASE2P10153 161 aaKnown RBP1.72□□□□□ -2.13
SPG11-206ENST00000558093 S100A2P29034 98 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 PSMB3P49720 205 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 INSL3P51460 131 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 LINC00313P59037 77 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 UBE2NP61088 152 aaKnown RBP1.72□□□□□ -2.13
SPG11-206ENST00000558093 RHOGP84095 191 aa1.72□□□□□ -2.13
SPG11-206ENST00000558093 MEF2BQ02080 365 aaPredicted RBP1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms