RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 BSCL2Q96G97 398 aaPredicted RBP6.6□□□□□ -1.35
SNRPA1-206ENST00000558059 ZNF414Q96IQ9 312 aa6.6□□□□□ -1.35
SNRPA1-206ENST00000558059 NEURL2Q9BR09 285 aa6.6□□□□□ -1.35
SNRPA1-206ENST00000558059 C6orf62Q9GZU0 229 aaPredicted RBP6.6□□□□□ -1.35
SNRPA1-206ENST00000558059 C5orf66Q9H5L9 145 aa6.6□□□□□ -1.35
SNRPA1-206ENST00000558059 ZMAT4Q9H898 229 aa6.6□□□□□ -1.35
SNRPA1-206ENST00000558059 PALMDQ9NP74 551 aa6.6□□□□□ -1.35
SNRPA1-206ENST00000558059 SLC2A8Q9NY64 477 aa6.6□□□□□ -1.35
SNRPA1-206ENST00000558059 COPZ2Q9P299 210 aa6.6□□□□□ -1.35
SNRPA1-206ENST00000558059 A0A0G2JRQ6 117 aa6.59□□□□□ -1.35
SNRPA1-206ENST00000558059 ANKRD20A5PA0PJZ0 165 aa6.59□□□□□ -1.35
SNRPA1-206ENST00000558059 DISC1C4P0D8 188 aa6.59□□□□□ -1.35
SNRPA1-206ENST00000558059 ST8SIA3O43173 380 aa6.59□□□□□ -1.35
SNRPA1-206ENST00000558059 NOL3O60936 208 aaKnown RBP6.59□□□□□ -1.35
SNRPA1-206ENST00000558059 CTSGP08311 255 aa6.59□□□□□ -1.35
SNRPA1-206ENST00000558059 CD81P60033 236 aa6.59□□□□□ -1.35
SNRPA1-206ENST00000558059 ERHP84090 104 aaKnown RBP6.59□□□□□ -1.35
SNRPA1-206ENST00000558059 SURF2Q15527 256 aaPredicted RBP6.59□□□□□ -1.35
SNRPA1-206ENST00000558059 GUCA2BQ16661 112 aa6.59□□□□□ -1.35
SNRPA1-206ENST00000558059 SPINK9Q5DT21 86 aa6.59□□□□□ -1.35
SNRPA1-206ENST00000558059 Q6ZRM9 215 aa6.59□□□□□ -1.35
SNRPA1-206ENST00000558059 DEFB125Q8N687 156 aa6.59□□□□□ -1.35
SNRPA1-206ENST00000558059 MCFD2Q8NI22 146 aa6.59□□□□□ -1.35
SNRPA1-206ENST00000558059 LHFPL5Q8TAF8 219 aa6.59□□□□□ -1.35
SNRPA1-206ENST00000558059 GLYATL2Q8WU03 294 aa6.59□□□□□ -1.35
SNRPA1-206ENST00000558059 MARC2Q969Z3 335 aa6.59□□□□□ -1.35
SNRPA1-206ENST00000558059 WFDC10AQ9H1F0 79 aa6.59□□□□□ -1.35
SNRPA1-206ENST00000558059 TUBA4BQ9H853 241 aa6.59□□□□□ -1.35
SNRPA1-206ENST00000558059 PLEKHA3Q9HB20 300 aa6.59□□□□□ -1.35
SNRPA1-206ENST00000558059 MRPL27Q9P0M9 148 aaKnown RBP6.59□□□□□ -1.35
SNRPA1-206ENST00000558059 RSL24D1Q9UHA3 163 aaKnown RBP6.59□□□□□ -1.35
SNRPA1-206ENST00000558059 GPR132Q9UNW8 380 aa6.59□□□□□ -1.35
SNRPA1-206ENST00000558059 UFC1Q9Y3C8 167 aa6.59□□□□□ -1.35
SNRPA1-206ENST00000558059 TENM2Q9NT68 2774 aa6.59□□□□□ -1.35
SNRPA1-206ENST00000558059 LYSTQ99698 3801 aa6.58□□□□□ -1.36
SNRPA1-206ENST00000558059 TEX13DA0A0J9YY54 714 aaPredicted RBP6.58□□□□□ -1.36
SNRPA1-206ENST00000558059 RBMY1BA6NDE4 496 aaKnown RBP6.58□□□□□ -1.36
SNRPA1-206ENST00000558059 RBMY1EA6NEQ0 496 aaKnown RBP6.58□□□□□ -1.36
SNRPA1-206ENST00000558059 FABP12A6NFH5 140 aa6.58□□□□□ -1.36
SNRPA1-206ENST00000558059 OR11H12B2RN74 326 aa6.58□□□□□ -1.36
SNRPA1-206ENST00000558059 INS-IGF2F8WCM5 200 aa6.58□□□□□ -1.36
SNRPA1-206ENST00000558059 NDUFA4O00483 81 aa6.58□□□□□ -1.36
SNRPA1-206ENST00000558059 B3GALNT1O75752 331 aa6.58□□□□□ -1.36
SNRPA1-206ENST00000558059 ATG12O94817 140 aa6.58□□□□□ -1.36
SNRPA1-206ENST00000558059 CDS2O95674 445 aa6.58□□□□□ -1.36
SNRPA1-206ENST00000558059 MT-CO2P00403 227 aa6.58□□□□□ -1.36
SNRPA1-206ENST00000558059 OR5AC1P0C628 307 aa6.58□□□□□ -1.36
SNRPA1-206ENST00000558059 RBMY1DP0C7P1 496 aaKnown RBP6.58□□□□□ -1.36
SNRPA1-206ENST00000558059 FCGR2BP31994 310 aaPredicted RBP6.58□□□□□ -1.36
SNRPA1-206ENST00000558059 ETV6P41212 452 aa6.58□□□□□ -1.36
SNRPA1-206ENST00000558059 AKR1C2P52895 323 aa6.58□□□□□ -1.36
SNRPA1-206ENST00000558059 MFAP4P55083 255 aa6.58□□□□□ -1.36
SNRPA1-206ENST00000558059 TRIM16LQ309B1 348 aa6.58□□□□□ -1.36
SNRPA1-206ENST00000558059 Q56UQ5 140 aa6.58□□□□□ -1.36
SNRPA1-206ENST00000558059 PVRIGQ6DKI7 326 aa6.58□□□□□ -1.36
SNRPA1-206ENST00000558059 BTNL8Q6UX41 500 aa6.58□□□□□ -1.36
SNRPA1-206ENST00000558059 UBAC2Q8NBM4 344 aa6.58□□□□□ -1.36
SNRPA1-206ENST00000558059 OR51S1Q8NGJ8 323 aa6.58□□□□□ -1.36
SNRPA1-206ENST00000558059 MISP3Q96FF7 219 aa6.58□□□□□ -1.36
SNRPA1-206ENST00000558059 PRRT1Q99946 306 aa6.58□□□□□ -1.36
SNRPA1-206ENST00000558059 TMEM222Q9H0R3 208 aa6.58□□□□□ -1.36
SNRPA1-206ENST00000558059 NAA60Q9H7X0 242 aa6.58□□□□□ -1.36
SNRPA1-206ENST00000558059 C14orf166Q9Y224 244 aaKnown RBP6.58□□□□□ -1.36
SNRPA1-206ENST00000558059 STARD9Q9P2P6 4700 aa6.57□□□□□ -1.36
SNRPA1-206ENST00000558059 IGHV3OR16-8A0A075B7F1 116 aa6.57□□□□□ -1.36
SNRPA1-206ENST00000558059 TRAV25A0A0B4J276 109 aa6.57□□□□□ -1.36
SNRPA1-206ENST00000558059 KRTAP4-8A0A0G2JLE6 195 aa6.57□□□□□ -1.36
SNRPA1-206ENST00000558059 CRYM-AS1A6NIL9 109 aa6.57□□□□□ -1.36
SNRPA1-206ENST00000558059 C3orf84H3BNL1 204 aa6.57□□□□□ -1.36
SNRPA1-206ENST00000558059 FAM229AH3BQW9 127 aa6.57□□□□□ -1.36
SNRPA1-206ENST00000558059 K7EMT4 169 aa6.57□□□□□ -1.36
SNRPA1-206ENST00000558059 ZNF207O43670 478 aaKnown RBP6.57□□□□□ -1.36
SNRPA1-206ENST00000558059 SCAF4O95104 1147 aaKnown RBP6.57□□□□□ -1.36
SNRPA1-206ENST00000558059 IFNA17P01571 189 aa6.57□□□□□ -1.36
SNRPA1-206ENST00000558059 IGHV3-48P01763 117 aa6.57□□□□□ -1.36
SNRPA1-206ENST00000558059 AARDQ4LEZ3 155 aa6.57□□□□□ -1.36
SNRPA1-206ENST00000558059 SELENOHQ8IZQ5 122 aaKnown RBP6.57□□□□□ -1.36
SNRPA1-206ENST00000558059 TMEM230Q96A57 120 aa6.57□□□□□ -1.36
SNRPA1-206ENST00000558059 GPR146Q96CH1 333 aa6.57□□□□□ -1.36
SNRPA1-206ENST00000558059 RRNAD1Q96FB5 475 aaKnown RBP6.57□□□□□ -1.36
SNRPA1-206ENST00000558059 CITED4Q96RK1 184 aa6.57□□□□□ -1.36
SNRPA1-206ENST00000558059 TXN2Q99757 166 aa6.57□□□□□ -1.36
SNRPA1-206ENST00000558059 SPATA25Q9BR10 227 aa6.57□□□□□ -1.36
SNRPA1-206ENST00000558059 RBM38Q9H0Z9 239 aaKnown RBP6.57□□□□□ -1.36
SNRPA1-206ENST00000558059 DAZ1Q9NQZ3 744 aaKnown RBP6.57□□□□□ -1.36
SNRPA1-206ENST00000558059 GAR1Q9NY12 217 aaKnown RBP6.57□□□□□ -1.36
SNRPA1-206ENST00000558059 SACSQ9NZJ4 4579 aa6.56□□□□□ -1.36
SNRPA1-206ENST00000558059 C15orf62A8K5M9 175 aa6.56□□□□□ -1.36
SNRPA1-206ENST00000558059 NUPL2O15504 423 aaKnown RBP6.56□□□□□ -1.36
SNRPA1-206ENST00000558059 RNASE2P10153 161 aaKnown RBP6.56□□□□□ -1.36
SNRPA1-206ENST00000558059 SNCAP37840 140 aa6.56□□□□□ -1.36
SNRPA1-206ENST00000558059 DHODHQ02127 395 aa6.56□□□□□ -1.36
SNRPA1-206ENST00000558059 KLF9Q13886 244 aaPredicted RBP6.56□□□□□ -1.36
SNRPA1-206ENST00000558059 RBPMS2Q6ZRY4 209 aaKnown RBP6.56□□□□□ -1.36
SNRPA1-206ENST00000558059 SLC16A13Q7RTY0 426 aa6.56□□□□□ -1.36
SNRPA1-206ENST00000558059 FAM219AQ8IW50 185 aa6.56□□□□□ -1.36
SNRPA1-206ENST00000558059 SLC35G3Q8N808 338 aa6.56□□□□□ -1.36
SNRPA1-206ENST00000558059 OR52B4Q8NGK2 314 aa6.56□□□□□ -1.36
SNRPA1-206ENST00000558059 MUC7Q8TAX7 377 aa6.56□□□□□ -1.36
SNRPA1-206ENST00000558059 RBPMSQ93062 196 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms