RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 RASSF5Q8WWW0 418 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 H1FXQ92522 213 aaKnown RBP1.1□□□□□ -2.23
GPHN-216ENST00000557678 MALSU1Q96EH3 234 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 SCGB3A1Q96QR1 104 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 GPER1Q99527 375 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 Q9BRP9 147 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 GINS3Q9BRX5 216 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 TTTY13Q9BZ97 58 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 IMUPQ9GZP8 106 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 RNASE7Q9H1E1 156 aaKnown RBP1.1□□□□□ -2.23
GPHN-216ENST00000557678 SH3BGRL3Q9H299 93 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 SLC39A9Q9NUM3 307 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 HHLA3Q9XRX5 114 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 CYSLTR1Q9Y271 337 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 MINOS1-NBL1R4GNA1 71 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 MYH2Q9UKX2 1941 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 PLXND1Q9Y4D7 1925 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 DENND4BO75064 1496 aaPredicted RBP1.1□□□□□ -2.23
GPHN-216ENST00000557678 SCN9AQ15858 1988 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 SLIT2O94813 1529 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 WDR90Q96KV7 1748 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 IGHV3-64A0A075B6Q5 118 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 TRAV7A0A075B6U4 112 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 TRAV41A0A0B4J266 112 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 TRAV4A0A0B4J268 109 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 A0A1W2PNN7 141 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 H7C1C5 153 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 H7C2G1 150 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 ZNF73O43830 326 aaPredicted RBP1.09□□□□□ -2.23
GPHN-216ENST00000557678 OR2J2O76002 312 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 C1QBP02746 253 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 LGALS1P09382 135 aaKnown RBP1.09□□□□□ -2.23
GPHN-216ENST00000557678 METTL15P1P0C7V9 234 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 SMIM17P0DL12 118 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 RPS4Y1P22090 263 aaKnown RBP1.09□□□□□ -2.23
GPHN-216ENST00000557678 PHBP35232 272 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 G6PCP35575 357 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 FXYD2P54710 66 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 TAS2R41P59536 307 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 TMEM258P61165 79 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 NCALDP61601 193 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 LCN6P62502 163 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 TFAMQ00059 246 aaKnown RBP1.09□□□□□ -2.23
GPHN-216ENST00000557678 MIR17HGQ75NE6 70 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 GRINAQ7Z429 371 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 TMEM86AQ8N2M4 240 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 C12orf45Q8N5I9 185 aaPredicted RBP1.09□□□□□ -2.23
GPHN-216ENST00000557678 PACRGLQ8N7B6 248 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 ZNF439Q8NDP4 499 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 SLC25A40Q8TBP6 338 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 C11orf40Q8WZ69 217 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 DNAJC30Q96LL9 226 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 C20orf166-AS1Q96NR2 134 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 IMMP2LQ96T52 175 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 SERPINI1Q99574 410 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 HOPXQ9BPY8 73 aaPredicted RBP1.09□□□□□ -2.23
GPHN-216ENST00000557678 DOHHQ9BU89 302 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 PBDC1Q9BVG4 233 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 CHST6Q9GZX3 395 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 PBOV1Q9GZY1 135 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 PCBD2Q9H0N5 130 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 ACER3Q9NUN7 267 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 PRNDQ9UKY0 176 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 SSR3Q9UNL2 185 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 ERGIC3Q9Y282 383 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 UTP11Q9Y3A2 253 aaKnown RBP1.09□□□□□ -2.23
GPHN-216ENST00000557678 TIMM22Q9Y584 194 aa1.09□□□□□ -2.23
GPHN-216ENST00000557678 NCAPD3P42695 1498 aa1.09□□□□□ -2.24
GPHN-216ENST00000557678 MYH3P11055 1940 aa1.09□□□□□ -2.24
GPHN-216ENST00000557678 RIC1Q4ADV7 1423 aa1.08□□□□□ -2.24
GPHN-216ENST00000557678 UHRF1BP1Q6BDS2 1440 aa1.08□□□□□ -2.24
GPHN-216ENST00000557678 ZNF106Q9H2Y7 1883 aaKnown RBP1.08□□□□□ -2.24
GPHN-216ENST00000557678 MUC21A0A0G2JKD1 596 aa1.08□□□□□ -2.24
GPHN-216ENST00000557678 TRBV10-2A0A0K0K1G8 114 aa1.08□□□□□ -2.24
GPHN-216ENST00000557678 MUC21A0A140T8X8 626 aa1.08□□□□□ -2.24
GPHN-216ENST00000557678 MDFIC2A0A1B0GVS7 189 aa1.08□□□□□ -2.24
GPHN-216ENST00000557678 H0YJX3 145 aa1.08□□□□□ -2.24
GPHN-216ENST00000557678 LY6LH3BQJ8 138 aa1.08□□□□□ -2.24
GPHN-216ENST00000557678 H3BT86 120 aa1.08□□□□□ -2.24
GPHN-216ENST00000557678 GGCTO75223 188 aaKnown RBP1.08□□□□□ -2.24
GPHN-216ENST00000557678 S1PR2O95136 353 aa1.08□□□□□ -2.24
GPHN-216ENST00000557678 TCL1BO95988 128 aa1.08□□□□□ -2.24
GPHN-216ENST00000557678 CRHP06850 196 aa1.08□□□□□ -2.24
GPHN-216ENST00000557678 P0C880 135 aa1.08□□□□□ -2.24
GPHN-216ENST00000557678 CCL5P13501 91 aa1.08□□□□□ -2.24
GPHN-216ENST00000557678 IDO1P14902 403 aa1.08□□□□□ -2.24
GPHN-216ENST00000557678 RPL28P46779 137 aaKnown RBP1.08□□□□□ -2.24
GPHN-216ENST00000557678 ZNF80P51504 273 aaPredicted RBP1.08□□□□□ -2.24
GPHN-216ENST00000557678 PIGPP57054 158 aa1.08□□□□□ -2.24
GPHN-216ENST00000557678 DEFA1P59665 94 aa1.08□□□□□ -2.24
GPHN-216ENST00000557678 RHOBP62745 196 aa1.08□□□□□ -2.24
GPHN-216ENST00000557678 ERHP84090 104 aaKnown RBP1.08□□□□□ -2.24
GPHN-216ENST00000557678 RELAQ04206 551 aa1.08□□□□□ -2.24
GPHN-216ENST00000557678 KRTAP13-4Q3LI77 160 aa1.08□□□□□ -2.24
GPHN-216ENST00000557678 HCP5Q6MZN7 132 aa1.08□□□□□ -2.24
GPHN-216ENST00000557678 AKAP14Q86UN6 197 aa1.08□□□□□ -2.24
GPHN-216ENST00000557678 HIST3H2BBQ8N257 126 aa1.08□□□□□ -2.24
GPHN-216ENST00000557678 STX19Q8N4C7 294 aa1.08□□□□□ -2.24
GPHN-216ENST00000557678 OR51T1Q8NGJ9 327 aa1.08□□□□□ -2.24
GPHN-216ENST00000557678 TERB2Q8NHR7 220 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms