RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 CELSR3Q9NYQ7 3312 aa9.65□□□□□ -0.86
VIPAS39-211ENST00000557658 TCF21O43680 179 aa9.65□□□□□ -0.86
VIPAS39-211ENST00000557658 IGHG3P01860 377 aa9.65□□□□□ -0.86
VIPAS39-211ENST00000557658 PMCHL1Q16048 86 aa9.65□□□□□ -0.86
VIPAS39-211ENST00000557658 C9orf106Q8NAJ2 232 aa9.65□□□□□ -0.86
VIPAS39-211ENST00000557658 C18orf32Q8TCD1 76 aa9.65□□□□□ -0.86
VIPAS39-211ENST00000557658 OR2V2Q96R30 315 aa9.65□□□□□ -0.86
VIPAS39-211ENST00000557658 TANC2Q9HCD6 1990 aa9.65□□□□□ -0.86
VIPAS39-211ENST00000557658 UBE2L3P68036 154 aaKnown RBP9.65□□□□□ -0.87
VIPAS39-211ENST00000557658 SLAQ13239 276 aa9.65□□□□□ -0.87
VIPAS39-211ENST00000557658 OR1L8Q8NGR8 309 aa9.65□□□□□ -0.87
VIPAS39-211ENST00000557658 OR9G1Q8NH87 305 aa9.65□□□□□ -0.87
VIPAS39-211ENST00000557658 DMDP11532 3685 aa9.64□□□□□ -0.87
VIPAS39-211ENST00000557658 TEX50A0A1B0GTY4 177 aa9.64□□□□□ -0.87
VIPAS39-211ENST00000557658 CA1P00915 261 aaPredicted RBP9.64□□□□□ -0.87
VIPAS39-211ENST00000557658 NHLRC2Q8NBF2 726 aa9.64□□□□□ -0.87
VIPAS39-211ENST00000557658 PPIAL4AQ9Y536 164 aa9.64□□□□□ -0.87
VIPAS39-211ENST00000557658 DSCAMO60469 2012 aa9.64□□□□□ -0.87
VIPAS39-211ENST00000557658 HSBP1O75506 76 aa9.64□□□□□ -0.87
VIPAS39-211ENST00000557658 RNASE2P10153 161 aaKnown RBP9.64□□□□□ -0.87
VIPAS39-211ENST00000557658 CD69Q07108 199 aa9.64□□□□□ -0.87
VIPAS39-211ENST00000557658 FAM231DQ6ZW35 169 aa9.64□□□□□ -0.87
VIPAS39-211ENST00000557658 OR5B3Q8NH48 314 aa9.64□□□□□ -0.87
VIPAS39-211ENST00000557658 FAM168AQ92567 244 aa9.64□□□□□ -0.87
VIPAS39-211ENST00000557658 SSBP3Q9BWW4 388 aaPredicted RBP9.64□□□□□ -0.87
VIPAS39-211ENST00000557658 CLEC7AQ9BXN2 247 aa9.64□□□□□ -0.87
VIPAS39-211ENST00000557658 C20orf202A1L168 122 aa9.63□□□□□ -0.87
VIPAS39-211ENST00000557658 NDUFB8O95169 186 aa9.63□□□□□ -0.87
VIPAS39-211ENST00000557658 LHBP01229 141 aa9.63□□□□□ -0.87
VIPAS39-211ENST00000557658 GNG10P50151 68 aa9.63□□□□□ -0.87
VIPAS39-211ENST00000557658 MFAP2P55001 183 aa9.63□□□□□ -0.87
VIPAS39-211ENST00000557658 ORAOV1Q8WV07 137 aa9.63□□□□□ -0.87
VIPAS39-211ENST00000557658 GRAMD2BQ96HH9 432 aa9.63□□□□□ -0.87
VIPAS39-211ENST00000557658 FAM167A-AS1Q96KT0 104 aa9.63□□□□□ -0.87
VIPAS39-211ENST00000557658 CHRDL1Q9BU40 450 aa9.63□□□□□ -0.87
VIPAS39-211ENST00000557658 SLC25A2Q9BXI2 301 aa9.63□□□□□ -0.87
VIPAS39-211ENST00000557658 ARRDC1-AS1Q9H2J1 176 aa9.63□□□□□ -0.87
VIPAS39-211ENST00000557658 MRPS16Q9Y3D3 137 aaKnown RBP9.63□□□□□ -0.87
VIPAS39-211ENST00000557658 AMMECR1Q9Y4X0 333 aaPredicted RBP9.63□□□□□ -0.87
VIPAS39-211ENST00000557658 CACNA1GO43497 2377 aa9.63□□□□□ -0.87
VIPAS39-211ENST00000557658 PCNX2A6NKB5 2137 aa9.63□□□□□ -0.87
VIPAS39-211ENST00000557658 TRAV34A0A0B4J273 112 aa9.63□□□□□ -0.87
VIPAS39-211ENST00000557658 TSPOP30536 169 aa9.63□□□□□ -0.87
VIPAS39-211ENST00000557658 MLANAQ16655 118 aa9.63□□□□□ -0.87
VIPAS39-211ENST00000557658 MSMPQ1L6U9 139 aa9.63□□□□□ -0.87
VIPAS39-211ENST00000557658 SPRNQ5BIV9 151 aa9.63□□□□□ -0.87
VIPAS39-211ENST00000557658 BHLHA15Q7RTS1 189 aaPredicted RBP9.63□□□□□ -0.87
VIPAS39-211ENST00000557658 SPACA3Q8IXA5 215 aa9.63□□□□□ -0.87
VIPAS39-211ENST00000557658 ATOH7Q8N100 152 aa9.63□□□□□ -0.87
VIPAS39-211ENST00000557658 CACNG8Q8WXS5 425 aa9.63□□□□□ -0.87
VIPAS39-211ENST00000557658 MBD6Q96DN6 1003 aa9.63□□□□□ -0.87
VIPAS39-211ENST00000557658 SAP30LQ9HAJ7 183 aa9.63□□□□□ -0.87
VIPAS39-211ENST00000557658 PLSCR4Q9NRQ2 329 aa9.63□□□□□ -0.87
VIPAS39-211ENST00000557658 BET1LQ9NYM9 111 aa9.63□□□□□ -0.87
VIPAS39-211ENST00000557658 INTS1Q8N201 2190 aaKnown RBP9.62□□□□□ -0.87
VIPAS39-211ENST00000557658 TRAV5A0A0B4J249 113 aa9.62□□□□□ -0.87
VIPAS39-211ENST00000557658 PRR33A8MZF0 331 aa9.62□□□□□ -0.87
VIPAS39-211ENST00000557658 CT45A6P0DMU7 189 aa9.62□□□□□ -0.87
VIPAS39-211ENST00000557658 CT45A5P0DMU8 189 aa9.62□□□□□ -0.87
VIPAS39-211ENST00000557658 CT45A7P0DMV0 189 aa9.62□□□□□ -0.87
VIPAS39-211ENST00000557658 KLF5Q13887 457 aaPredicted RBP9.62□□□□□ -0.87
VIPAS39-211ENST00000557658 TNXAQ16473 311 aa9.62□□□□□ -0.87
VIPAS39-211ENST00000557658 TBR1Q16650 682 aa9.62□□□□□ -0.87
VIPAS39-211ENST00000557658 LINC00479Q96M42 142 aa9.62□□□□□ -0.87
VIPAS39-211ENST00000557658 ZNF714Q96N38 554 aa9.62□□□□□ -0.87
VIPAS39-211ENST00000557658 ZNF355PQ9NSJ1 428 aa9.62□□□□□ -0.87
VIPAS39-211ENST00000557658 TRIOBPQ9H2D6 2365 aa9.62□□□□□ -0.87
VIPAS39-211ENST00000557658 FAM181BA6NEQ2 426 aa9.62□□□□□ -0.87
VIPAS39-211ENST00000557658 SRRM4A7MD48 611 aaKnown RBP9.62□□□□□ -0.87
VIPAS39-211ENST00000557658 M0R2Z0 102 aa9.62□□□□□ -0.87
VIPAS39-211ENST00000557658 DLL1O00548 723 aa9.62□□□□□ -0.87
VIPAS39-211ENST00000557658 SPRY3O43610 288 aa9.62□□□□□ -0.87
VIPAS39-211ENST00000557658 IGKV1-16P04430 117 aa9.62□□□□□ -0.87
VIPAS39-211ENST00000557658 FAM169BQ8N8A8 192 aa9.62□□□□□ -0.87
VIPAS39-211ENST00000557658 NUP35Q8NFH5 326 aa9.62□□□□□ -0.87
VIPAS39-211ENST00000557658 ITLN1Q8WWA0 313 aa9.62□□□□□ -0.87
VIPAS39-211ENST00000557658 ZNF71Q9NQZ8 489 aaPredicted RBP9.62□□□□□ -0.87
VIPAS39-211ENST00000557658 ZDBF2Q9HCK1 2354 aa9.61□□□□□ -0.87
VIPAS39-211ENST00000557658 TRAV9-2A0A087WT02 112 aa9.61□□□□□ -0.87
VIPAS39-211ENST00000557658 PSMB11A5LHX3 300 aa9.61□□□□□ -0.87
VIPAS39-211ENST00000557658 PEX7O00628 323 aa9.61□□□□□ -0.87
VIPAS39-211ENST00000557658 COX7A2P2O60397 106 aa9.61□□□□□ -0.87
VIPAS39-211ENST00000557658 SAA1P0DJI8 122 aaPredicted RBP9.61□□□□□ -0.87
VIPAS39-211ENST00000557658 KLF3P57682 345 aaPredicted RBP9.61□□□□□ -0.87
VIPAS39-211ENST00000557658 TMEM30BQ3MIR4 351 aa9.61□□□□□ -0.87
VIPAS39-211ENST00000557658 FAM201AQ5SY85 155 aa9.61□□□□□ -0.87
VIPAS39-211ENST00000557658 MORN5Q5VZ52 161 aa9.61□□□□□ -0.87
VIPAS39-211ENST00000557658 LCN12Q6JVE5 192 aa9.61□□□□□ -0.87
VIPAS39-211ENST00000557658 NUDT10Q8NFP7 164 aa9.61□□□□□ -0.87
VIPAS39-211ENST00000557658 SARAFQ96BY9 339 aa9.61□□□□□ -0.87
VIPAS39-211ENST00000557658 NUDT11Q96G61 164 aa9.61□□□□□ -0.87
VIPAS39-211ENST00000557658 PAXXQ9BUH6 204 aa9.61□□□□□ -0.87
VIPAS39-211ENST00000557658 PROCRQ9UNN8 238 aa9.61□□□□□ -0.87
VIPAS39-211ENST00000557658 SLC25A15Q9Y619 301 aa9.61□□□□□ -0.87
VIPAS39-211ENST00000557658 C19orf67A6NJJ6 358 aa9.61□□□□□ -0.87
VIPAS39-211ENST00000557658 HINT1P49773 126 aaPredicted RBP9.61□□□□□ -0.87
VIPAS39-211ENST00000557658 ERHP84090 104 aaKnown RBP9.61□□□□□ -0.87
VIPAS39-211ENST00000557658 SLC25A48Q6ZT89 311 aaKnown RBP9.61□□□□□ -0.87
VIPAS39-211ENST00000557658 ZNF329Q86UD4 541 aa9.61□□□□□ -0.87
VIPAS39-211ENST00000557658 OR8B3Q8NGG8 313 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms