RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 TRAV17A0A0B4J275 112 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 PRSS37A4D1T9 235 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 IFITM5A6NNB3 132 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 F5H768 121 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 MFNGO00587 321 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 FGF16O43320 207 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 CD5LO43866 347 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 HIST1H2BKO60814 126 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 SS18L1O75177 396 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-212ENST00000557477 FARS2O95363 451 aaKnown RBP2.98□□□□□ -1.93
PRPF39-212ENST00000557477 CD74P04233 296 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 HLA-DQB2P05538 268 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 HIST1H2BJP06899 126 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 CD14P08571 375 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 CELP19835 753 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 CXCL3P19876 107 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 HIST1H2BOP23527 126 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 MIPP30301 263 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 HIST1H2BBP33778 126 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 CXCL5P42830 114 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 CA7P43166 264 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 TCTAP57738 103 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 HIST1H2BDP58876 126 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 HIST1H2BCP62807 126 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 SELENOWP63302 87 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 PAFAH1B2P68402 229 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 PLCXD2Q0VAA5 305 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 SMAGPQ0VAQ4 97 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 GABRA6Q16445 453 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 HIST2H2BEQ16778 126 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 TMEM183BQ1AE95 376 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 KRTAP21-3Q3LHN1 58 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 COA6Q5JTJ3 125 aaKnown RBP2.98□□□□□ -1.93
PRPF39-212ENST00000557477 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-212ENST00000557477 CPTPQ5TA50 214 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 OR2T2Q6IF00 324 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 LAIR2Q6ISS4 152 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 EPGNQ6UW88 154 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 IGFL3Q6UXB1 125 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 Q6ZS92 163 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 FA2HQ7L5A8 372 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 OR8I2Q8N0Y5 310 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 TCTEX1D1Q8N7M0 179 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 CHST4Q8NCG5 386 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 OR4D11Q8NGI4 311 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 OR4A4PQ8NGN8 299 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 OR2Y1Q8NGV0 311 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 OR13G1Q8NGZ3 307 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 OR5B3Q8NH48 314 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 GPR119Q8TDV5 335 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 HIST1H2BHQ93079 126 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 WDR34Q96EX3 536 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 HIST1H2BNQ99877 126 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 HIST1H2BMQ99879 126 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 PATZ1Q9HBE1 687 aaKnown RBP2.98□□□□□ -1.93
PRPF39-212ENST00000557477 TAF9BQ9HBM6 251 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 MRPL16Q9NX20 251 aaKnown RBP2.98□□□□□ -1.93
PRPF39-212ENST00000557477 BET1LQ9NYM9 111 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 SLC23A2Q9UGH3 650 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 VAX2Q9UIW0 290 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 HSPB8Q9UJY1 196 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 ERG28Q9UKR5 140 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 TRAPPC2LQ9UL33 140 aa2.98□□□□□ -1.93
PRPF39-212ENST00000557477 RP1L1Q8IWN7 2480 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-212ENST00000557477 CSMD1Q96PZ7 3565 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 F8P00451 2351 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 A0A0B4J2A0 478 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 LOC100130705A0A1B0GUX0 176 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 A0A1B0GX78 115 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 KANTRA0A1W2PQU2 76 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 A0A1W2PRS3 328 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 PLAC8L1A1L4L8 177 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 C7orf77A4D0Y5 90 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 TMEM235A6NFC5 223 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 C19orf84I3L1E1 186 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 TNFRSF11BO00300 401 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 XKRYO14609 159 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 EIF4E2O60573 245 aaKnown RBP2.97□□□□□ -1.93
PRPF39-212ENST00000557477 FOXH1O75593 365 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 BGLAPP02818 100 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 TYMSP04818 313 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 ISG15P05161 165 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 OR4A8P0C604 315 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 SFTA3P0C7M3 94 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 SLC35G6P0C7Q6 338 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 OR12D1P0DN82 309 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 AGTR1P30556 359 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 SNCAP37840 140 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 DNASE1L1P49184 302 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 SULT1A1P50225 295 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 SSR4P51571 173 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 POLR2HP52434 150 aaKnown RBP2.97□□□□□ -1.93
PRPF39-212ENST00000557477 KRTAP12-2P59991 146 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 DYNLT1P63172 113 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 CRADDP78560 199 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 H3F3AP84243 136 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 RUNX1Q01196 453 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 ZNF266Q14584 549 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 TTLL9Q3SXZ7 439 aa2.97□□□□□ -1.93
PRPF39-212ENST00000557477 SOHLH1Q5JUK2 328 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms