RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 YIF1AO95070 293 aa12.43□□□□□ -0.42
VSX1-207ENST00000557285 P0C879 139 aa12.43□□□□□ -0.42
VSX1-207ENST00000557285 UCP1P25874 307 aa12.43□□□□□ -0.42
VSX1-207ENST00000557285 ADMP35318 185 aa12.43□□□□□ -0.42
VSX1-207ENST00000557285 SNCAP37840 140 aa12.43□□□□□ -0.42
VSX1-207ENST00000557285 SLC16A13Q7RTY0 426 aa12.43□□□□□ -0.42
VSX1-207ENST00000557285 MARC2Q969Z3 335 aa12.43□□□□□ -0.42
VSX1-207ENST00000557285 PRRT1Q99946 306 aa12.43□□□□□ -0.42
VSX1-207ENST00000557285 SPATA25Q9BR10 227 aa12.43□□□□□ -0.42
VSX1-207ENST00000557285 C5orf66Q9H5L9 145 aa12.43□□□□□ -0.42
VSX1-207ENST00000557285 ENY2Q9NPA8 101 aa12.43□□□□□ -0.42
VSX1-207ENST00000557285 DAZ1Q9NQZ3 744 aaKnown RBP12.43□□□□□ -0.42
VSX1-207ENST00000557285 PRR13Q9NZ81 148 aa12.43□□□□□ -0.42
VSX1-207ENST00000557285 MRPL27Q9P0M9 148 aaKnown RBP12.43□□□□□ -0.42
VSX1-207ENST00000557285 IGHV3-49A0A0A0MS15 119 aa12.42□□□□□ -0.42
VSX1-207ENST00000557285 ANKRD20A5PA0PJZ0 165 aa12.42□□□□□ -0.42
VSX1-207ENST00000557285 RBMY1BA6NDE4 496 aaKnown RBP12.42□□□□□ -0.42
VSX1-207ENST00000557285 RBMY1EA6NEQ0 496 aaKnown RBP12.42□□□□□ -0.42
VSX1-207ENST00000557285 I3L2K1 104 aa12.42□□□□□ -0.42
VSX1-207ENST00000557285 NDUFA4O00483 81 aa12.42□□□□□ -0.42
VSX1-207ENST00000557285 NUPL2O15504 423 aaKnown RBP12.42□□□□□ -0.42
VSX1-207ENST00000557285 GSTZ1O43708 216 aaPredicted RBP12.42□□□□□ -0.42
VSX1-207ENST00000557285 RBMY1DP0C7P1 496 aaKnown RBP12.42□□□□□ -0.42
VSX1-207ENST00000557285 MFAP4P55083 255 aa12.42□□□□□ -0.42
VSX1-207ENST00000557285 ZNF114Q8NC26 417 aa12.42□□□□□ -0.42
VSX1-207ENST00000557285 LHFPL5Q8TAF8 219 aa12.42□□□□□ -0.42
VSX1-207ENST00000557285 FAM110AQ9BQ89 295 aa12.42□□□□□ -0.42
VSX1-207ENST00000557285 TMEM222Q9H0R3 208 aa12.42□□□□□ -0.42
VSX1-207ENST00000557285 RABL2AQ9UBK7 228 aaPredicted RBP12.42□□□□□ -0.42
VSX1-207ENST00000557285 RABL2BQ9UNT1 228 aa12.42□□□□□ -0.42
VSX1-207ENST00000557285 GNG7O60262 68 aa12.41□□□□□ -0.42
VSX1-207ENST00000557285 NXPH3O95157 252 aa12.41□□□□□ -0.42
VSX1-207ENST00000557285 CTSGP08311 255 aa12.41□□□□□ -0.42
VSX1-207ENST00000557285 C8orf88P0DMB2 117 aa12.41□□□□□ -0.42
VSX1-207ENST00000557285 ELLP55199 621 aaPredicted RBP12.41□□□□□ -0.42
VSX1-207ENST00000557285 PYDC2Q56P42 97 aa12.41□□□□□ -0.42
VSX1-207ENST00000557285 TMEM268Q5VZI3 342 aa12.41□□□□□ -0.42
VSX1-207ENST00000557285 NBEAL2Q6ZNJ1 2754 aa12.41□□□□□ -0.42
VSX1-207ENST00000557285 Q6ZRM9 215 aa12.41□□□□□ -0.42
VSX1-207ENST00000557285 MUC7Q8TAX7 377 aa12.41□□□□□ -0.42
VSX1-207ENST00000557285 DNAH7Q8WXX0 4024 aa12.4□□□□□ -0.42
VSX1-207ENST00000557285 CRYM-AS1A6NIL9 109 aa12.4□□□□□ -0.42
VSX1-207ENST00000557285 RELQ04864 619 aaPredicted RBP12.4□□□□□ -0.42
VSX1-207ENST00000557285 SURF2Q15527 256 aaPredicted RBP12.4□□□□□ -0.42
VSX1-207ENST00000557285 SELENOHQ8IZQ5 122 aaKnown RBP12.4□□□□□ -0.42
VSX1-207ENST00000557285 GLYATL2Q8WU03 294 aa12.4□□□□□ -0.42
VSX1-207ENST00000557285 RBPMSQ93062 196 aaKnown RBP12.4□□□□□ -0.42
VSX1-207ENST00000557285 NXF2Q9GZY0 626 aaKnown RBP12.4□□□□□ -0.42
VSX1-207ENST00000557285 GAR1Q9NY12 217 aaKnown RBP12.4□□□□□ -0.42
VSX1-207ENST00000557285 CACNG5Q9UF02 275 aa12.4□□□□□ -0.42
VSX1-207ENST00000557285 UBQLN2Q9UHD9 624 aa12.4□□□□□ -0.42
VSX1-207ENST00000557285 SCP2D1Q9UJQ7 156 aa12.4□□□□□ -0.42
VSX1-207ENST00000557285 GPR132Q9UNW8 380 aa12.4□□□□□ -0.42
VSX1-207ENST00000557285 C3orf84H3BNL1 204 aa12.39□□□□□ -0.43
VSX1-207ENST00000557285 B3GALNT1O75752 331 aa12.39□□□□□ -0.43
VSX1-207ENST00000557285 CDS2O95674 445 aa12.39□□□□□ -0.43
VSX1-207ENST00000557285 AKR1C4P17516 323 aa12.39□□□□□ -0.43
VSX1-207ENST00000557285 DHODHQ02127 395 aa12.39□□□□□ -0.43
VSX1-207ENST00000557285 ANKRD55Q3KP44 614 aa12.39□□□□□ -0.43
VSX1-207ENST00000557285 ZFAND6Q6FIF0 208 aa12.39□□□□□ -0.43
VSX1-207ENST00000557285 ATP6V0BQ99437 205 aa12.39□□□□□ -0.43
VSX1-207ENST00000557285 SOSTQ9BQB4 213 aa12.39□□□□□ -0.43
VSX1-207ENST00000557285 IGKV3-7A0A075B6H7 116 aa12.38□□□□□ -0.43
VSX1-207ENST00000557285 IGHV3OR16-13A0A075B7E8 117 aa12.38□□□□□ -0.43
VSX1-207ENST00000557285 IGHV3-74A0A0B4J1X5 117 aa12.38□□□□□ -0.43
VSX1-207ENST00000557285 RNASE2P10153 161 aaKnown RBP12.38□□□□□ -0.43
VSX1-207ENST00000557285 S100A5P33763 92 aa12.38□□□□□ -0.43
VSX1-207ENST00000557285 SUB1P53999 127 aaKnown RBP eCLIP12.38□□□□□ -0.43
VSX1-207ENST00000557285 DUSP18Q8NEJ0 188 aa12.38□□□□□ -0.43
VSX1-207ENST00000557285 GPR146Q96CH1 333 aa12.38□□□□□ -0.43
VSX1-207ENST00000557285 CITED4Q96RK1 184 aa12.38□□□□□ -0.43
VSX1-207ENST00000557285 TXN2Q99757 166 aa12.38□□□□□ -0.43
VSX1-207ENST00000557285 TRAV25A0A0B4J276 109 aa12.37□□□□□ -0.43
VSX1-207ENST00000557285 C15orf62A8K5M9 175 aa12.37□□□□□ -0.43
VSX1-207ENST00000557285 LYL1P12980 280 aa12.37□□□□□ -0.43
VSX1-207ENST00000557285 OPRK1P41145 380 aa12.37□□□□□ -0.43
VSX1-207ENST00000557285 NPBWR1P48145 328 aa12.37□□□□□ -0.43
VSX1-207ENST00000557285 TFPI2P48307 235 aa12.37□□□□□ -0.43
VSX1-207ENST00000557285 LAMTOR1Q6IAA8 161 aa12.37□□□□□ -0.43
VSX1-207ENST00000557285 LINC00322Q6ZN03 302 aaPredicted RBP12.37□□□□□ -0.43
VSX1-207ENST00000557285 FAM219AQ8IW50 185 aa12.37□□□□□ -0.43
VSX1-207ENST00000557285 TMEM230Q96A57 120 aa12.37□□□□□ -0.43
VSX1-207ENST00000557285 ZNF414Q96IQ9 312 aa12.37□□□□□ -0.43
VSX1-207ENST00000557285 HIPK2Q9H2X6 1198 aa12.37□□□□□ -0.43
VSX1-207ENST00000557285 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.37□□□□□ -0.43
VSX1-207ENST00000557285 IGHV7-4-1A0A0J9YVY3 117 aa12.36□□□□□ -0.43
VSX1-207ENST00000557285 CEBPZOSA8MTT3 80 aa12.36□□□□□ -0.43
VSX1-207ENST00000557285 K7EMT4 169 aa12.36□□□□□ -0.43
VSX1-207ENST00000557285 SPCS3P61009 180 aa12.36□□□□□ -0.43
VSX1-207ENST00000557285 MLANAQ16655 118 aa12.36□□□□□ -0.43
VSX1-207ENST00000557285 TMED4Q7Z7H5 227 aa12.36□□□□□ -0.43
VSX1-207ENST00000557285 TMEM116Q8NCL8 245 aa12.36□□□□□ -0.43
VSX1-207ENST00000557285 SCGB3A2Q96PL1 93 aa12.36□□□□□ -0.43
VSX1-207ENST00000557285 RNF2Q99496 336 aa12.36□□□□□ -0.43
VSX1-207ENST00000557285 SPAG8Q99932 426 aaPredicted RBP12.36□□□□□ -0.43
VSX1-207ENST00000557285 RHPN1-AS1Q9BWJ2 59 aa12.36□□□□□ -0.43
VSX1-207ENST00000557285 HEYLQ9NQ87 328 aaPredicted RBP12.36□□□□□ -0.43
VSX1-207ENST00000557285 SMPXQ9UHP9 88 aa12.36□□□□□ -0.43
VSX1-207ENST00000557285 KCNIP3Q9Y2W7 256 aa12.36□□□□□ -0.43
VSX1-207ENST00000557285 V9GYH0 126 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms