RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 ZFP36L2P47974 494 aaKnown RBP7.53□□□□□ -1.2
SYNE3-205ENST00000557275 LHX2P50458 406 aa7.53□□□□□ -1.2
SYNE3-205ENST00000557275 INSL4Q14641 139 aa7.53□□□□□ -1.2
SYNE3-205ENST00000557275 HCP5Q6MZN7 132 aa7.53□□□□□ -1.2
SYNE3-205ENST00000557275 THSD4Q6ZMP0 1018 aa7.53□□□□□ -1.2
SYNE3-205ENST00000557275 UBE2WQ96B02 151 aa7.53□□□□□ -1.2
SYNE3-205ENST00000557275 LHX9Q9NQ69 397 aa7.53□□□□□ -1.2
SYNE3-205ENST00000557275 SIPA1L3O60292 1781 aaPredicted RBP7.53□□□□□ -1.2
SYNE3-205ENST00000557275 MYMXA0A1B0GTQ4 84 aa7.53□□□□□ -1.2
SYNE3-205ENST00000557275 CCL20P78556 96 aa7.53□□□□□ -1.2
SYNE3-205ENST00000557275 GP6Q9HCN6 339 aa7.53□□□□□ -1.2
SYNE3-205ENST00000557275 PRR33A8MZF0 331 aa7.53□□□□□ -1.2
SYNE3-205ENST00000557275 IL18BPO95998 194 aa7.53□□□□□ -1.2
SYNE3-205ENST00000557275 SELLP14151 372 aa7.53□□□□□ -1.2
SYNE3-205ENST00000557275 C1orf100Q5SVJ3 147 aa7.53□□□□□ -1.2
SYNE3-205ENST00000557275 ANKHD1Q8IWZ3 2542 aaKnown RBP7.53□□□□□ -1.2
SYNE3-205ENST00000557275 ZNF385AQ96PM9 386 aaKnown RBP7.53□□□□□ -1.2
SYNE3-205ENST00000557275 EML5Q05BV3 1969 aa7.53□□□□□ -1.2
SYNE3-205ENST00000557275 TRPM3Q9HCF6 1732 aaPredicted RBP7.53□□□□□ -1.2
SYNE3-205ENST00000557275 ARRDC1-AS1Q9H2J1 176 aa7.53□□□□□ -1.2
SYNE3-205ENST00000557275 SIGLEC1Q9BZZ2 1709 aa7.53□□□□□ -1.2
SYNE3-205ENST00000557275 A0A1W2PPC1 479 aa7.53□□□□□ -1.2
SYNE3-205ENST00000557275 C9JCJ5 164 aa7.53□□□□□ -1.2
SYNE3-205ENST00000557275 TNFSF13O75888 250 aa7.53□□□□□ -1.2
SYNE3-205ENST00000557275 LRRK2Q5S007 2527 aa7.53□□□□□ -1.2
SYNE3-205ENST00000557275 FUT5Q11128 374 aa7.53□□□□□ -1.2
SYNE3-205ENST00000557275 MAJINQ3KP22 176 aa7.53□□□□□ -1.2
SYNE3-205ENST00000557275 TEX45Q8NA69 505 aa7.53□□□□□ -1.2
SYNE3-205ENST00000557275 HILPDAQ9Y5L2 63 aa7.52□□□□□ -1.2
SYNE3-205ENST00000557275 ADARB2-AS1A8MUL3 147 aa7.52□□□□□ -1.21
SYNE3-205ENST00000557275 COX6B1P14854 86 aa7.52□□□□□ -1.21
SYNE3-205ENST00000557275 ICAM4Q14773 271 aa7.52□□□□□ -1.21
SYNE3-205ENST00000557275 PDCD1Q15116 288 aa7.52□□□□□ -1.21
SYNE3-205ENST00000557275 RASL10AQ92737 203 aa7.52□□□□□ -1.21
SYNE3-205ENST00000557275 PPP1R3EQ9H7J1 279 aa7.52□□□□□ -1.21
SYNE3-205ENST00000557275 COL9A1P20849 921 aa7.52□□□□□ -1.21
SYNE3-205ENST00000557275 UBE2V1Q13404 147 aa7.52□□□□□ -1.21
SYNE3-205ENST00000557275 RFLNAQ6ZTI6 216 aa7.52□□□□□ -1.21
SYNE3-205ENST00000557275 IFI27L1Q96BM0 104 aa7.52□□□□□ -1.21
SYNE3-205ENST00000557275 CCL2P13500 99 aa7.52□□□□□ -1.21
SYNE3-205ENST00000557275 TFPI2P48307 235 aa7.52□□□□□ -1.21
SYNE3-205ENST00000557275 ZNF721Q8TF20 911 aa7.52□□□□□ -1.21
SYNE3-205ENST00000557275 PAX4O43316 350 aa7.52□□□□□ -1.21
SYNE3-205ENST00000557275 C5orf66Q9H5L9 145 aa7.52□□□□□ -1.21
SYNE3-205ENST00000557275 SERF1AO75920 110 aa7.52□□□□□ -1.21
SYNE3-205ENST00000557275 HMGA1P17096 107 aaKnown RBP7.52□□□□□ -1.21
SYNE3-205ENST00000557275 ASPHD2Q6ICH7 369 aa7.52□□□□□ -1.21
SYNE3-205ENST00000557275 TEX43Q6ZNM6 134 aa7.52□□□□□ -1.21
SYNE3-205ENST00000557275 FOXA3P55318 350 aaPredicted RBP7.52□□□□□ -1.21
SYNE3-205ENST00000557275 CENPVQ7Z7K6 275 aaPredicted RBP7.52□□□□□ -1.21
SYNE3-205ENST00000557275 PRR32B1ATL7 298 aa7.52□□□□□ -1.21
SYNE3-205ENST00000557275 FAM90A2PQ658T7 463 aa7.52□□□□□ -1.21
SYNE3-205ENST00000557275 TRBV5-5A0A0J9YX44 114 aa7.52□□□□□ -1.21
SYNE3-205ENST00000557275 B9A039 149 aa7.52□□□□□ -1.21
SYNE3-205ENST00000557275 NRN1LQ496H8 165 aa7.52□□□□□ -1.21
SYNE3-205ENST00000557275 SFTA2Q6UW10 78 aa7.52□□□□□ -1.21
SYNE3-205ENST00000557275 DSCR8Q96T75 97 aa7.52□□□□□ -1.21
SYNE3-205ENST00000557275 C1QTNF4Q9BXJ3 329 aa7.52□□□□□ -1.21
SYNE3-205ENST00000557275 A0A1W2PRE2 83 aa7.51□□□□□ -1.21
SYNE3-205ENST00000557275 FAM214BQ7L5A3 538 aa7.51□□□□□ -1.21
SYNE3-205ENST00000557275 PRRT4C9JH25 899 aa7.51□□□□□ -1.21
SYNE3-205ENST00000557275 DUSP15Q9H1R2 295 aaPredicted RBP7.51□□□□□ -1.21
SYNE3-205ENST00000557275 LINC00158P58513 81 aa7.51□□□□□ -1.21
SYNE3-205ENST00000557275 DMRTC1Q5HYR2 192 aa7.51□□□□□ -1.21
SYNE3-205ENST00000557275 C21orf62Q9NYP8 219 aa7.51□□□□□ -1.21
SYNE3-205ENST00000557275 NOVP48745 357 aa7.51□□□□□ -1.21
SYNE3-205ENST00000557275 SNHG12Q9BXW3 62 aa7.51□□□□□ -1.21
SYNE3-205ENST00000557275 LTBP4Q8N2S1 1624 aa7.51□□□□□ -1.21
SYNE3-205ENST00000557275 LOC105371242A0A075B767 164 aa7.51□□□□□ -1.21
SYNE3-205ENST00000557275 REG1BP48304 166 aa7.51□□□□□ -1.21
SYNE3-205ENST00000557275 PPP1R27Q86WC6 154 aa7.51□□□□□ -1.21
SYNE3-205ENST00000557275 HIVEP2P31629 2446 aa7.51□□□□□ -1.21
SYNE3-205ENST00000557275 A0A087WX48 190 aa7.51□□□□□ -1.21
SYNE3-205ENST00000557275 IGHV1OR21-1A0A087WYE8 117 aa7.51□□□□□ -1.21
SYNE3-205ENST00000557275 GAGE2AQ6NT46 116 aa7.51□□□□□ -1.21
SYNE3-205ENST00000557275 LINC01587Q99440 93 aa7.51□□□□□ -1.21
SYNE3-205ENST00000557275 GMLQ99445 158 aa7.51□□□□□ -1.21
SYNE3-205ENST00000557275 BHLHA9Q7RTU4 235 aa7.51□□□□□ -1.21
SYNE3-205ENST00000557275 Q9H3A6 140 aa7.51□□□□□ -1.21
SYNE3-205ENST00000557275 PPIAL4CA0A0B4J2A2 164 aa7.5□□□□□ -1.21
SYNE3-205ENST00000557275 PPIAL4GP0DN37 164 aa7.5□□□□□ -1.21
SYNE3-205ENST00000557275 IFITM3Q01628 133 aa7.5□□□□□ -1.21
SYNE3-205ENST00000557275 RPUSD1Q9UJJ7 312 aaKnown RBP7.5□□□□□ -1.21
SYNE3-205ENST00000557275 TANC2Q9HCD6 1990 aa7.5□□□□□ -1.21
SYNE3-205ENST00000557275 CD7P09564 240 aa7.5□□□□□ -1.21
SYNE3-205ENST00000557275 ZNF703Q9H7S9 590 aaPredicted RBP7.5□□□□□ -1.21
SYNE3-205ENST00000557275 C1QL1O75973 258 aa7.5□□□□□ -1.21
SYNE3-205ENST00000557275 SMIM20Q8N5G0 67 aa7.5□□□□□ -1.21
SYNE3-205ENST00000557275 PATE1Q8WXA2 126 aa7.5□□□□□ -1.21
SYNE3-205ENST00000557275 FRMPD3Q5JV73 1810 aa7.5□□□□□ -1.21
SYNE3-205ENST00000557275 PDLIM4P50479 330 aa7.5□□□□□ -1.21
SYNE3-205ENST00000557275 DLEU1O43261 78 aa7.5□□□□□ -1.21
SYNE3-205ENST00000557275 IGHG4P01861 327 aa7.5□□□□□ -1.21
SYNE3-205ENST00000557275 PPDPFLQ8WWR9 84 aa7.5□□□□□ -1.21
SYNE3-205ENST00000557275 TNFRSF14Q92956 283 aa7.5□□□□□ -1.21
SYNE3-205ENST00000557275 MRPS18BQ9Y676 258 aaKnown RBP7.5□□□□□ -1.21
SYNE3-205ENST00000557275 TCF20Q9UGU0 1960 aaKnown RBP7.5□□□□□ -1.21
SYNE3-205ENST00000557275 ANKRD34AQ69YU3 496 aa7.5□□□□□ -1.21
SYNE3-205ENST00000557275 STHQ8IWL8 128 aa7.5□□□□□ -1.21
SYNE3-205ENST00000557275 DSCAMO60469 2012 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms