RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 IGHV7-4-1A0A0J9YVY3 117 aa6.35□□□□□ -1.39
VRK1-206ENST00000557222 MARCH11A6NNE9 402 aa6.35□□□□□ -1.39
VRK1-206ENST00000557222 K7EIM0 57 aa6.35□□□□□ -1.39
VRK1-206ENST00000557222 CHEK1O14757 476 aa6.35□□□□□ -1.39
VRK1-206ENST00000557222 NUPL2O15504 423 aaKnown RBP6.35□□□□□ -1.39
VRK1-206ENST00000557222 SNAPC5O75971 98 aa6.35□□□□□ -1.39
VRK1-206ENST00000557222 DFFBO76075 338 aa6.35□□□□□ -1.39
VRK1-206ENST00000557222 S1PR2O95136 353 aa6.35□□□□□ -1.39
VRK1-206ENST00000557222 RPA2P15927 270 aa6.35□□□□□ -1.39
VRK1-206ENST00000557222 GNRHRP30968 328 aa6.35□□□□□ -1.39
VRK1-206ENST00000557222 PAFAH1B2P68402 229 aa6.35□□□□□ -1.39
VRK1-206ENST00000557222 RBMS2Q15434 407 aaKnown RBP6.35□□□□□ -1.39
VRK1-206ENST00000557222 AADACL3Q5VUY0 350 aa6.35□□□□□ -1.39
VRK1-206ENST00000557222 ZNF818PQ6ZRF7 136 aa6.35□□□□□ -1.39
VRK1-206ENST00000557222 GVQW1Q8N7I0 195 aa6.35□□□□□ -1.39
VRK1-206ENST00000557222 TMEM116Q8NCL8 245 aa6.35□□□□□ -1.39
VRK1-206ENST00000557222 OR1P1Q8NH06 330 aa6.35□□□□□ -1.39
VRK1-206ENST00000557222 LGALS14Q8TCE9 139 aa6.35□□□□□ -1.39
VRK1-206ENST00000557222 C2CD4CQ8TF44 421 aa6.35□□□□□ -1.39
VRK1-206ENST00000557222 DGCR14Q96DF8 476 aaKnown RBP6.35□□□□□ -1.39
VRK1-206ENST00000557222 CMTM3Q96MX0 182 aa6.35□□□□□ -1.39
VRK1-206ENST00000557222 TSC22D3Q99576 134 aa6.35□□□□□ -1.39
VRK1-206ENST00000557222 C20orf24Q9BUV8 137 aa6.35□□□□□ -1.39
VRK1-206ENST00000557222 RHPN1-AS1Q9BWJ2 59 aa6.35□□□□□ -1.39
VRK1-206ENST00000557222 AUNIPQ9H7T9 357 aa6.35□□□□□ -1.39
VRK1-206ENST00000557222 DIABLOQ9NR28 239 aa6.35□□□□□ -1.39
VRK1-206ENST00000557222 PRNDQ9UKY0 176 aa6.35□□□□□ -1.39
VRK1-206ENST00000557222 SSR3Q9UNL2 185 aa6.35□□□□□ -1.39
VRK1-206ENST00000557222 RRP15Q9Y3B9 282 aaKnown RBP6.35□□□□□ -1.39
VRK1-206ENST00000557222 DYNC1H1Q14204 4646 aaKnown RBP6.34□□□□□ -1.39
VRK1-206ENST00000557222 TRAV14DV4A0A0A6YYC5 116 aa6.34□□□□□ -1.39
VRK1-206ENST00000557222 TRAV2A0A0B4J234 112 aa6.34□□□□□ -1.39
VRK1-206ENST00000557222 C11orf94C9JXX5 98 aa6.34□□□□□ -1.39
VRK1-206ENST00000557222 PGLYRP1O75594 196 aaPredicted RBP6.34□□□□□ -1.39
VRK1-206ENST00000557222 DEDDO75618 318 aa6.34□□□□□ -1.39
VRK1-206ENST00000557222 MFAP2P55001 183 aa6.34□□□□□ -1.39
VRK1-206ENST00000557222 MFAP4P55083 255 aa6.34□□□□□ -1.39
VRK1-206ENST00000557222 FXYD4P59646 89 aa6.34□□□□□ -1.39
VRK1-206ENST00000557222 HERV-K104P61576 105 aa6.34□□□□□ -1.39
VRK1-206ENST00000557222 Q56UQ5 140 aa6.34□□□□□ -1.39
VRK1-206ENST00000557222 TMEM41BQ5BJD5 291 aa6.34□□□□□ -1.39
VRK1-206ENST00000557222 FAM90A2PQ658T7 463 aa6.34□□□□□ -1.39
VRK1-206ENST00000557222 CMTM1Q8IZ96 169 aa6.34□□□□□ -1.39
VRK1-206ENST00000557222 OR11H2Q8NH07 326 aa6.34□□□□□ -1.39
VRK1-206ENST00000557222 OR51H1Q8NH63 302 aa6.34□□□□□ -1.39
VRK1-206ENST00000557222 RNF2Q99496 336 aa6.34□□□□□ -1.39
VRK1-206ENST00000557222 HRH4Q9H3N8 390 aa6.34□□□□□ -1.39
VRK1-206ENST00000557222 OR51B2Q9Y5P1 312 aa6.34□□□□□ -1.39
VRK1-206ENST00000557222 DNAH11Q96DT5 4516 aa6.33□□□□□ -1.4
VRK1-206ENST00000557222 C15orf61A6NNL5 157 aa6.33□□□□□ -1.4
VRK1-206ENST00000557222 I3L2K1 104 aa6.33□□□□□ -1.4
VRK1-206ENST00000557222 PTHLHP12272 177 aa6.33□□□□□ -1.4
VRK1-206ENST00000557222 SDC2P34741 201 aa6.33□□□□□ -1.4
VRK1-206ENST00000557222 LPAR6P43657 344 aa6.33□□□□□ -1.4
VRK1-206ENST00000557222 APRG1Q8IVJ8 170 aa6.33□□□□□ -1.4
VRK1-206ENST00000557222 ZNF114Q8NC26 417 aa6.33□□□□□ -1.4
VRK1-206ENST00000557222 MOB3AQ96BX8 217 aa6.33□□□□□ -1.4
VRK1-206ENST00000557222 SLC25A38Q96DW6 304 aa6.33□□□□□ -1.4
VRK1-206ENST00000557222 CNBD2Q96M20 576 aa6.33□□□□□ -1.4
VRK1-206ENST00000557222 GINS3Q9BRX5 216 aa6.33□□□□□ -1.4
VRK1-206ENST00000557222 YTHDF1Q9BYJ9 559 aaKnown RBP6.33□□□□□ -1.4
VRK1-206ENST00000557222 NXF2Q9GZY0 626 aaKnown RBP6.33□□□□□ -1.4
VRK1-206ENST00000557222 TMEM14BQ9NUH8 114 aa6.33□□□□□ -1.4
VRK1-206ENST00000557222 RAB26Q9ULW5 256 aa6.33□□□□□ -1.4
VRK1-206ENST00000557222 SMIM30A4D0T7 59 aa6.32□□□□□ -1.4
VRK1-206ENST00000557222 GPR31O00270 319 aa6.32□□□□□ -1.4
VRK1-206ENST00000557222 XRCC3O43542 346 aa6.32□□□□□ -1.4
VRK1-206ENST00000557222 KRASP01116 189 aa6.32□□□□□ -1.4
VRK1-206ENST00000557222 EIF4EP06730 217 aaKnown RBP6.32□□□□□ -1.4
VRK1-206ENST00000557222 PSMB9P28065 219 aa6.32□□□□□ -1.4
VRK1-206ENST00000557222 S100GP29377 79 aa6.32□□□□□ -1.4
VRK1-206ENST00000557222 TAS2R46P59540 309 aa6.32□□□□□ -1.4
VRK1-206ENST00000557222 NANOS2P60321 138 aaKnown RBP6.32□□□□□ -1.4
VRK1-206ENST00000557222 TMEM187Q14656 261 aa6.32□□□□□ -1.4
VRK1-206ENST00000557222 IGFL4Q6B9Z1 124 aa6.32□□□□□ -1.4
VRK1-206ENST00000557222 LPCAT3Q6P1A2 487 aa6.32□□□□□ -1.4
VRK1-206ENST00000557222 LINC00336Q6ZUF6 198 aa6.32□□□□□ -1.4
VRK1-206ENST00000557222 TMEM17Q86X19 198 aa6.32□□□□□ -1.4
VRK1-206ENST00000557222 CROCCP3Q8IVE0 287 aa6.32□□□□□ -1.4
VRK1-206ENST00000557222 SPARTQ8N0X7 666 aa6.32□□□□□ -1.4
VRK1-206ENST00000557222 UBAC2Q8NBM4 344 aa6.32□□□□□ -1.4
VRK1-206ENST00000557222 DUSP18Q8NEJ0 188 aa6.32□□□□□ -1.4
VRK1-206ENST00000557222 TSPAN14Q8NG11 270 aa6.32□□□□□ -1.4
VRK1-206ENST00000557222 OR5H6Q8NGV6 325 aa6.32□□□□□ -1.4
VRK1-206ENST00000557222 FCAMRQ8WWV6 532 aa6.32□□□□□ -1.4
VRK1-206ENST00000557222 ZNF414Q96IQ9 312 aa6.32□□□□□ -1.4
VRK1-206ENST00000557222 C16orf92Q96LL3 132 aa6.32□□□□□ -1.4
VRK1-206ENST00000557222 HINT2Q9BX68 163 aa6.32□□□□□ -1.4
VRK1-206ENST00000557222 VSIRQ9H7M9 311 aa6.32□□□□□ -1.4
VRK1-206ENST00000557222 EHFQ9NZC4 300 aa6.32□□□□□ -1.4
VRK1-206ENST00000557222 ANAPC10Q9UM13 185 aa6.32□□□□□ -1.4
VRK1-206ENST00000557222 IGHV3-21A0A0B4J1V1 117 aa6.31□□□□□ -1.4
VRK1-206ENST00000557222 ZNF207O43670 478 aaKnown RBP6.31□□□□□ -1.4
VRK1-206ENST00000557222 YIF1AO95070 293 aa6.31□□□□□ -1.4
VRK1-206ENST00000557222 CA1P00915 261 aaPredicted RBP6.31□□□□□ -1.4
VRK1-206ENST00000557222 RLN1P04808 185 aa6.31□□□□□ -1.4
VRK1-206ENST00000557222 G6PCP35575 357 aa6.31□□□□□ -1.4
VRK1-206ENST00000557222 NPBWR1P48145 328 aa6.31□□□□□ -1.4
VRK1-206ENST00000557222 IDNKQ5T6J7 187 aa6.31□□□□□ -1.4
VRK1-206ENST00000557222 IZUMO2Q6UXV1 221 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms