RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 PTHLHP12272 177 aa9.29□□□□□ -0.92
SHMT2-223ENST00000556689 ADMP35318 185 aa9.29□□□□□ -0.92
SHMT2-223ENST00000556689 STEAP1BQ6NZ63 245 aa9.29□□□□□ -0.92
SHMT2-223ENST00000556689 SPAG16Q8N0X2 631 aa9.29□□□□□ -0.92
SHMT2-223ENST00000556689 OR5AP2Q8NGF4 316 aa9.29□□□□□ -0.92
SHMT2-223ENST00000556689 TRIM63Q969Q1 353 aa9.29□□□□□ -0.92
SHMT2-223ENST00000556689 PRRT1Q99946 306 aa9.29□□□□□ -0.92
SHMT2-223ENST00000556689 C11orf68Q9H3H3 251 aaKnown RBP9.29□□□□□ -0.92
SHMT2-223ENST00000556689 EHFQ9NZC4 300 aa9.29□□□□□ -0.92
SHMT2-223ENST00000556689 KLK11Q9UBX7 282 aa9.29□□□□□ -0.92
SHMT2-223ENST00000556689 SCP2D1Q9UJQ7 156 aa9.29□□□□□ -0.92
SHMT2-223ENST00000556689 IGHV3OR16-8A0A075B7F1 116 aa9.28□□□□□ -0.92
SHMT2-223ENST00000556689 TRAV3A0A0B4J244 114 aa9.28□□□□□ -0.92
SHMT2-223ENST00000556689 ANKRD20A5PA0PJZ0 165 aa9.28□□□□□ -0.92
SHMT2-223ENST00000556689 C15orf62A8K5M9 175 aa9.28□□□□□ -0.92
SHMT2-223ENST00000556689 IGLL5B9A064 214 aa9.28□□□□□ -0.92
SHMT2-223ENST00000556689 UPK2O00526 184 aa9.28□□□□□ -0.92
SHMT2-223ENST00000556689 TNFSF12O43508 249 aa9.28□□□□□ -0.92
SHMT2-223ENST00000556689 SERPINE2P07093 398 aa9.28□□□□□ -0.92
SHMT2-223ENST00000556689 HLA-DMAP28067 261 aa9.28□□□□□ -0.92
SHMT2-223ENST00000556689 S100GP29377 79 aa9.28□□□□□ -0.92
SHMT2-223ENST00000556689 HRH1P35367 487 aa9.28□□□□□ -0.92
SHMT2-223ENST00000556689 TAS2R31P59538 309 aa9.28□□□□□ -0.92
SHMT2-223ENST00000556689 HERV-K104P61576 105 aa9.28□□□□□ -0.92
SHMT2-223ENST00000556689 ZNF124Q15973 351 aa9.28□□□□□ -0.92
SHMT2-223ENST00000556689 LINC00336Q6ZUF6 198 aa9.28□□□□□ -0.92
SHMT2-223ENST00000556689 ARRDC1Q8N5I2 433 aa9.28□□□□□ -0.92
SHMT2-223ENST00000556689 OR10W1Q8NGF6 305 aa9.28□□□□□ -0.92
SHMT2-223ENST00000556689 ENKURQ8TC29 256 aa9.28□□□□□ -0.92
SHMT2-223ENST00000556689 CHRDL1Q9BU40 450 aa9.28□□□□□ -0.92
SHMT2-223ENST00000556689 QTRT1Q9BXR0 403 aaKnown RBP9.28□□□□□ -0.92
SHMT2-223ENST00000556689 C21orf62Q9NYP8 219 aa9.28□□□□□ -0.92
SHMT2-223ENST00000556689 SMPXQ9UHP9 88 aa9.28□□□□□ -0.92
SHMT2-223ENST00000556689 ANAPC10Q9UM13 185 aa9.28□□□□□ -0.92
SHMT2-223ENST00000556689 DNAH6Q9C0G6 4158 aa9.27□□□□□ -0.93
SHMT2-223ENST00000556689 LINC00854A0A1B0GVQ3 168 aa9.27□□□□□ -0.93
SHMT2-223ENST00000556689 RBFOX2O43251 390 aaKnown RBP eCLIP9.27□□□□□ -0.935e-15■■■■■ 33.3
SHMT2-223ENST00000556689 HPRT1P00492 218 aa9.27□□□□□ -0.93
SHMT2-223ENST00000556689 FCER2P06734 321 aa9.27□□□□□ -0.93
SHMT2-223ENST00000556689 FGF2P09038 288 aa9.27□□□□□ -0.93
SHMT2-223ENST00000556689 TRAPPC2P0DI81 140 aa9.27□□□□□ -0.93
SHMT2-223ENST00000556689 TRAPPC2BP0DI82 140 aa9.27□□□□□ -0.93
SHMT2-223ENST00000556689 OR13C7P0DN81 318 aa9.27□□□□□ -0.93
SHMT2-223ENST00000556689 NQO2P16083 231 aa9.27□□□□□ -0.93
SHMT2-223ENST00000556689 MFAP2P55001 183 aa9.27□□□□□ -0.93
SHMT2-223ENST00000556689 MSMO1Q15800 293 aa9.27□□□□□ -0.93
SHMT2-223ENST00000556689 POU2AF1Q16633 256 aa9.27□□□□□ -0.93
SHMT2-223ENST00000556689 THOC7Q6I9Y2 204 aaKnown RBP9.27□□□□□ -0.93
SHMT2-223ENST00000556689 GVQW1Q8N7I0 195 aa9.27□□□□□ -0.93
SHMT2-223ENST00000556689 ZBTB34Q8NCN2 500 aa9.27□□□□□ -0.93
SHMT2-223ENST00000556689 SECTM1Q8WVN6 248 aa9.27□□□□□ -0.93
SHMT2-223ENST00000556689 ATP6V0BQ99437 205 aa9.27□□□□□ -0.93
SHMT2-223ENST00000556689 RNF2Q99496 336 aa9.27□□□□□ -0.93
SHMT2-223ENST00000556689 CCL28Q9NRJ3 127 aa9.27□□□□□ -0.93
SHMT2-223ENST00000556689 COPZ2Q9P299 210 aa9.27□□□□□ -0.93
SHMT2-223ENST00000556689 APLNQ9ULZ1 77 aa9.27□□□□□ -0.93
SHMT2-223ENST00000556689 IGHV3-21A0A0B4J1V1 117 aa9.26□□□□□ -0.93
SHMT2-223ENST00000556689 C11orf94C9JXX5 98 aa9.26□□□□□ -0.93
SHMT2-223ENST00000556689 CHEK1O14757 476 aa9.26□□□□□ -0.93
SHMT2-223ENST00000556689 DEFB4AO15263 64 aa9.26□□□□□ -0.93
SHMT2-223ENST00000556689 LYRM1O43325 122 aa9.26□□□□□ -0.93
SHMT2-223ENST00000556689 PMP2P02689 132 aa9.26□□□□□ -0.93
SHMT2-223ENST00000556689 CD3DP04234 171 aa9.26□□□□□ -0.93
SHMT2-223ENST00000556689 NAT1P18440 290 aa9.26□□□□□ -0.93
SHMT2-223ENST00000556689 TFPI2P48307 235 aa9.26□□□□□ -0.93
SHMT2-223ENST00000556689 BAK1Q16611 211 aa9.26□□□□□ -0.93
SHMT2-223ENST00000556689 RGS21Q2M5E4 152 aa9.26□□□□□ -0.93
SHMT2-223ENST00000556689 SCGB2B2Q4G0G5 96 aa9.26□□□□□ -0.93
SHMT2-223ENST00000556689 HSD17B13Q7Z5P4 300 aaPredicted RBP9.26□□□□□ -0.93
SHMT2-223ENST00000556689 UBAC2Q8NBM4 344 aa9.26□□□□□ -0.93
SHMT2-223ENST00000556689 DMBX1Q8NFW5 382 aa9.26□□□□□ -0.93
SHMT2-223ENST00000556689 OR4C16Q8NGL9 310 aa9.26□□□□□ -0.93
SHMT2-223ENST00000556689 OR6F1Q8NGZ6 308 aa9.26□□□□□ -0.93
SHMT2-223ENST00000556689 SCARB1Q8WTV0 552 aa9.26□□□□□ -0.93
SHMT2-223ENST00000556689 SCGB3A2Q96PL1 93 aa9.26□□□□□ -0.93
SHMT2-223ENST00000556689 RHPN1-AS1Q9BWJ2 59 aa9.26□□□□□ -0.93
SHMT2-223ENST00000556689 IGKV3-7A0A075B6H7 116 aa9.25□□□□□ -0.93
SHMT2-223ENST00000556689 IGHV7-4-1A0A0J9YVY3 117 aa9.25□□□□□ -0.93
SHMT2-223ENST00000556689 TEX50A0A1B0GTY4 177 aa9.25□□□□□ -0.93
SHMT2-223ENST00000556689 M0QYG6 137 aa9.25□□□□□ -0.93
SHMT2-223ENST00000556689 PTTG1O95997 202 aa9.25□□□□□ -0.93
SHMT2-223ENST00000556689 CD74P04233 296 aa9.25□□□□□ -0.93
SHMT2-223ENST00000556689 MED14OSP0DP75 135 aa9.25□□□□□ -0.93
SHMT2-223ENST00000556689 FCGR2CP31995 323 aa9.25□□□□□ -0.93
SHMT2-223ENST00000556689 PAFAH1B2P68402 229 aa9.25□□□□□ -0.93
SHMT2-223ENST00000556689 WT1-ASQ06250 92 aa9.25□□□□□ -0.93
SHMT2-223ENST00000556689 CATR1Q13166 79 aa9.25□□□□□ -0.93
SHMT2-223ENST00000556689 ASAH1Q13510 395 aa9.25□□□□□ -0.93
SHMT2-223ENST00000556689 KLF9Q13886 244 aaPredicted RBP9.25□□□□□ -0.93
SHMT2-223ENST00000556689 TMEM187Q14656 261 aa9.25□□□□□ -0.93
SHMT2-223ENST00000556689 Q56UQ5 140 aa9.25□□□□□ -0.93
SHMT2-223ENST00000556689 LYSMD2Q8IV50 215 aa9.25□□□□□ -0.93
SHMT2-223ENST00000556689 TMEM116Q8NCL8 245 aa9.25□□□□□ -0.93
SHMT2-223ENST00000556689 OR1L8Q8NGR8 309 aa9.25□□□□□ -0.93
SHMT2-223ENST00000556689 PLEKHA2Q9HB19 425 aa9.25□□□□□ -0.93
SHMT2-223ENST00000556689 TMEM140Q9NV12 185 aa9.25□□□□□ -0.93
SHMT2-223ENST00000556689 F11RQ9Y624 299 aaKnown RBP9.25□□□□□ -0.93
SHMT2-223ENST00000556689 FAM240BA0A1B0GVZ2 78 aa9.24□□□□□ -0.93
SHMT2-223ENST00000556689 F8W735 103 aaPredicted RBP9.24□□□□□ -0.93
SHMT2-223ENST00000556689 YIF1AO95070 293 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms