RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 OR4A5Q8NH83 315 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 ABHD5Q8WTS1 349 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 SCGB3A2Q96PL1 93 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 CYTL1Q9NRR1 136 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 APC2O95996 2303 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 ATRXP46100 2492 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 TEX48A0A1B0GUV7 120 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 FAM90A10PA6NDY2 464 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 FAM90A20PA6NIJ5 464 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 FAM90A8PA6NJQ4 464 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 FAM90A7PA6NKC0 464 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 FAM90A22PA8MWA6 464 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 FAM90A12PA8MX19 464 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 FAM90A23PA8MXZ1 464 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 FAM90A13PP0C7W8 464 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 FAM90A24PP0C7X0 464 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 HLA-DRB5Q30154 266 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 HIST2H2BCQ6DN03 193 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 HIST2H2BDQ6DRA6 164 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 BTNL8Q6UX41 500 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 Q6ZS49 121 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 ACY3Q96HD9 319 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 RASL11BQ9BPW5 248 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 MRPL27Q9P0M9 148 aaKnown RBP4.23□□□□□ -1.73
TMEM260-210ENST00000556422 NAT8BQ9UHF3 227 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 PLCE1Q9P212 2302 aa4.23□□□□□ -1.73
TMEM260-210ENST00000556422 A0A087WX48 190 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 IGKV1-6A0A0C4DH72 117 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 C9JAW5 83 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 LYZL6O75951 148 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 APOA2P02652 100 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 IGLC1P0CG04 106 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 MDKP21741 143 aaPredicted RBP4.22□□□□□ -1.73
TMEM260-210ENST00000556422 FCGR2CP31995 323 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 KIR2DL2P43627 348 aaPredicted RBP4.22□□□□□ -1.73
TMEM260-210ENST00000556422 TPPP2P59282 170 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 FAM214BQ7L5A3 538 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 C9orf106Q8NAJ2 232 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 EDA2RQ9HAV5 297 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 KCNS2Q9ULS6 477 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 HIGD1AQ9Y241 93 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 SIGLEC9Q9Y336 463 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 USF3Q68DE3 2245 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 CACNA1DQ01668 2161 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 ISLRO14498 428 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 HSPB6O14558 160 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 CHST1O43916 411 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 PAGE4O60829 102 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 CXCL1P09341 107 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 CD33P20138 364 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 COX5AP20674 150 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 CA6P23280 308 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 FXYD4P59646 89 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 KRTDAPP60985 99 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 CYCSP99999 105 aaKnown RBP4.22□□□□□ -1.73
TMEM260-210ENST00000556422 FOXF2Q12947 444 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 TMEM187Q14656 261 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 SP6Q3SY56 376 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 Q6ZT83 130 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 DTX2Q86UW9 622 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 C11orf44Q8N8P7 122 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 C8orf46Q8TAG6 207 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 MRPL24Q96A35 216 aaKnown RBP4.22□□□□□ -1.73
TMEM260-210ENST00000556422 C2orf50Q96LR7 162 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 ZNF442Q9H7R0 627 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 ZNF286AQ9HBT8 521 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 A0A1W2PPI3 338 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 HRASP01112 189 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 KRASP01116 189 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 PPYP01298 95 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 SCTP09683 121 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 ATP6V0CP27449 155 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 C4orf26Q17RF5 130 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 MPV17LQ2QL34 196 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 TMEM78Q5T7P6 136 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 C8orf86Q6ZUL3 223 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 ZADH2Q8N4Q0 377 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 OR13A1Q8NGR1 328 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 OR2K2Q8NGT1 345 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 IL17DQ8TAD2 202 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 RTN4IP1Q8WWV3 396 aaPredicted RBP4.22□□□□□ -1.73
TMEM260-210ENST00000556422 RDH5Q92781 318 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 MUCL1Q96DR8 90 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 COQ2Q96H96 371 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 AQP10Q96PS8 301 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 NAA60Q9H7X0 242 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 ZMAT4Q9H898 229 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 MRPS16Q9Y3D3 137 aaKnown RBP4.22□□□□□ -1.73
TMEM260-210ENST00000556422 MPC1Q9Y5U8 109 aa4.22□□□□□ -1.73
TMEM260-210ENST00000556422 IGKV3-15P01624 115 aa4.21□□□□□ -1.73
TMEM260-210ENST00000556422 C1QTNF9P0C862 333 aa4.21□□□□□ -1.73
TMEM260-210ENST00000556422 ZNF728P0DKX0 622 aa4.21□□□□□ -1.73
TMEM260-210ENST00000556422 GLI4P10075 376 aa4.21□□□□□ -1.73
TMEM260-210ENST00000556422 PPIFP30405 207 aaKnown RBP4.21□□□□□ -1.73
TMEM260-210ENST00000556422 DLX6P56179 175 aa4.21□□□□□ -1.73
TMEM260-210ENST00000556422 FOXE3Q13461 319 aa4.21□□□□□ -1.73
TMEM260-210ENST00000556422 HES1Q14469 280 aa4.21□□□□□ -1.73
TMEM260-210ENST00000556422 PHLDA2Q53GA4 152 aa4.21□□□□□ -1.73
TMEM260-210ENST00000556422 PCSK4Q6UW60 755 aa4.21□□□□□ -1.73
TMEM260-210ENST00000556422 SEM1Q6ZVN7 128 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms