RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 LYZP61626 148 aa12.23□□□□□ -0.45
NEK9-209ENST00000556170 OR5AU1Q8NGC0 362 aa12.23□□□□□ -0.45
NEK9-209ENST00000556170 DLEU1O43261 78 aa12.23□□□□□ -0.45
NEK9-209ENST00000556170 Q6ZN92 141 aa12.23□□□□□ -0.45
NEK9-209ENST00000556170 ZNF439Q8NDP4 499 aa12.23□□□□□ -0.45
NEK9-209ENST00000556170 MOSP00540 346 aa12.22□□□□□ -0.45
NEK9-209ENST00000556170 CT45A6P0DMU7 189 aa12.22□□□□□ -0.45
NEK9-209ENST00000556170 CT45A5P0DMU8 189 aa12.22□□□□□ -0.45
NEK9-209ENST00000556170 CT45A7P0DMV0 189 aa12.22□□□□□ -0.45
NEK9-209ENST00000556170 ARF6P62330 175 aa12.22□□□□□ -0.45
NEK9-209ENST00000556170 KIAA1644Q3SXP7 199 aa12.22□□□□□ -0.45
NEK9-209ENST00000556170 Q5PR19 223 aa12.22□□□□□ -0.45
NEK9-209ENST00000556170 MUC3AQ02505 3323 aa12.22□□□□□ -0.45
NEK9-209ENST00000556170 A0A087WWC5 75 aa12.22□□□□□ -0.45
NEK9-209ENST00000556170 TRAV1-1A0A0B4J248 108 aa12.22□□□□□ -0.45
NEK9-209ENST00000556170 C15orf61A6NNL5 157 aa12.22□□□□□ -0.45
NEK9-209ENST00000556170 PMCHP20382 165 aa12.22□□□□□ -0.45
NEK9-209ENST00000556170 TIMP3P35625 211 aa12.22□□□□□ -0.45
NEK9-209ENST00000556170 RELBQ01201 579 aa12.22□□□□□ -0.45
NEK9-209ENST00000556170 SEM1Q6ZVN7 128 aa12.22□□□□□ -0.45
NEK9-209ENST00000556170 TMEM167BQ9NRX6 74 aa12.22□□□□□ -0.45
NEK9-209ENST00000556170 IGHV1-69-2A0A0G2JMI3 117 aa12.22□□□□□ -0.45
NEK9-209ENST00000556170 GFRA3O60609 400 aa12.22□□□□□ -0.45
NEK9-209ENST00000556170 GNB2P62879 340 aa12.22□□□□□ -0.45
NEK9-209ENST00000556170 OR1P1Q8NH06 330 aa12.22□□□□□ -0.45
NEK9-209ENST00000556170 VN1R17PQ8TDU5 208 aa12.22□□□□□ -0.45
NEK9-209ENST00000556170 GGTLC1Q9BX51 225 aa12.22□□□□□ -0.45
NEK9-209ENST00000556170 BOD1L1Q8NFC6 3051 aa12.22□□□□□ -0.45
NEK9-209ENST00000556170 SNURFLB1AK76 121 aa12.21□□□□□ -0.45
NEK9-209ENST00000556170 LY6HO94772 140 aa12.21□□□□□ -0.45
NEK9-209ENST00000556170 GCGP01275 180 aa12.21□□□□□ -0.45
NEK9-209ENST00000556170 IGLV1-44P01699 117 aa12.21□□□□□ -0.45
NEK9-209ENST00000556170 PRRX1P54821 245 aa12.21□□□□□ -0.45
NEK9-209ENST00000556170 ODF3L1Q8IXM7 274 aa12.21□□□□□ -0.45
NEK9-209ENST00000556170 OR8I2Q8N0Y5 310 aa12.21□□□□□ -0.45
NEK9-209ENST00000556170 C5orf30Q96GV9 206 aa12.21□□□□□ -0.45
NEK9-209ENST00000556170 A0A1W2PN81 502 aa12.21□□□□□ -0.45
NEK9-209ENST00000556170 H0Y8G0 127 aa12.21□□□□□ -0.45
NEK9-209ENST00000556170 C15orf65H3BRN8 121 aa12.21□□□□□ -0.45
NEK9-209ENST00000556170 CD24P25063 80 aa12.21□□□□□ -0.45
NEK9-209ENST00000556170 TFPI2P48307 235 aa12.21□□□□□ -0.45
NEK9-209ENST00000556170 MMDQ15546 238 aa12.21□□□□□ -0.45
NEK9-209ENST00000556170 C10orf113Q5VZT2 155 aa12.21□□□□□ -0.45
NEK9-209ENST00000556170 SPACA3Q8IXA5 215 aa12.21□□□□□ -0.45
NEK9-209ENST00000556170 IMMP2LQ96T52 175 aa12.21□□□□□ -0.45
NEK9-209ENST00000556170 TMEM208Q9BTX3 173 aa12.21□□□□□ -0.45
NEK9-209ENST00000556170 SIGLECL1Q8N7X8 197 aa12.21□□□□□ -0.46
NEK9-209ENST00000556170 OR4C13Q8NGP0 309 aa12.21□□□□□ -0.46
NEK9-209ENST00000556170 AGMATQ9BSE5 352 aa12.21□□□□□ -0.46
NEK9-209ENST00000556170 ZNF586Q9NXT0 402 aa12.21□□□□□ -0.46
NEK9-209ENST00000556170 RPUSD1Q9UJJ7 312 aaKnown RBP12.21□□□□□ -0.46
NEK9-209ENST00000556170 S4R3C0 116 aa12.21□□□□□ -0.46
NEK9-209ENST00000556170 FOXH1O75593 365 aa12.2□□□□□ -0.46
NEK9-209ENST00000556170 CBLN1P23435 193 aa12.2□□□□□ -0.46
NEK9-209ENST00000556170 NUBP1P53384 320 aa12.2□□□□□ -0.46
NEK9-209ENST00000556170 UTF1Q5T230 341 aa12.2□□□□□ -0.46
NEK9-209ENST00000556170 LYPD2Q6UXB3 125 aa12.2□□□□□ -0.46
NEK9-209ENST00000556170 TCF23Q7RTU1 214 aa12.2□□□□□ -0.46
NEK9-209ENST00000556170 OR5B3Q8NH48 314 aa12.2□□□□□ -0.46
NEK9-209ENST00000556170 MGST2Q99735 147 aa12.2□□□□□ -0.46
NEK9-209ENST00000556170 LPAR2Q9HBW0 351 aa12.2□□□□□ -0.46
NEK9-209ENST00000556170 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.2□□□□□ -0.46
NEK9-209ENST00000556170 A0A1B0GW64 132 aa12.2□□□□□ -0.46
NEK9-209ENST00000556170 CRISP2P16562 243 aa12.2□□□□□ -0.46
NEK9-209ENST00000556170 CCKARP32238 428 aa12.2□□□□□ -0.46
NEK9-209ENST00000556170 MUC15Q8N387 334 aa12.2□□□□□ -0.46
NEK9-209ENST00000556170 SSBP3Q9BWW4 388 aaPredicted RBP12.2□□□□□ -0.46
NEK9-209ENST00000556170 COL5A1P20908 1838 aaPredicted RBP12.2□□□□□ -0.46
NEK9-209ENST00000556170 EFNB3Q15768 340 aa12.2□□□□□ -0.46
NEK9-209ENST00000556170 UNQ6494/PRO21346Q6UXR6 183 aa12.2□□□□□ -0.46
NEK9-209ENST00000556170 HIST3H2BBQ8N257 126 aa12.2□□□□□ -0.46
NEK9-209ENST00000556170 GAFA1Q96PS6 74 aa12.2□□□□□ -0.46
NEK9-209ENST00000556170 PARD6GQ9BYG4 376 aaPredicted RBP12.2□□□□□ -0.46
NEK9-209ENST00000556170 CHD3Q12873 2000 aaKnown RBP12.2□□□□□ -0.46
NEK9-209ENST00000556170 ADIPOQQ15848 244 aa12.2□□□□□ -0.46
NEK9-209ENST00000556170 OR1L6Q8NGR2 347 aa12.2□□□□□ -0.46
NEK9-209ENST00000556170 BORCS7Q96B45 105 aa12.2□□□□□ -0.46
NEK9-209ENST00000556170 WASHC3Q9Y3C0 194 aa12.2□□□□□ -0.46
NEK9-209ENST00000556170 RPL27AP46776 148 aaKnown RBP12.19□□□□□ -0.46
NEK9-209ENST00000556170 TPPP2P59282 170 aa12.19□□□□□ -0.46
NEK9-209ENST00000556170 SFRP2Q96HF1 295 aa12.19□□□□□ -0.46
NEK9-209ENST00000556170 LINC00312Q9Y6C7 94 aa12.19□□□□□ -0.46
NEK9-209ENST00000556170 RPEL1Q2QD12 228 aa12.19□□□□□ -0.46
NEK9-209ENST00000556170 RNASE6Q93091 150 aaKnown RBP12.19□□□□□ -0.46
NEK9-209ENST00000556170 HIST1H2BLQ99880 126 aa12.19□□□□□ -0.46
NEK9-209ENST00000556170 SRD5A3Q9H8P0 318 aa12.19□□□□□ -0.46
NEK9-209ENST00000556170 NAGKQ9UJ70 344 aa12.19□□□□□ -0.46
NEK9-209ENST00000556170 NPSP0C0P6 89 aa12.19□□□□□ -0.46
NEK9-209ENST00000556170 C22orf34Q6ZV56 151 aa12.19□□□□□ -0.46
NEK9-209ENST00000556170 PAXXQ9BUH6 204 aa12.19□□□□□ -0.46
NEK9-209ENST00000556170 UPK2O00526 184 aa12.18□□□□□ -0.46
NEK9-209ENST00000556170 RBFOX2O43251 390 aaKnown RBP eCLIP12.18□□□□□ -0.46
NEK9-209ENST00000556170 TMEM200BQ69YZ2 307 aa12.18□□□□□ -0.46
NEK9-209ENST00000556170 OCC1Q8TAD7 63 aa12.18□□□□□ -0.46
NEK9-209ENST00000556170 DIRC2Q96SL1 478 aa12.18□□□□□ -0.46
NEK9-209ENST00000556170 C1QL4Q86Z23 238 aa12.18□□□□□ -0.46
NEK9-209ENST00000556170 ZNF664Q8N3J9 261 aa12.18□□□□□ -0.46
NEK9-209ENST00000556170 TRAV5A0A0B4J249 113 aa12.18□□□□□ -0.46
NEK9-209ENST00000556170 CENPWQ5EE01 88 aa12.18□□□□□ -0.46
NEK9-209ENST00000556170 PDPNQ86YL7 162 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 346.6 ms