RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 MANBALQ9NQG1 85 aa6.64□□□□□ -1.35
ATXN3-235ENST00000556082 GNG13Q9P2W3 67 aa6.64□□□□□ -1.35
ATXN3-235ENST00000556082 PXMP4Q9Y6I8 212 aa6.64□□□□□ -1.35
ATXN3-235ENST00000556082 YLPM1P49750 1951 aaKnown RBP6.64□□□□□ -1.35
ATXN3-235ENST00000556082 ACACBO00763 2458 aa6.64□□□□□ -1.35
ATXN3-235ENST00000556082 A0A1B0GV50 99 aa6.63□□□□□ -1.35
ATXN3-235ENST00000556082 IGLC7A0M8Q6 106 aa6.63□□□□□ -1.35
ATXN3-235ENST00000556082 E7EUB6 86 aa6.63□□□□□ -1.35
ATXN3-235ENST00000556082 TMEM250H0YL14 139 aa6.63□□□□□ -1.35
ATXN3-235ENST00000556082 VENTXO95231 258 aa6.63□□□□□ -1.35
ATXN3-235ENST00000556082 IGHV4-39P01824 125 aa6.63□□□□□ -1.35
ATXN3-235ENST00000556082 OPN1MWP04001 364 aa6.63□□□□□ -1.35
ATXN3-235ENST00000556082 CRYGCP07315 174 aa6.63□□□□□ -1.35
ATXN3-235ENST00000556082 LINC00869P0C866 280 aa6.63□□□□□ -1.35
ATXN3-235ENST00000556082 OPN1MW2P0DN77 364 aa6.63□□□□□ -1.35
ATXN3-235ENST00000556082 OPN1MW3P0DN78 364 aa6.63□□□□□ -1.35
ATXN3-235ENST00000556082 PAX1P15863 534 aa6.63□□□□□ -1.35
ATXN3-235ENST00000556082 NPBWR1P48145 328 aa6.63□□□□□ -1.35
ATXN3-235ENST00000556082 CDC34P49427 236 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-235ENST00000556082 SPTBN1Q01082 2364 aaKnown RBP6.63□□□□□ -1.35
ATXN3-235ENST00000556082 EBI3Q14213 229 aa6.63□□□□□ -1.35
ATXN3-235ENST00000556082 GAMTQ14353 236 aa6.63□□□□□ -1.35
ATXN3-235ENST00000556082 RHEBQ15382 184 aa6.63□□□□□ -1.35
ATXN3-235ENST00000556082 LDLRAD2Q5SZI1 272 aa6.63□□□□□ -1.35
ATXN3-235ENST00000556082 ETFRF1Q6IPR1 90 aa6.63□□□□□ -1.35
ATXN3-235ENST00000556082 PPP1R27Q86WC6 154 aa6.63□□□□□ -1.35
ATXN3-235ENST00000556082 OR10W1Q8NGF6 305 aa6.63□□□□□ -1.35
ATXN3-235ENST00000556082 RXFP4Q8TDU9 374 aa6.63□□□□□ -1.35
ATXN3-235ENST00000556082 TXNDC17Q9BRA2 123 aa6.63□□□□□ -1.35
ATXN3-235ENST00000556082 SMCO4Q9NRQ5 59 aa6.63□□□□□ -1.35
ATXN3-235ENST00000556082 TBL2Q9Y4P3 447 aaKnown RBP6.63□□□□□ -1.35
ATXN3-235ENST00000556082 NBEAQ8NFP9 2946 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 IGHV3-72A0A0B4J1Y9 119 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 A0A1W2PPV4 95 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 C7orf77A4D0Y5 90 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 FAM74A7A6NL05 159 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 VWC2LB2RUY7 222 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 CORTO00230 105 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 TIMM23O14925 209 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 ACTL6BO94805 426 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 NDUFA3O95167 84 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 MOSP00540 346 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 SNRNP70P08621 437 aaKnown RBP6.62□□□□□ -1.35
ATXN3-235ENST00000556082 STAG3L2P0CL84 134 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 STAG3L3P0CL85 134 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 OR13C7P0DN81 318 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 RPL27AP46776 148 aaKnown RBP6.62□□□□□ -1.35
ATXN3-235ENST00000556082 UBE2E1P51965 193 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 FGF8P55075 233 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-235ENST00000556082 DLX1P56177 255 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 B2MP61769 119 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 RHOBP62745 196 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 HNF4GQ14541 408 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 FAM74A3Q4VXF1 159 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 MIC13Q5XKP0 118 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 FAM122CQ6P4D5 195 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 VMO1Q7Z5L0 202 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 ZNF843Q8N446 348 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 STPG3Q8N7X2 389 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 THAP8Q8NA92 274 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 OR1P1Q8NH06 330 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 NANPQ8TBE9 248 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 MALSU1Q96EH3 234 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 BPESC1Q9GZL8 116 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 SIRT7Q9NRC8 400 aa6.62□□□□□ -1.35
ATXN3-235ENST00000556082 METTL1Q9UBP6 276 aaKnown RBP6.62□□□□□ -1.35
ATXN3-235ENST00000556082 A0A087WWC5 75 aa6.61□□□□□ -1.35
ATXN3-235ENST00000556082 ZFP92A6NM28 416 aa6.61□□□□□ -1.35
ATXN3-235ENST00000556082 B4DEV8 164 aa6.61□□□□□ -1.35
ATXN3-235ENST00000556082 H3BQ15 152 aa6.61□□□□□ -1.35
ATXN3-235ENST00000556082 NBR2O15453 112 aa6.61□□□□□ -1.35
ATXN3-235ENST00000556082 CXorf1O96002 111 aa6.61□□□□□ -1.35
ATXN3-235ENST00000556082 FBP1P09467 338 aa6.61□□□□□ -1.35
ATXN3-235ENST00000556082 SLURP1P55000 103 aa6.61□□□□□ -1.35
ATXN3-235ENST00000556082 DSCR9P59020 149 aa6.61□□□□□ -1.35
ATXN3-235ENST00000556082 CD81P60033 236 aa6.61□□□□□ -1.35
ATXN3-235ENST00000556082 SELENOTP62341 195 aa6.61□□□□□ -1.35
ATXN3-235ENST00000556082 MEF2BQ02080 365 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-235ENST00000556082 PAX8Q06710 450 aa6.61□□□□□ -1.35
ATXN3-235ENST00000556082 PNRC1Q12796 327 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-235ENST00000556082 C10orf55Q5SWW7 151 aa6.61□□□□□ -1.35
ATXN3-235ENST00000556082 FAM90A2PQ658T7 463 aa6.61□□□□□ -1.35
ATXN3-235ENST00000556082 SLC16A13Q7RTY0 426 aa6.61□□□□□ -1.35
ATXN3-235ENST00000556082 Q8N6K4 173 aa6.61□□□□□ -1.35
ATXN3-235ENST00000556082 CYB561D1Q8N8Q1 229 aa6.61□□□□□ -1.35
ATXN3-235ENST00000556082 OR1L6Q8NGR2 347 aa6.61□□□□□ -1.35
ATXN3-235ENST00000556082 OR2T10Q8NGZ9 312 aa6.61□□□□□ -1.35
ATXN3-235ENST00000556082 TVP23CQ96ET8 276 aa6.61□□□□□ -1.35
ATXN3-235ENST00000556082 BBC3Q96PG8 261 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-235ENST00000556082 RNF2Q99496 336 aa6.61□□□□□ -1.35
ATXN3-235ENST00000556082 SLC25A22Q9H936 323 aa6.61□□□□□ -1.35
ATXN3-235ENST00000556082 LPAR2Q9HBW0 351 aa6.61□□□□□ -1.35
ATXN3-235ENST00000556082 ARL2-SNX15V9GYD0 113 aa6.61□□□□□ -1.35
ATXN3-235ENST00000556082 DOCK11Q5JSL3 2073 aa6.61□□□□□ -1.35
ATXN3-235ENST00000556082 IGKV1OR2-108A0A075B7D4 117 aa6.6□□□□□ -1.35
ATXN3-235ENST00000556082 CXorf65A6NEN9 183 aa6.6□□□□□ -1.35
ATXN3-235ENST00000556082 TEX22C9J3V5 150 aa6.6□□□□□ -1.35
ATXN3-235ENST00000556082 KALRNO60229 2985 aa6.6□□□□□ -1.35
ATXN3-235ENST00000556082 CLN5O75503 358 aa6.6□□□□□ -1.35
ATXN3-235ENST00000556082 TOX4O94842 621 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms