RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.16□□□□□ -1.9
LINC00648-202ENST00000555985 ZNF738Q8NE65 137 aa3.16□□□□□ -1.9
LINC00648-202ENST00000555985 OR4C5Q8NGB2 326 aa3.16□□□□□ -1.9
LINC00648-202ENST00000555985 OR51G1Q8NGK1 321 aa3.16□□□□□ -1.9
LINC00648-202ENST00000555985 WIPF2Q8TF74 440 aaPredicted RBP3.16□□□□□ -1.9
LINC00648-202ENST00000555985 TMEM158Q8WZ71 300 aa3.16□□□□□ -1.9
LINC00648-202ENST00000555985 EMG1Q92979 244 aaKnown RBP3.16□□□□□ -1.9
LINC00648-202ENST00000555985 SPACA5Q96QH8 159 aa3.16□□□□□ -1.9
LINC00648-202ENST00000555985 VAMP8Q9BV40 100 aa3.16□□□□□ -1.9
LINC00648-202ENST00000555985 ZNRD1Q9P1U0 126 aa3.16□□□□□ -1.9
LINC00648-202ENST00000555985 UBE2J1Q9Y385 318 aaPredicted RBP3.16□□□□□ -1.9
LINC00648-202ENST00000555985 PAM16Q9Y3D7 125 aa3.16□□□□□ -1.9
LINC00648-202ENST00000555985 RFNGQ9Y644 331 aa3.16□□□□□ -1.9
LINC00648-202ENST00000555985 LINC00312Q9Y6C7 94 aa3.16□□□□□ -1.9
LINC00648-202ENST00000555985 COX11Q9Y6N1 276 aa3.16□□□□□ -1.9
LINC00648-202ENST00000555985 MDFIC2A0A1B0GVS7 189 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 MAP1LC3B2A6NCE7 125 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 FAM90A10PA6NDY2 464 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 FAM90A18PA6NE21 464 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 FAM90A16PA6NEW6 464 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 FAM90A20PA6NIJ5 464 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 FAM90A7PA6NKC0 464 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 FAM90A22PA8MWA6 464 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 FAM90A12PA8MX19 464 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 FAM90A5PA8MXJ8 464 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 FAM90A23PA8MXZ1 464 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 ANGPTL7O43827 346 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 NDUFA7O95182 113 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 IGLV1-47P01700 117 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 HBE1P02100 147 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 FAM90A15PP0C7V4 464 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 FAM90A13PP0C7W8 464 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 FAM90A14PP0C7W9 464 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 FAM90A24PP0C7X0 464 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 SRP14P37108 136 aaKnown RBP3.15□□□□□ -1.9
LINC00648-202ENST00000555985 DYNLT3P51808 116 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 DLX1P56177 255 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 RBM11P57052 281 aaKnown RBP3.15□□□□□ -1.9
LINC00648-202ENST00000555985 RPS20P60866 119 aaKnown RBP3.15□□□□□ -1.9
LINC00648-202ENST00000555985 ARF6P62330 175 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 MPV17LQ2QL34 196 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 OCIAD2Q56VL3 154 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 UTF1Q5T230 341 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 C16orf82Q7Z2V1 217 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 RTN4RL2Q86UN3 420 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 DYNAPQ8N1N2 210 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 OR5D13Q8NGL4 314 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 OR5H2Q8NGV7 314 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 IL22RA2Q969J5 263 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 TOMM40LQ969M1 308 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 CYYR1Q96J86 154 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 KRTAP9-8Q9BYQ0 159 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 MAP1LC3BQ9GZQ8 125 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 Q9N2K0 584 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 LYRM2Q9NU23 88 aaPredicted RBP3.15□□□□□ -1.9
LINC00648-202ENST00000555985 OR6C3Q9NZP0 311 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 SLC45A2Q9UMX9 530 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 ST3GAL6Q9Y274 331 aa3.15□□□□□ -1.9
LINC00648-202ENST00000555985 SONP18583 2426 aaKnown RBP3.15□□□□□ -1.91
LINC00648-202ENST00000555985 TRAV30A0A087WSZ9 112 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 A0A0U1RQK1 487 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 TMEM14DPA8MWL7 114 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 C15orf65H3BRN8 121 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 MGST3O14880 152 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 NPFFO15130 113 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 NUPR1O60356 82 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 MMP23AO75900 390 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 TYMSP04818 313 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 IGHV1-8P0DP01 117 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 GALR1P47211 349 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 RPL31P62899 125 aaKnown RBP3.15□□□□□ -1.91
LINC00648-202ENST00000555985 KLRD1Q13241 179 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 ZNF266Q14584 549 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 BRD3OSQ6XYD6 125 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 Q6ZWC4 215 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 Q8N2B8 174 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 TMEM256Q8N2U0 113 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 FAM89BQ8N5H3 189 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 RNF152Q8N8N0 203 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 C8orf31Q8N9H6 132 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 PLPPR1Q8TBJ4 325 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 RPUSD4Q96CM3 377 aaKnown RBP3.15□□□□□ -1.91
LINC00648-202ENST00000555985 SMIM12Q96EX1 92 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 Q96M66 194 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 OR5B12Q96R08 314 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 TM2D1Q9BX74 207 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 CST9LQ9H4G1 147 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 C16orf95Q9H693 158 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 SLC2A9Q9NRM0 540 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 C14orf166Q9Y224 244 aaKnown RBP3.15□□□□□ -1.91
LINC00648-202ENST00000555985 LAMTOR2Q9Y2Q5 125 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 RBM7Q9Y580 266 aaKnown RBP3.15□□□□□ -1.91
LINC00648-202ENST00000555985 KIAA2026Q5HYC2 2103 aa3.15□□□□□ -1.91
LINC00648-202ENST00000555985 A0A0A6YYD4 124 aa3.14□□□□□ -1.91
LINC00648-202ENST00000555985 TRAV1-1A0A0B4J248 108 aa3.14□□□□□ -1.91
LINC00648-202ENST00000555985 ZNF728P0DKX0 622 aa3.14□□□□□ -1.91
LINC00648-202ENST00000555985 CCL3L1P16619 93 aa3.14□□□□□ -1.91
LINC00648-202ENST00000555985 CD33P20138 364 aa3.14□□□□□ -1.91
LINC00648-202ENST00000555985 ZNF93P35789 620 aaPredicted RBP3.14□□□□□ -1.91
LINC00648-202ENST00000555985 PAFAH1B2P68402 229 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms