RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 HEATR5BQ9P2D3 2071 aa0.96□□□□□ -2.25
SCFD1-217ENST00000555953 KIF24Q5T7B8 1368 aa0.96□□□□□ -2.26
SCFD1-217ENST00000555953 ECM29Q5VYK3 1845 aa0.96□□□□□ -2.26
SCFD1-217ENST00000555953 PCF11O94913 1555 aaKnown RBP0.96□□□□□ -2.26
SCFD1-217ENST00000555953 PCDH15Q96QU1 1955 aa0.96□□□□□ -2.26
SCFD1-217ENST00000555953 FREM1Q5H8C1 2179 aa0.96□□□□□ -2.26
SCFD1-217ENST00000555953 TRBV6-5A0A0K0K1A5 114 aa0.96□□□□□ -2.26
SCFD1-217ENST00000555953 DPRXA6NFQ7 191 aa0.96□□□□□ -2.26
SCFD1-217ENST00000555953 TMEM210A6NLX4 147 aa0.96□□□□□ -2.26
SCFD1-217ENST00000555953 FADS1O60427 444 aa0.96□□□□□ -2.26
SCFD1-217ENST00000555953 CLPSP04118 112 aa0.96□□□□□ -2.26
SCFD1-217ENST00000555953 RPS4Y1P22090 263 aaKnown RBP0.96□□□□□ -2.26
SCFD1-217ENST00000555953 HSD11B1P28845 292 aa0.96□□□□□ -2.26
SCFD1-217ENST00000555953 SUPT4H1P63272 117 aaKnown RBP0.96□□□□□ -2.26
SCFD1-217ENST00000555953 STX5Q13190 355 aa0.96□□□□□ -2.26
SCFD1-217ENST00000555953 SRSF6Q13247 344 aaKnown RBP0.96□□□□□ -2.26
SCFD1-217ENST00000555953 KCNJ8Q15842 424 aa0.96□□□□□ -2.26
SCFD1-217ENST00000555953 DHFR2Q86XF0 187 aa0.96□□□□□ -2.26
SCFD1-217ENST00000555953 OR6V1Q8N148 313 aa0.96□□□□□ -2.26
SCFD1-217ENST00000555953 RASSF5Q8WWW0 418 aa0.96□□□□□ -2.26
SCFD1-217ENST00000555953 DCUN1D1Q96GG9 259 aa0.96□□□□□ -2.26
SCFD1-217ENST00000555953 CYSTM1Q9H1C7 97 aa0.96□□□□□ -2.26
SCFD1-217ENST00000555953 PSTPIP2Q9H939 334 aa0.96□□□□□ -2.26
SCFD1-217ENST00000555953 FBXL12Q9NXK8 326 aa0.96□□□□□ -2.26
SCFD1-217ENST00000555953 IDI2-AS1Q9NZ38 188 aa0.96□□□□□ -2.26
SCFD1-217ENST00000555953 MRPL27Q9P0M9 148 aaKnown RBP0.96□□□□□ -2.26
SCFD1-217ENST00000555953 TMEM56-RWDD3S4R434 201 aa0.96□□□□□ -2.26
SCFD1-217ENST00000555953 RIC1Q4ADV7 1423 aa0.96□□□□□ -2.26
SCFD1-217ENST00000555953 ROBO3Q96MS0 1386 aa0.96□□□□□ -2.26
SCFD1-217ENST00000555953 EXOC1LA0A1B0GW35 172 aa0.95□□□□□ -2.26
SCFD1-217ENST00000555953 IBA57-AS1B1ANH7 110 aa0.95□□□□□ -2.26
SCFD1-217ENST00000555953 SDCBPO00560 298 aaPredicted RBP0.95□□□□□ -2.26
SCFD1-217ENST00000555953 IFNA10P01566 189 aa0.95□□□□□ -2.26
SCFD1-217ENST00000555953 CRPP02741 224 aa0.95□□□□□ -2.26
SCFD1-217ENST00000555953 TTRP02766 147 aa0.95□□□□□ -2.26
SCFD1-217ENST00000555953 RPSAP08865 295 aaKnown RBP0.95□□□□□ -2.26
SCFD1-217ENST00000555953 CYBAP13498 195 aa0.95□□□□□ -2.26
SCFD1-217ENST00000555953 G0S2P27469 103 aa0.95□□□□□ -2.26
SCFD1-217ENST00000555953 G6PCP35575 357 aa0.95□□□□□ -2.26
SCFD1-217ENST00000555953 HBA1P69905 142 aa0.95□□□□□ -2.26
SCFD1-217ENST00000555953 CCL7P80098 99 aa0.95□□□□□ -2.26
SCFD1-217ENST00000555953 Q1T7F1 81 aa0.95□□□□□ -2.26
SCFD1-217ENST00000555953 FP248Q71RG6 208 aaPredicted RBP0.95□□□□□ -2.26
SCFD1-217ENST00000555953 RPS19BP1Q86WX3 136 aaKnown RBP0.95□□□□□ -2.26
SCFD1-217ENST00000555953 OR52R1Q8NGF1 315 aa0.95□□□□□ -2.26
SCFD1-217ENST00000555953 OR8B3Q8NGG8 313 aa0.95□□□□□ -2.26
SCFD1-217ENST00000555953 CHMP6Q96FZ7 201 aa0.95□□□□□ -2.26
SCFD1-217ENST00000555953 Q96M85 177 aa0.95□□□□□ -2.26
SCFD1-217ENST00000555953 SCGB3A1Q96QR1 104 aa0.95□□□□□ -2.26
SCFD1-217ENST00000555953 NIPSNAP1Q9BPW8 284 aa0.95□□□□□ -2.26
SCFD1-217ENST00000555953 CCDC94Q9BW85 323 aaPredicted RBP0.95□□□□□ -2.26
SCFD1-217ENST00000555953 YIPF3Q9GZM5 350 aa0.95□□□□□ -2.26
SCFD1-217ENST00000555953 CKLFQ9UBR5 152 aa0.95□□□□□ -2.26
SCFD1-217ENST00000555953 SLC22A13Q9Y226 551 aa0.95□□□□□ -2.26
SCFD1-217ENST00000555953 LHFPL6Q9Y693 200 aa0.95□□□□□ -2.26
SCFD1-217ENST00000555953 COL4A5P29400 1685 aa0.94□□□□□ -2.26
SCFD1-217ENST00000555953 PLXND1Q9Y4D7 1925 aa0.94□□□□□ -2.26
SCFD1-217ENST00000555953 TRAV26-2A0A0B4J265 109 aa0.94□□□□□ -2.26
SCFD1-217ENST00000555953 OR4C46A6NHA9 309 aa0.94□□□□□ -2.26
SCFD1-217ENST00000555953 MRPS14O60783 128 aaKnown RBP0.94□□□□□ -2.26
SCFD1-217ENST00000555953 SERPINA1P01009 418 aa0.94□□□□□ -2.26
SCFD1-217ENST00000555953 EIF2B2P49770 351 aaKnown RBP0.94□□□□□ -2.26
SCFD1-217ENST00000555953 SERPINB9P50453 376 aa0.94□□□□□ -2.26
SCFD1-217ENST00000555953 BASP1P80723 227 aaKnown RBP0.94□□□□□ -2.26
SCFD1-217ENST00000555953 REEP5Q00765 189 aa0.94□□□□□ -2.26
SCFD1-217ENST00000555953 EDDM3AQ14507 147 aa0.94□□□□□ -2.26
SCFD1-217ENST00000555953 ANKRD29Q8N6D5 301 aa0.94□□□□□ -2.26
SCFD1-217ENST00000555953 C9orf163Q8N9P6 203 aa0.94□□□□□ -2.26
SCFD1-217ENST00000555953 PFN4Q8NHR9 129 aa0.94□□□□□ -2.26
SCFD1-217ENST00000555953 BORCS7Q96B45 105 aa0.94□□□□□ -2.26
SCFD1-217ENST00000555953 TOMM6Q96B49 74 aa0.94□□□□□ -2.26
SCFD1-217ENST00000555953 CMSS1Q9BQ75 279 aaKnown RBP0.94□□□□□ -2.26
SCFD1-217ENST00000555953 C20orf27Q9GZN8 174 aa0.94□□□□□ -2.26
SCFD1-217ENST00000555953 DCSTAMPQ9H295 470 aa0.94□□□□□ -2.26
SCFD1-217ENST00000555953 C11orf68Q9H3H3 251 aaKnown RBP0.94□□□□□ -2.26
SCFD1-217ENST00000555953 BAIAP2Q9UQB8 552 aa0.94□□□□□ -2.26
SCFD1-217ENST00000555953 SETD5Q9C0A6 1442 aa0.94□□□□□ -2.26
SCFD1-217ENST00000555953 RP1L1Q8IWN7 2480 aaPredicted RBP0.94□□□□□ -2.26
SCFD1-217ENST00000555953 TONSLQ96HA7 1378 aa0.94□□□□□ -2.26
SCFD1-217ENST00000555953 KIF1BO60333 1816 aa0.94□□□□□ -2.26
SCFD1-217ENST00000555953 BAZ2BQ9UIF8 2168 aaKnown RBP0.93□□□□□ -2.26
SCFD1-217ENST00000555953 ADGRL3Q9HAR2 1447 aa0.93□□□□□ -2.26
SCFD1-217ENST00000555953 TRAV9-1A0A075B6T8 112 aa0.93□□□□□ -2.26
SCFD1-217ENST00000555953 FUOMA2VDF0 154 aa0.93□□□□□ -2.26
SCFD1-217ENST00000555953 PIRO00625 290 aa0.93□□□□□ -2.26
SCFD1-217ENST00000555953 CRYZL1O95825 349 aa0.93□□□□□ -2.26
SCFD1-217ENST00000555953 PMP2P02689 132 aa0.93□□□□□ -2.26
SCFD1-217ENST00000555953 ZNF345Q14585 488 aa0.93□□□□□ -2.26
SCFD1-217ENST00000555953 MIR17HGQ75NE6 70 aa0.93□□□□□ -2.26
SCFD1-217ENST00000555953 AAED1Q7RTV5 226 aa0.93□□□□□ -2.26
SCFD1-217ENST00000555953 DEFB128Q7Z7B8 93 aa0.93□□□□□ -2.26
SCFD1-217ENST00000555953 ZNF439Q8NDP4 499 aa0.93□□□□□ -2.26
SCFD1-217ENST00000555953 OR10X1Q8NGY0 326 aa0.93□□□□□ -2.26
SCFD1-217ENST00000555953 TERB2Q8NHR7 220 aa0.93□□□□□ -2.26
SCFD1-217ENST00000555953 H1FXQ92522 213 aaKnown RBP0.93□□□□□ -2.26
SCFD1-217ENST00000555953 TMEM106AQ96A25 262 aa0.93□□□□□ -2.26
SCFD1-217ENST00000555953 TMEM147Q9BVK8 224 aa0.93□□□□□ -2.26
SCFD1-217ENST00000555953 ULBP3Q9BZM4 244 aa0.93□□□□□ -2.26
SCFD1-217ENST00000555953 TLNRD1Q9H1K6 362 aa0.93□□□□□ -2.26
SCFD1-217ENST00000555953 UQCC1Q9NVA1 299 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms