RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 LCTP09848 1927 aa2.5□□□□□ -2.01
VRK1-205ENST00000555402 IGHV3-73A0A0B4J1V6 119 aa2.5□□□□□ -2.01
VRK1-205ENST00000555402 DHRS12A0PJE2 317 aa2.5□□□□□ -2.01
VRK1-205ENST00000555402 EFCAB10A6NFE3 127 aa2.5□□□□□ -2.01
VRK1-205ENST00000555402 RIIAD1A6NNX1 92 aa2.5□□□□□ -2.01
VRK1-205ENST00000555402 I3L521 148 aa2.5□□□□□ -2.01
VRK1-205ENST00000555402 UBE2L6O14933 153 aa2.5□□□□□ -2.01
VRK1-205ENST00000555402 TFPTP0C1Z6 253 aa2.5□□□□□ -2.01
VRK1-205ENST00000555402 S100A7P31151 101 aa2.5□□□□□ -2.01
VRK1-205ENST00000555402 CD200P41217 278 aa2.5□□□□□ -2.01
VRK1-205ENST00000555402 PIGPP57054 158 aa2.5□□□□□ -2.01
VRK1-205ENST00000555402 CDC42P60953 191 aa2.5□□□□□ -2.01
VRK1-205ENST00000555402 AP1S1P61966 158 aa2.5□□□□□ -2.01
VRK1-205ENST00000555402 Q6Q795 121 aa2.5□□□□□ -2.01
VRK1-205ENST00000555402 SSX8Q7RTT4 187 aa2.5□□□□□ -2.01
VRK1-205ENST00000555402 ZNF675Q8TD23 568 aa2.5□□□□□ -2.01
VRK1-205ENST00000555402 TOMM6Q96B49 74 aa2.5□□□□□ -2.01
VRK1-205ENST00000555402 NKX6-2Q9C056 277 aaPredicted RBP2.5□□□□□ -2.01
VRK1-205ENST00000555402 PBOV1Q9GZY1 135 aa2.5□□□□□ -2.01
VRK1-205ENST00000555402 EFCAB1Q9HAE3 211 aa2.5□□□□□ -2.01
VRK1-205ENST00000555402 TVP23BQ9NYZ1 205 aa2.5□□□□□ -2.01
VRK1-205ENST00000555402 MED11Q9P086 117 aa2.5□□□□□ -2.01
VRK1-205ENST00000555402 JPT1Q9UK76 154 aa2.5□□□□□ -2.01
VRK1-205ENST00000555402 AMMECR1Q9Y4X0 333 aaPredicted RBP2.5□□□□□ -2.01
VRK1-205ENST00000555402 CD109Q6YHK3 1445 aa2.5□□□□□ -2.01
VRK1-205ENST00000555402 CACNA1SQ13698 1873 aa2.5□□□□□ -2.01
VRK1-205ENST00000555402 RFX7Q2KHR2 1363 aa2.49□□□□□ -2.01
VRK1-205ENST00000555402 KIF13BQ9NQT8 1826 aa2.49□□□□□ -2.01
VRK1-205ENST00000555402 ZNF407Q9C0G0 2248 aa2.49□□□□□ -2.01
VRK1-205ENST00000555402 RPS4Y1P22090 263 aaKnown RBP2.49□□□□□ -2.01
VRK1-205ENST00000555402 HIST1H2BOP23527 126 aa2.49□□□□□ -2.01
VRK1-205ENST00000555402 NPPCP23582 126 aa2.49□□□□□ -2.01
VRK1-205ENST00000555402 CRYBB3P26998 211 aa2.49□□□□□ -2.01
VRK1-205ENST00000555402 HIST1H2BBP33778 126 aa2.49□□□□□ -2.01
VRK1-205ENST00000555402 HIST1H2BDP58876 126 aa2.49□□□□□ -2.01
VRK1-205ENST00000555402 HIST1H2BCP62807 126 aa2.49□□□□□ -2.01
VRK1-205ENST00000555402 FKBP1AP62942 108 aaKnown RBP2.49□□□□□ -2.01
VRK1-205ENST00000555402 HIST2H2BEQ16778 126 aa2.49□□□□□ -2.01
VRK1-205ENST00000555402 LTC4SQ16873 150 aa2.49□□□□□ -2.01
VRK1-205ENST00000555402 SCGB2B2Q4G0G5 96 aa2.49□□□□□ -2.01
VRK1-205ENST00000555402 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.49□□□□□ -2.01
VRK1-205ENST00000555402 AMTNQ6UX39 209 aa2.49□□□□□ -2.01
VRK1-205ENST00000555402 RPS4Y2Q8TD47 263 aa2.49□□□□□ -2.01
VRK1-205ENST00000555402 HIST1H2BHQ93079 126 aa2.49□□□□□ -2.01
VRK1-205ENST00000555402 CCDC115Q96NT0 180 aa2.49□□□□□ -2.01
VRK1-205ENST00000555402 HIST1H2BNQ99877 126 aa2.49□□□□□ -2.01
VRK1-205ENST00000555402 HIST1H2BMQ99879 126 aa2.49□□□□□ -2.01
VRK1-205ENST00000555402 C11orf1Q9H5F2 150 aa2.49□□□□□ -2.01
VRK1-205ENST00000555402 TXNL4BQ9NX01 149 aaKnown RBP2.49□□□□□ -2.01
VRK1-205ENST00000555402 RASL12Q9NYN1 266 aa2.49□□□□□ -2.01
VRK1-205ENST00000555402 TP73-AS1Q9UF72 201 aa2.49□□□□□ -2.01
VRK1-205ENST00000555402 FUT9Q9Y231 359 aa2.49□□□□□ -2.01
VRK1-205ENST00000555402 MINOS1-NBL1R4GNA1 71 aa2.49□□□□□ -2.01
VRK1-205ENST00000555402 ADGBQ8N7X0 1667 aa2.49□□□□□ -2.01
VRK1-205ENST00000555402 FMN1Q68DA7 1419 aa2.49□□□□□ -2.01
VRK1-205ENST00000555402 OTOFQ9HC10 1997 aa2.49□□□□□ -2.01
VRK1-205ENST00000555402 BICRAQ9NZM4 1560 aa2.49□□□□□ -2.01
VRK1-205ENST00000555402 SHANK3Q9BYB0 1731 aa2.48□□□□□ -2.01
VRK1-205ENST00000555402 IGKV1D-43A0A0B4J1Z2 117 aa2.48□□□□□ -2.01
VRK1-205ENST00000555402 GRIFINA4D1Z8 144 aa2.48□□□□□ -2.01
VRK1-205ENST00000555402 C19orf71A6NCJ1 209 aa2.48□□□□□ -2.01
VRK1-205ENST00000555402 J3KT08 172 aa2.48□□□□□ -2.01
VRK1-205ENST00000555402 UBFD1O14562 309 aaKnown RBP2.48□□□□□ -2.01
VRK1-205ENST00000555402 IGKV1-5P01602 117 aa2.48□□□□□ -2.01
VRK1-205ENST00000555402 CRHBPP24387 322 aa2.48□□□□□ -2.01
VRK1-205ENST00000555402 OR8B8Q15620 311 aa2.48□□□□□ -2.01
VRK1-205ENST00000555402 DEFB115Q30KQ5 88 aa2.48□□□□□ -2.01
VRK1-205ENST00000555402 SMIM21Q3B7S5 101 aa2.48□□□□□ -2.01
VRK1-205ENST00000555402 LGALS9BQ3B8N2 356 aa2.48□□□□□ -2.01
VRK1-205ENST00000555402 LYRM7Q5U5X0 104 aa2.48□□□□□ -2.01
VRK1-205ENST00000555402 LGALS9CQ6DKI2 356 aa2.48□□□□□ -2.01
VRK1-205ENST00000555402 OR4C16Q8NGL9 310 aa2.48□□□□□ -2.01
VRK1-205ENST00000555402 RNASE11Q8TAA1 199 aaKnown RBP2.48□□□□□ -2.01
VRK1-205ENST00000555402 FNDC9Q8TBE3 224 aa2.48□□□□□ -2.01
VRK1-205ENST00000555402 THEM6Q8WUY1 208 aa2.48□□□□□ -2.01
VRK1-205ENST00000555402 PFDN5Q99471 154 aa2.48□□□□□ -2.01
VRK1-205ENST00000555402 HSPB9Q9BQS6 159 aa2.48□□□□□ -2.01
VRK1-205ENST00000555402 DOHHQ9BU89 302 aa2.48□□□□□ -2.01
VRK1-205ENST00000555402 KLK5Q9Y337 293 aaPredicted RBP2.48□□□□□ -2.01
VRK1-205ENST00000555402 TECPR2O15040 1411 aa2.48□□□□□ -2.01
VRK1-205ENST00000555402 A0A087WUU8 490 aa2.47□□□□□ -2.01
VRK1-205ENST00000555402 TRAV41A0A0B4J266 112 aa2.47□□□□□ -2.01
VRK1-205ENST00000555402 A0A0J9YX75 114 aa2.47□□□□□ -2.01
VRK1-205ENST00000555402 TMEM269A0A1B0GVZ9 245 aa2.47□□□□□ -2.01
VRK1-205ENST00000555402 A0A1B0GW54 56 aa2.47□□□□□ -2.01
VRK1-205ENST00000555402 PIAS1O75925 651 aa2.47□□□□□ -2.01
VRK1-205ENST00000555402 FAM107AO95990 144 aa2.47□□□□□ -2.01
VRK1-205ENST00000555402 IFNA10P01566 189 aa2.47□□□□□ -2.01
VRK1-205ENST00000555402 CA5AP35218 305 aa2.47□□□□□ -2.01
VRK1-205ENST00000555402 RPL27AP46776 148 aaKnown RBP2.47□□□□□ -2.01
VRK1-205ENST00000555402 CSN1S1P47710 185 aa2.47□□□□□ -2.01
VRK1-205ENST00000555402 GABRA2P47869 451 aa2.47□□□□□ -2.01
VRK1-205ENST00000555402 RPL30P62888 115 aaKnown RBP2.47□□□□□ -2.01
VRK1-205ENST00000555402 SPATA12Q7Z6I5 190 aa2.47□□□□□ -2.01
VRK1-205ENST00000555402 KTN1-AS1Q86SY8 53 aa2.47□□□□□ -2.01
VRK1-205ENST00000555402 CLVS1Q8IUQ0 354 aaPredicted RBP2.47□□□□□ -2.01
VRK1-205ENST00000555402 OR8J3Q8NGG0 315 aa2.47□□□□□ -2.01
VRK1-205ENST00000555402 OR9Q1Q8NGQ5 310 aa2.47□□□□□ -2.01
VRK1-205ENST00000555402 OR13C4Q8NGS5 318 aa2.47□□□□□ -2.01
VRK1-205ENST00000555402 H1FXQ92522 213 aaKnown RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms