RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 RAB40CQ96S21 281 aa11.08□□□□□ -0.64
CHD8-208ENST00000555301 GNB4Q9HAV0 340 aa11.08□□□□□ -0.64
CHD8-208ENST00000555301 PLXNB1O43157 2135 aa11.08□□□□□ -0.64
CHD8-208ENST00000555301 I3L521 148 aa11.07□□□□□ -0.64
CHD8-208ENST00000555301 SSSCA1O60232 199 aa11.07□□□□□ -0.64
CHD8-208ENST00000555301 IGHV3-11P01762 117 aa11.07□□□□□ -0.64
CHD8-208ENST00000555301 H2BFSP57053 126 aa11.07□□□□□ -0.64
CHD8-208ENST00000555301 TAS2R30P59541 319 aa11.07□□□□□ -0.64
CHD8-208ENST00000555301 RRAS2P62070 204 aaPredicted RBP11.07□□□□□ -0.64
CHD8-208ENST00000555301 DEFA5Q01523 94 aa11.07□□□□□ -0.64
CHD8-208ENST00000555301 ZNF343Q6P1L6 599 aa11.07□□□□□ -0.64
CHD8-208ENST00000555301 C8orf86Q6ZUL3 223 aa11.07□□□□□ -0.64
CHD8-208ENST00000555301 RNASEH2CQ8TDP1 164 aaKnown RBP11.07□□□□□ -0.64
CHD8-208ENST00000555301 VN1R17PQ8TDU5 208 aa11.07□□□□□ -0.64
CHD8-208ENST00000555301 MISP3Q96FF7 219 aa11.07□□□□□ -0.64
CHD8-208ENST00000555301 OR5B12Q96R08 314 aa11.07□□□□□ -0.64
CHD8-208ENST00000555301 TRBV7-1A0A0A6YYK4 115 aa11.06□□□□□ -0.64
CHD8-208ENST00000555301 K7EPK0 472 aa11.06□□□□□ -0.64
CHD8-208ENST00000555301 PVALBP20472 110 aaPredicted RBP11.06□□□□□ -0.64
CHD8-208ENST00000555301 S100A10P60903 97 aa11.06□□□□□ -0.64
CHD8-208ENST00000555301 RAB11AP62491 216 aa11.06□□□□□ -0.64
CHD8-208ENST00000555301 FCN2Q15485 313 aa11.06□□□□□ -0.64
CHD8-208ENST00000555301 C18orf65Q6ZTR6 163 aa11.06□□□□□ -0.64
CHD8-208ENST00000555301 ASB13Q8WXK3 278 aa11.06□□□□□ -0.64
CHD8-208ENST00000555301 PINX1Q96BK5 328 aaKnown RBP11.06□□□□□ -0.64
CHD8-208ENST00000555301 SMIM8Q96KF7 97 aa11.06□□□□□ -0.64
CHD8-208ENST00000555301 PSENENQ9NZ42 101 aa11.06□□□□□ -0.64
CHD8-208ENST00000555301 RCL1Q9Y2P8 373 aaKnown RBP11.06□□□□□ -0.64
CHD8-208ENST00000555301 LSM5Q9Y4Y9 91 aaKnown RBP11.06□□□□□ -0.64
CHD8-208ENST00000555301 RPS10-NUDT3A0A1W2PQS6 291 aa11.05□□□□□ -0.64
CHD8-208ENST00000555301 I3L2K1 104 aa11.05□□□□□ -0.64
CHD8-208ENST00000555301 K7EIM0 57 aa11.05□□□□□ -0.64
CHD8-208ENST00000555301 L7N2F9 121 aa11.05□□□□□ -0.64
CHD8-208ENST00000555301 TSC22D2O75157 780 aa11.05□□□□□ -0.64
CHD8-208ENST00000555301 MT-CO2P00403 227 aa11.05□□□□□ -0.64
CHD8-208ENST00000555301 RLN2P04090 185 aa11.05□□□□□ -0.64
CHD8-208ENST00000555301 CXCL3P19876 107 aa11.05□□□□□ -0.64
CHD8-208ENST00000555301 OPRK1P41145 380 aa11.05□□□□□ -0.64
CHD8-208ENST00000555301 VAMP2P63027 116 aa11.05□□□□□ -0.64
CHD8-208ENST00000555301 RAB32Q13637 225 aa11.05□□□□□ -0.64
CHD8-208ENST00000555301 SPANXN5Q5MJ07 72 aa11.05□□□□□ -0.64
CHD8-208ENST00000555301 C11orf87Q6NUJ2 197 aa11.05□□□□□ -0.64
CHD8-208ENST00000555301 SCARB1Q8WTV0 552 aa11.05□□□□□ -0.64
CHD8-208ENST00000555301 TMEM170AQ8WVE7 144 aa11.05□□□□□ -0.64
CHD8-208ENST00000555301 ATP6V0BQ99437 205 aa11.05□□□□□ -0.64
CHD8-208ENST00000555301 RANGRFQ9HD47 186 aaPredicted RBP11.05□□□□□ -0.64
CHD8-208ENST00000555301 C21orf62Q9NYP8 219 aa11.05□□□□□ -0.64
CHD8-208ENST00000555301 PEF1Q9UBV8 284 aaKnown RBP11.05□□□□□ -0.64
CHD8-208ENST00000555301 STRAPQ9Y3F4 350 aaKnown RBP11.05□□□□□ -0.64
CHD8-208ENST00000555301 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.04□□□□□ -0.64
CHD8-208ENST00000555301 MFSD2BA6NFX1 497 aa11.04□□□□□ -0.64
CHD8-208ENST00000555301 HSPB1P04792 205 aaKnown RBP11.04□□□□□ -0.64
CHD8-208ENST00000555301 IFNA4P05014 189 aa11.04□□□□□ -0.64
CHD8-208ENST00000555301 OR8U8P0C7N1 319 aa11.04□□□□□ -0.64
CHD8-208ENST00000555301 PET100P0DJ07 73 aa11.04□□□□□ -0.64
CHD8-208ENST00000555301 MYCNOSP40205 109 aa11.04□□□□□ -0.64
CHD8-208ENST00000555301 ETFRF1Q6IPR1 90 aa11.04□□□□□ -0.64
CHD8-208ENST00000555301 Q6ZNX1 250 aa11.04□□□□□ -0.64
CHD8-208ENST00000555301 OR11H1Q8NG94 326 aa11.04□□□□□ -0.64
CHD8-208ENST00000555301 OR11H7Q8NGC8 314 aa11.04□□□□□ -0.64
CHD8-208ENST00000555301 OR1N2Q8NGR9 330 aa11.04□□□□□ -0.64
CHD8-208ENST00000555301 ZNF502Q8TBZ5 544 aa11.04□□□□□ -0.64
CHD8-208ENST00000555301 PPP1R1CQ8WVI7 109 aa11.04□□□□□ -0.64
CHD8-208ENST00000555301 DPF1Q92782 380 aa11.04□□□□□ -0.64
CHD8-208ENST00000555301 GAR1Q9NY12 217 aaKnown RBP11.04□□□□□ -0.64
CHD8-208ENST00000555301 PAIP2BQ9ULR5 123 aaKnown RBP11.04□□□□□ -0.64
CHD8-208ENST00000555301 IGHV3-21A0A0B4J1V1 117 aa11.03□□□□□ -0.64
CHD8-208ENST00000555301 ANKRD34BA5PLL1 514 aa11.03□□□□□ -0.64
CHD8-208ENST00000555301 C15orf62A8K5M9 175 aa11.03□□□□□ -0.64
CHD8-208ENST00000555301 LINC01619G3V211 115 aa11.03□□□□□ -0.64
CHD8-208ENST00000555301 H3BP45 60 aa11.03□□□□□ -0.64
CHD8-208ENST00000555301 CCL24O00175 119 aa11.03□□□□□ -0.64
CHD8-208ENST00000555301 DEDDO75618 318 aa11.03□□□□□ -0.64
CHD8-208ENST00000555301 TMEM50AO95807 157 aa11.03□□□□□ -0.64
CHD8-208ENST00000555301 PF4P02776 101 aa11.03□□□□□ -0.64
CHD8-208ENST00000555301 FCGR2BP31994 310 aaPredicted RBP11.03□□□□□ -0.64
CHD8-208ENST00000555301 MFAP4P55083 255 aa11.03□□□□□ -0.64
CHD8-208ENST00000555301 PAX9P55771 341 aa11.03□□□□□ -0.64
CHD8-208ENST00000555301 ZNF616Q08AN1 781 aa11.03□□□□□ -0.64
CHD8-208ENST00000555301 DEFB136Q30KP8 78 aa11.03□□□□□ -0.64
CHD8-208ENST00000555301 LRRC37A5PQ49AS3 106 aa11.03□□□□□ -0.64
CHD8-208ENST00000555301 ETV3LQ6ZN32 361 aa11.03□□□□□ -0.64
CHD8-208ENST00000555301 RAX2Q96IS3 184 aa11.03□□□□□ -0.64
CHD8-208ENST00000555301 CCDC140Q96MF4 163 aa11.03□□□□□ -0.64
CHD8-208ENST00000555301 OR4C12Q96R67 309 aa11.03□□□□□ -0.64
CHD8-208ENST00000555301 TXN2Q99757 166 aa11.03□□□□□ -0.64
CHD8-208ENST00000555301 ZNF436Q9C0F3 470 aaPredicted RBP11.03□□□□□ -0.64
CHD8-208ENST00000555301 TENM1Q9UKZ4 2725 aa11.02□□□□□ -0.64
CHD8-208ENST00000555301 IGHV3-23P01764 117 aa11.02□□□□□ -0.65
CHD8-208ENST00000555301 CLEC3BP05452 202 aa11.02□□□□□ -0.65
CHD8-208ENST00000555301 GIPP09681 153 aaPredicted RBP11.02□□□□□ -0.65
CHD8-208ENST00000555301 SLC25A4P12235 298 aa11.02□□□□□ -0.65
CHD8-208ENST00000555301 ZP3P21754 424 aa11.02□□□□□ -0.65
CHD8-208ENST00000555301 GPX4P36969 197 aaPredicted RBP11.02□□□□□ -0.65
CHD8-208ENST00000555301 NPBWR1P48145 328 aa11.02□□□□□ -0.65
CHD8-208ENST00000555301 FHL3Q13643 280 aa11.02□□□□□ -0.65
CHD8-208ENST00000555301 Q56UQ5 140 aa11.02□□□□□ -0.65
CHD8-208ENST00000555301 ACSM6Q6P461 480 aa11.02□□□□□ -0.65
CHD8-208ENST00000555301 TMEM14EPQ6UXP3 125 aa11.02□□□□□ -0.65
CHD8-208ENST00000555301 CLEC19AQ6UXS0 136 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms