RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 RXFP4Q8TDU9 374 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 CACNG8Q8WXS5 425 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 RCN3Q96D15 328 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 CCDC115Q96NT0 180 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 PITX2Q99697 317 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 SULT4A1Q9BR01 284 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 PARP11Q9NR21 331 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 TAS2R5Q9NYW4 299 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 ZMAT5Q9UDW3 170 aaKnown RBP0.84□□□□□ -2.27
PRPF39-208ENST00000554785 PYCARDQ9ULZ3 195 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 S4R3C0 116 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 HSPE1-MOB4S4R3N1 261 aa0.84□□□□□ -2.27
PRPF39-208ENST00000554785 LRP1BQ9NZR2 4599 aa0.84□□□□□ -2.28
PRPF39-208ENST00000554785 DNAH10Q8IVF4 4471 aa0.84□□□□□ -2.28
PRPF39-208ENST00000554785 ALMS1Q8TCU4 4167 aa0.84□□□□□ -2.28
PRPF39-208ENST00000554785 DYNC1H1Q14204 4646 aaKnown RBP0.84□□□□□ -2.28
PRPF39-208ENST00000554785 DNAH5Q8TE73 4624 aa0.84□□□□□ -2.28
PRPF39-208ENST00000554785 IGKV1D-17A0A075B6S4 117 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 IGKV1-27A0A075B6S5 117 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 FAM183AA6NL82 134 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 CD300LBA8K4G0 201 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 ZNF736B4DX44 427 aaPredicted RBP0.83□□□□□ -2.28
PRPF39-208ENST00000554785 C5orf58C9J3I9 102 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 M0R135 149 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 AZIN1O14977 448 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 MPDU1O75352 247 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 HSBP1O75506 76 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 SERPINB7O75635 380 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 SERPINA1P01009 418 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 TRBV12-3P01733 135 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 HLA-AP01891 365 aaKnown RBP0.83□□□□□ -2.28
PRPF39-208ENST00000554785 DBIP07108 87 aaKnown RBP0.83□□□□□ -2.28
PRPF39-208ENST00000554785 RBP1P09455 135 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 HTN3P15516 51 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 CDK2P24941 298 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 BMI1P35226 326 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 GPR4P46093 362 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 TPPP2P59282 170 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 KRTAP10-10P60014 251 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 ACTBP60709 375 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 DSTNP60981 165 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 IFITM3Q01628 133 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 TEX30Q5JUR7 227 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 GLYATL3Q5SZD4 288 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 ULK3Q6PHR2 472 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 HAGHLQ6PII5 290 aaPredicted RBP0.83□□□□□ -2.28
PRPF39-208ENST00000554785 SMARCD3Q6STE5 483 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 UNQ9165/PRO28630Q6UXU0 137 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 TMPRSS11AQ6ZMR5 421 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 LINC00336Q6ZUF6 198 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 C4orf33Q8N1A6 199 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 SLC35F6Q8N357 371 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 DRAM1Q8N682 238 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 C5orf56Q8N8D9 126 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 OR1M1Q8NGA1 313 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 OR4P4Q8NGL7 312 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 OR9I1Q8NGQ6 314 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 C4orf3Q8WVX3 66 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 RTN4IP1Q8WWV3 396 aaPredicted RBP0.83□□□□□ -2.28
PRPF39-208ENST00000554785 OR5P2Q8WZ92 322 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 GHSRQ92847 366 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 ISOC2Q96AB3 205 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 APOBEC3DQ96AK3 386 aaPredicted RBP0.83□□□□□ -2.28
PRPF39-208ENST00000554785 RMI2Q96E14 147 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 Q96M85 177 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 SCGB3A2Q96PL1 93 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 TEAD3Q99594 435 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 NAPGQ99747 312 aaPredicted RBP0.83□□□□□ -2.28
PRPF39-208ENST00000554785 MRPL57Q9BQC6 102 aaKnown RBP0.83□□□□□ -2.28
PRPF39-208ENST00000554785 AGMATQ9BSE5 352 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 COPS4Q9BT78 406 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 PLEKHA1Q9HB21 404 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 INIPQ9NRY2 104 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 C21orf62Q9NYP8 219 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 TAS2R7Q9NYW3 318 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 USE1Q9NZ43 259 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 PEF1Q9UBV8 284 aaKnown RBP0.83□□□□□ -2.28
PRPF39-208ENST00000554785 FBXL3Q9UKT7 428 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 CBY1Q9Y3M2 126 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 COMMD3-BMI1R4GMX3 469 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 LPAP08519 4548 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 IGHV3OR16-8A0A075B7F1 116 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 A0A096LPI6 279 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 IGHV3-49A0A0A0MS15 119 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 IGHV3-43A0A0B4J1X8 118 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 A0A0B4J2E0 115 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 A0A1B0GX12 115 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 TVP23AA6NH52 213 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 VGLL3A8MV65 326 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 ODF3BA8MYP8 253 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 LINC01619G3V211 115 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 I3L521 148 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 M0R1W7 72 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 RFXANKO14593 260 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 PLIN3O60664 434 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 OR5F1O95221 314 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 IFNA10P01566 189 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 MT-ND4P03905 459 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 IFNA4P05014 189 aa0.83□□□□□ -2.28
PRPF39-208ENST00000554785 GYPBP06028 91 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms