RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 UQCC1Q9NVA1 299 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 KAAG1Q9UBP8 84 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 FBXL17Q9UF56 701 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 UBE2J1Q9Y385 318 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-226ENST00000554350 OR2W1Q9Y3N9 320 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 HILPDAQ9Y5L2 63 aa4.34□□□□□ -1.71
ATXN3-226ENST00000554350 PLECQ15149 4684 aaKnown RBP4.34□□□□□ -1.72
ATXN3-226ENST00000554350 TNCP24821 2201 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 PKHD1P08F94 4074 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 TRAV24A0A0B4J272 114 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 FAM90A26D6RGX4 464 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 TOR1AO14656 332 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 SH2D1BO14796 132 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 HSPA12AO43301 675 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 PGLYRP1O75594 196 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-226ENST00000554350 SCO1O75880 301 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 DFFBO76075 338 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 SCTP09683 121 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 OR8U8P0C7N1 319 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 PGA5P0DJD9 388 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 ARHGDIBP52566 201 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 PEA15Q15121 130 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 GUCA2BQ16661 112 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 IGSF11Q5DX21 431 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 HAGHLQ6PII5 290 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-226ENST00000554350 ZNF497Q6ZNH5 498 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 TBC1D26Q86UD7 250 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 FAM219AQ8IW50 185 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 SLC35G3Q8N808 338 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 SUMF2Q8NBJ7 301 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 OR10J5Q8NHC4 309 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 NOL4LQ96MY1 436 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-226ENST00000554350 RAB40CQ96S21 281 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 TP53RKQ96S44 253 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 NABP2Q9BQ15 211 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 PBDC1Q9BVG4 233 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 PARD6GQ9BYG4 376 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-226ENST00000554350 TLNRD1Q9H1K6 362 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 NCOR1P1Q9H4R4 102 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 LYRM2Q9NU23 88 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-226ENST00000554350 COA4Q9NYJ1 87 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 CACFD1Q9UGQ2 172 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 LINC00527Q9UJ94 153 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 LSM5Q9Y4Y9 91 aaKnown RBP4.33□□□□□ -1.72
ATXN3-226ENST00000554350 WSB1Q9Y6I7 421 aa4.33□□□□□ -1.72
ATXN3-226ENST00000554350 TRAV1-1A0A0B4J248 108 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 IGKV1-6A0A0C4DH72 117 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 C12orf77C9JDV5 145 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 F8W036 122 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 RRHO14718 337 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 MED6O75586 246 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 RHBDL1O75783 438 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 PTBP3O95758 552 aaKnown RBP4.32□□□□□ -1.72
ATXN3-226ENST00000554350 CTRB1P17538 263 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 PRKACAP17612 351 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 CA6P23280 308 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 CD24P25063 80 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 SNCAP37840 140 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 LPAR6P43657 344 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 FXYD4P59646 89 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 SLC35B1P78383 322 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 DEFA5Q01523 94 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 FLI1Q01543 452 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-226ENST00000554350 EWSR1Q01844 656 aaKnown RBP eCLIP4.32□□□□□ -1.72
ATXN3-226ENST00000554350 SP6Q3SY56 376 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 PHLDA2Q53GA4 152 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 CTRB2Q6GPI1 263 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 TRAT1Q6PIZ9 186 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 ZNF818PQ6ZRF7 136 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 C16orf82Q7Z2V1 217 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 PUSL1Q8N0Z8 303 aaKnown RBP4.32□□□□□ -1.72
ATXN3-226ENST00000554350 GCSAMQ8N6F7 178 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 TMEM252Q8N6L7 170 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 OR10V1Q8NGI7 309 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 OR52M1Q8NGK5 317 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 MPLKIPQ8TAP9 179 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 LRRC29Q8WV35 223 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 RNF183Q96D59 192 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 MALSU1Q96EH3 234 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 SLC25A33Q9BSK2 321 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 ADAT1Q9BUB4 502 aaKnown RBP4.32□□□□□ -1.72
ATXN3-226ENST00000554350 TM2D2Q9BX73 214 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 OR2S2Q9NQN1 319 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 ZNF581Q9P0T4 197 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 SLC25A10Q9UBX3 287 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-226ENST00000554350 RNF150Q9ULK6 438 aa4.32□□□□□ -1.72
ATXN3-226ENST00000554350 RCL1Q9Y2P8 373 aaKnown RBP4.32□□□□□ -1.72
ATXN3-226ENST00000554350 LOC102723971A0A1B0GUV8 181 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 hCG_1809904A0A1W2PP81 198 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 A0A1W2PPE2 198 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 A0A1W2PR64 198 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 A0A1W2PRV1 198 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 H7C2Y5 167 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 K7N7A8 449 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 SLC33A1O00400 549 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-226ENST00000554350 TSPAN4O14817 238 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 SOX15O60248 233 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 OR2H2O95918 312 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 HBE1P02100 147 aa4.31□□□□□ -1.72
ATXN3-226ENST00000554350 TFF1P04155 84 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms