RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 SSX9Q7RTT3 188 aa10.07□□□□□ -0.8
SHMT2-211ENST00000554310 PLEKHA2Q9HB19 425 aa10.07□□□□□ -0.8
SHMT2-211ENST00000554310 TMED3Q9Y3Q3 217 aa10.07□□□□□ -0.8
SHMT2-211ENST00000554310 SORL1Q92673 2214 aa10.06□□□□□ -0.8
SHMT2-211ENST00000554310 PIGBOS1A0A0B4J2F0 54 aa10.06□□□□□ -0.8
SHMT2-211ENST00000554310 ANKRD34BA5PLL1 514 aa10.06□□□□□ -0.8
SHMT2-211ENST00000554310 FAM223BA6NKX1 122 aa10.06□□□□□ -0.8
SHMT2-211ENST00000554310 S100GP29377 79 aa10.06□□□□□ -0.8
SHMT2-211ENST00000554310 AP2S1P53680 142 aaPredicted RBP10.06□□□□□ -0.8
SHMT2-211ENST00000554310 RAB32Q13637 225 aa10.06□□□□□ -0.8
SHMT2-211ENST00000554310 SP6Q3SY56 376 aa10.06□□□□□ -0.8
SHMT2-211ENST00000554310 TBC1D26Q86UD7 250 aa10.06□□□□□ -0.8
SHMT2-211ENST00000554310 ZNF429Q86V71 674 aa10.06□□□□□ -0.8
SHMT2-211ENST00000554310 FAM223AQ8IWN6 122 aa10.06□□□□□ -0.8
SHMT2-211ENST00000554310 TTC9CQ8N5M4 171 aa10.06□□□□□ -0.8
SHMT2-211ENST00000554310 ST8SIA2Q92186 375 aa10.06□□□□□ -0.8
SHMT2-211ENST00000554310 DLX4Q92988 240 aaPredicted RBP10.06□□□□□ -0.8
SHMT2-211ENST00000554310 PHYHIPLQ96FC7 376 aa10.06□□□□□ -0.8
SHMT2-211ENST00000554310 TMEM56Q96MV1 263 aa10.06□□□□□ -0.8
SHMT2-211ENST00000554310 AQP10Q96PS8 301 aa10.06□□□□□ -0.8
SHMT2-211ENST00000554310 ARPC5LQ9BPX5 153 aa10.06□□□□□ -0.8
SHMT2-211ENST00000554310 TMEM222Q9H0R3 208 aa10.06□□□□□ -0.8
SHMT2-211ENST00000554310 ZNF257Q9Y2Q1 563 aa10.06□□□□□ -0.8
SHMT2-211ENST00000554310 TMEM56-RWDD3S4R434 201 aa10.06□□□□□ -0.8
SHMT2-211ENST00000554310 NPIPB5A8MRT5 1133 aa10.05□□□□□ -0.8
SHMT2-211ENST00000554310 TEX22C9J3V5 150 aa10.05□□□□□ -0.8
SHMT2-211ENST00000554310 PGLYRP1O75594 196 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-211ENST00000554310 S1PR2O95136 353 aa10.05□□□□□ -0.8
SHMT2-211ENST00000554310 F2RP25116 425 aa10.05□□□□□ -0.8
SHMT2-211ENST00000554310 UCP1P25874 307 aa10.05□□□□□ -0.8
SHMT2-211ENST00000554310 ERVK-16P61578 105 aa10.05□□□□□ -0.8
SHMT2-211ENST00000554310 RHOGP84095 191 aa10.05□□□□□ -0.8
SHMT2-211ENST00000554310 DEFA5Q01523 94 aa10.05□□□□□ -0.8
SHMT2-211ENST00000554310 ZNF343Q6P1L6 599 aa10.05□□□□□ -0.8
SHMT2-211ENST00000554310 NECAP1Q8NC96 275 aa10.05□□□□□ -0.8
SHMT2-211ENST00000554310 OR1S1Q8NH92 325 aa10.05□□□□□ -0.8
SHMT2-211ENST00000554310 IL22RA2Q969J5 263 aa10.05□□□□□ -0.8
SHMT2-211ENST00000554310 TP53RKQ96S44 253 aa10.05□□□□□ -0.8
SHMT2-211ENST00000554310 TMEM140Q9NV12 185 aa10.05□□□□□ -0.8
SHMT2-211ENST00000554310 MED9Q9NWA0 146 aa10.05□□□□□ -0.8
SHMT2-211ENST00000554310 OR5AC2Q9NZP5 309 aa10.05□□□□□ -0.8
SHMT2-211ENST00000554310 GSKIPQ9P0R6 139 aa10.05□□□□□ -0.8
SHMT2-211ENST00000554310 TRBV9A0A0B4J1U6 114 aa10.04□□□□□ -0.8
SHMT2-211ENST00000554310 MARCH11A6NNE9 402 aa10.04□□□□□ -0.8
SHMT2-211ENST00000554310 H0Y980 276 aa10.04□□□□□ -0.8
SHMT2-211ENST00000554310 SAP30O75446 220 aa10.04□□□□□ -0.8
SHMT2-211ENST00000554310 DEDDO75618 318 aa10.04□□□□□ -0.8
SHMT2-211ENST00000554310 CDS2O95674 445 aa10.04□□□□□ -0.8
SHMT2-211ENST00000554310 RLN2P04090 185 aa10.04□□□□□ -0.8
SHMT2-211ENST00000554310 SMCO1Q147U7 214 aa10.04□□□□□ -0.8
SHMT2-211ENST00000554310 FAM209BQ5JX69 171 aa10.04□□□□□ -0.8
SHMT2-211ENST00000554310 ACSM6Q6P461 480 aa10.04□□□□□ -0.8
SHMT2-211ENST00000554310 LYZL2Q7Z4W2 148 aa10.04□□□□□ -0.8
SHMT2-211ENST00000554310 DMBX1Q8NFW5 382 aa10.04□□□□□ -0.8
SHMT2-211ENST00000554310 LHFPL5Q8TAF8 219 aa10.04□□□□□ -0.8
SHMT2-211ENST00000554310 STOML3Q8TAV4 291 aa10.04□□□□□ -0.8
SHMT2-211ENST00000554310 RRNAD1Q96FB5 475 aaKnown RBP10.04□□□□□ -0.8
SHMT2-211ENST00000554310 PEF1Q9UBV8 284 aaKnown RBP10.04□□□□□ -0.8
SHMT2-211ENST00000554310 ZNF256Q9Y2P7 627 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-211ENST00000554310 A0A1B0GW64 132 aa10.03□□□□□ -0.8
SHMT2-211ENST00000554310 UPK2O00526 184 aa10.03□□□□□ -0.8
SHMT2-211ENST00000554310 RBMXL2O75526 392 aaKnown RBP10.03□□□□□ -0.8
SHMT2-211ENST00000554310 PRH1P02810 166 aa10.03□□□□□ -0.8
SHMT2-211ENST00000554310 IL6RP08887 468 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-211ENST00000554310 NMBP08949 121 aa10.03□□□□□ -0.8
SHMT2-211ENST00000554310 S100A10P60903 97 aa10.03□□□□□ -0.8
SHMT2-211ENST00000554310 TMEM268Q5VZI3 342 aa10.03□□□□□ -0.8
SHMT2-211ENST00000554310 THOC7Q6I9Y2 204 aaKnown RBP10.03□□□□□ -0.8
SHMT2-211ENST00000554310 ALKAL2Q6UX46 152 aa10.03□□□□□ -0.8
SHMT2-211ENST00000554310 SELENOHQ8IZQ5 122 aaKnown RBP10.03□□□□□ -0.8
SHMT2-211ENST00000554310 SLC35G3Q8N808 338 aa10.03□□□□□ -0.8
SHMT2-211ENST00000554310 SRSF8Q9BRL6 282 aaKnown RBP10.03□□□□□ -0.8
SHMT2-211ENST00000554310 ELOVL1Q9BW60 279 aa10.03□□□□□ -0.8
SHMT2-211ENST00000554310 ZNF471Q9BX82 626 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-211ENST00000554310 COMMD5Q9GZQ3 224 aa10.03□□□□□ -0.8
SHMT2-211ENST00000554310 SLC25A32Q9H2D1 315 aa10.03□□□□□ -0.8
SHMT2-211ENST00000554310 FAM212BQ9NTI7 297 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-211ENST00000554310 E5RGE8 158 aa10.02□□□□□ -0.81
SHMT2-211ENST00000554310 E7EUB6 86 aa10.02□□□□□ -0.81
SHMT2-211ENST00000554310 K7EPK0 472 aa10.02□□□□□ -0.81
SHMT2-211ENST00000554310 TAAR5O14804 337 aa10.02□□□□□ -0.81
SHMT2-211ENST00000554310 CRYGCP07315 174 aa10.02□□□□□ -0.81
SHMT2-211ENST00000554310 OR2B8PP59922 312 aa10.02□□□□□ -0.81
SHMT2-211ENST00000554310 ATP5G2Q06055 141 aa10.02□□□□□ -0.81
SHMT2-211ENST00000554310 DEFB121Q5J5C9 76 aa10.02□□□□□ -0.81
SHMT2-211ENST00000554310 OR4D5Q8NGN0 318 aa10.02□□□□□ -0.81
SHMT2-211ENST00000554310 OR4C12Q96R67 309 aa10.02□□□□□ -0.81
SHMT2-211ENST00000554310 CYTL1Q9NRR1 136 aa10.02□□□□□ -0.81
SHMT2-211ENST00000554310 NSG2Q9Y328 171 aa10.02□□□□□ -0.81
SHMT2-211ENST00000554310 TRAV3A0A0B4J244 114 aa10.01□□□□□ -0.81
SHMT2-211ENST00000554310 CGB1A6NKQ9 187 aa10.01□□□□□ -0.81
SHMT2-211ENST00000554310 ST8SIA3O43173 380 aa10.01□□□□□ -0.81
SHMT2-211ENST00000554310 OR2J3O76001 311 aa10.01□□□□□ -0.81
SHMT2-211ENST00000554310 TRBV12-3P01733 135 aa10.01□□□□□ -0.81
SHMT2-211ENST00000554310 MBPP02686 304 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-211ENST00000554310 TPT1P13693 172 aaKnown RBP10.01□□□□□ -0.81
SHMT2-211ENST00000554310 MYOD1P15172 320 aa10.01□□□□□ -0.81
SHMT2-211ENST00000554310 AREGP15514 252 aa10.01□□□□□ -0.81
SHMT2-211ENST00000554310 HIST1H1BP16401 226 aaKnown RBP10.01□□□□□ -0.81
SHMT2-211ENST00000554310 CTRB1P17538 263 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms