RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 PRSS57Q6UWY2 283 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 H2BFWTQ7Z2G1 175 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 LINC01551Q86U37 167 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 HAPLN4Q86UW8 402 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 DRAM1Q8N682 238 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 TMEM251Q8N6I4 163 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 OR4B1Q8NGF8 309 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 CMTM2Q8TAZ6 248 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 SDSLQ96GA7 329 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 SFRP2Q96HF1 295 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 TMEM68Q96MH6 324 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 MS4A10Q96PG2 267 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 PCGF1Q9BSM1 259 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 PRO1933Q9H354 126 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 NCOR1P1Q9H4R4 102 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 DCAF16Q9NXF7 216 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 ZNF581Q9P0T4 197 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 FUT9Q9Y231 359 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 AKAP6Q13023 2319 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 JMJD1CQ15652 2540 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 NSD1Q96L73 2696 aaPredicted RBP4.85□□□□□ -1.63
VPS33B-203ENST00000554264 SAA2-SAA4A0A096LPE2 208 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 TRGV5A0A0B4J1U4 118 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 A0A0U1RQK1 487 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 C20orf202A1L168 122 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 ZNF320A2RRD8 509 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 PMS2P5A8MQ11 134 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 INAFM1C9JVW0 142 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 SLC33A1O00400 549 aaPredicted RBP4.85□□□□□ -1.63
VPS33B-203ENST00000554264 CDIPTO14735 213 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 SPRY2O43597 315 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 SYNGR1O43759 233 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 PAGE4O60829 102 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 SMPD2O60906 423 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 TRAPPC6AO75865 159 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 TNFSF13O75888 250 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 OR2H2O95918 312 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 SCGB1D1O95968 90 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 HPRT1P00492 218 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 OR10J4P0C629 311 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 STAG3L2P0CL84 134 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 STAG3L3P0CL85 134 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 IL3RAP26951 378 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 CEACAM8P31997 349 aaPredicted RBP4.85□□□□□ -1.63
VPS33B-203ENST00000554264 TIMP3P35625 211 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 ERVS71-1P61550 626 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 ERVK-16P61578 105 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 RHOBP62745 196 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 ARL16Q0P5N6 197 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 EIF4EBP1Q13541 118 aaPredicted RBP4.85□□□□□ -1.63
VPS33B-203ENST00000554264 DMRTC1Q5HYR2 192 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 OR10J3Q5JRS4 329 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 OR8G2PQ6IF36 304 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 ACSM6Q6P461 480 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 TEX43Q6ZNM6 134 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 YRDCQ86U90 279 aaKnown RBP4.85□□□□□ -1.63
VPS33B-203ENST00000554264 TGIF2LXQ8IUE1 241 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 KLHDC1Q8N7A1 406 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.85□□□□□ -1.63
VPS33B-203ENST00000554264 OR10G8Q8NGN5 311 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 IL1F10Q8WWZ1 152 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 RDH5Q92781 318 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 C11orf52Q96A22 123 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 MIEN1Q9BRT3 115 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 CHRDL1Q9BU40 450 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 GNB1LQ9BYB4 327 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 PRRG4Q9BZD6 226 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 VSIRQ9H7M9 311 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 SLC25A22Q9H936 323 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 HES4Q9HCC6 221 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 TMEM167BQ9NRX6 74 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 TMEM106BQ9NUM4 274 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 ZNF586Q9NXT0 402 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 ELOVL5Q9NYP7 299 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 IL36BQ9NZH7 164 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 SLC25A10Q9UBX3 287 aaPredicted RBP4.85□□□□□ -1.63
VPS33B-203ENST00000554264 PPP1R3CQ9UQK1 317 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 NCKAP5O14513 1909 aa4.85□□□□□ -1.63
VPS33B-203ENST00000554264 TRGV10A0A0A0MS01 117 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 A0A0G2JMM0 328 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 A0A1W2PPB8 328 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 A0A1W2PRS3 328 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 ODAMA1E959 279 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 KIR3DP1A8MWS1 328 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 IQCF6A8MYZ5 107 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 SPINT2O43291 252 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 CRLF1O75462 422 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 HAND1O96004 215 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 NGFP01138 241 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 OR5G3P0C626 314 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 SELLP14151 372 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 CRISP2P16562 243 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 GZMHP20718 246 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 CCNOP22674 350 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 OR3A1P47881 315 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 LHX2P50458 406 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 CLDN18P56856 261 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 RPEL1Q2QD12 228 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 SMIM21Q3B7S5 101 aa4.84□□□□□ -1.63
VPS33B-203ENST00000554264 FAM78BQ5VT40 261 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms