RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 IGLV11-55A0A075B6I3 123 aa11.38□□□□□ -0.59
SHMT2-210ENST00000553950 IGSF23A1L1A6 192 aa11.38□□□□□ -0.59
SHMT2-210ENST00000553950 G3V318 75 aa11.38□□□□□ -0.59
SHMT2-210ENST00000553950 DFFBO76075 338 aa11.38□□□□□ -0.59
SHMT2-210ENST00000553950 IGHG4P01861 327 aa11.38□□□□□ -0.59
SHMT2-210ENST00000553950 HNRNPCP07910 306 aaKnown RBP eCLIP11.38□□□□□ -0.59
SHMT2-210ENST00000553950 ELANEP08246 267 aa11.38□□□□□ -0.59
SHMT2-210ENST00000553950 METTL15P1P0C7V9 234 aa11.38□□□□□ -0.59
SHMT2-210ENST00000553950 HKR1P10072 659 aa11.38□□□□□ -0.59
SHMT2-210ENST00000553950 PPIFP30405 207 aaKnown RBP11.38□□□□□ -0.59
SHMT2-210ENST00000553950 S100A11P31949 105 aa11.38□□□□□ -0.59
SHMT2-210ENST00000553950 OPRK1P41145 380 aa11.38□□□□□ -0.59
SHMT2-210ENST00000553950 CFHR3Q02985 330 aa11.38□□□□□ -0.59
SHMT2-210ENST00000553950 FOXE3Q13461 319 aa11.38□□□□□ -0.59
SHMT2-210ENST00000553950 ATP6V1FQ16864 119 aa11.38□□□□□ -0.59
SHMT2-210ENST00000553950 Q5BKY6 102 aa11.38□□□□□ -0.59
SHMT2-210ENST00000553950 SLC25A24Q6NUK1 477 aa11.38□□□□□ -0.59
SHMT2-210ENST00000553950 TEX38Q6PEX7 206 aa11.38□□□□□ -0.59
SHMT2-210ENST00000553950 NECAP1Q8NC96 275 aa11.38□□□□□ -0.59
SHMT2-210ENST00000553950 OR4X2Q8NGF9 303 aa11.38□□□□□ -0.59
SHMT2-210ENST00000553950 OR1S2Q8NGQ3 325 aa11.38□□□□□ -0.59
SHMT2-210ENST00000553950 CACNG8Q8WXS5 425 aa11.38□□□□□ -0.59
SHMT2-210ENST00000553950 MISP3Q96FF7 219 aa11.38□□□□□ -0.59
SHMT2-210ENST00000553950 CXorf58Q96LI9 332 aa11.38□□□□□ -0.59
SHMT2-210ENST00000553950 NOL4LQ96MY1 436 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-210ENST00000553950 ZNF355PQ9NSJ1 428 aa11.38□□□□□ -0.59
SHMT2-210ENST00000553950 FAM24AA6NFZ4 105 aa11.37□□□□□ -0.59
SHMT2-210ENST00000553950 LINC01548A6NM66 108 aa11.37□□□□□ -0.59
SHMT2-210ENST00000553950 TAAR5O14804 337 aa11.37□□□□□ -0.59
SHMT2-210ENST00000553950 GPX4P36969 197 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-210ENST00000553950 AP2S1P53680 142 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-210ENST00000553950 DLK1P80370 383 aa11.37□□□□□ -0.59
SHMT2-210ENST00000553950 SLC38A11Q08AI6 406 aa11.37□□□□□ -0.59
SHMT2-210ENST00000553950 ZNF266Q14584 549 aa11.37□□□□□ -0.59
SHMT2-210ENST00000553950 TMEM95Q3KNT9 176 aa11.37□□□□□ -0.59
SHMT2-210ENST00000553950 OR8G2PQ6IF36 304 aa11.37□□□□□ -0.59
SHMT2-210ENST00000553950 Q6ZS46 218 aa11.37□□□□□ -0.59
SHMT2-210ENST00000553950 OR5T1Q8NG75 326 aa11.37□□□□□ -0.59
SHMT2-210ENST00000553950 SLC35E1Q96K37 410 aa11.37□□□□□ -0.59
SHMT2-210ENST00000553950 ATP6V0BQ99437 205 aa11.37□□□□□ -0.59
SHMT2-210ENST00000553950 SERTAD4Q9NUC0 356 aa11.37□□□□□ -0.59
SHMT2-210ENST00000553950 GAR1Q9NY12 217 aaKnown RBP11.37□□□□□ -0.59
SHMT2-210ENST00000553950 TRBV9A0A0B4J1U6 114 aa11.36□□□□□ -0.59
SHMT2-210ENST00000553950 A0A0G2JLM5 398 aa11.36□□□□□ -0.59
SHMT2-210ENST00000553950 RNF222A6NCQ9 220 aa11.36□□□□□ -0.59
SHMT2-210ENST00000553950 IGLV1-40P01703 118 aa11.36□□□□□ -0.59
SHMT2-210ENST00000553950 CD300CQ08708 224 aa11.36□□□□□ -0.59
SHMT2-210ENST00000553950 SLC16A13Q7RTY0 426 aa11.36□□□□□ -0.59
SHMT2-210ENST00000553950 CENPVQ7Z7K6 275 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-210ENST00000553950 VN1R17PQ8TDU5 208 aa11.36□□□□□ -0.59
SHMT2-210ENST00000553950 USMG5Q96IX5 58 aa11.36□□□□□ -0.59
SHMT2-210ENST00000553950 TMEM147Q9BVK8 224 aa11.36□□□□□ -0.59
SHMT2-210ENST00000553950 KANTRA0A1W2PQU2 76 aa11.35□□□□□ -0.59
SHMT2-210ENST00000553950 CLPSL1A2RUU4 121 aa11.35□□□□□ -0.59
SHMT2-210ENST00000553950 CST7O76096 145 aa11.35□□□□□ -0.59
SHMT2-210ENST00000553950 TRGV3P03979 118 aa11.35□□□□□ -0.59
SHMT2-210ENST00000553950 PF4V1P10720 104 aa11.35□□□□□ -0.59
SHMT2-210ENST00000553950 TPPP2P59282 170 aa11.35□□□□□ -0.59
SHMT2-210ENST00000553950 RHOGP84095 191 aa11.35□□□□□ -0.59
SHMT2-210ENST00000553950 CD69Q07108 199 aa11.35□□□□□ -0.59
SHMT2-210ENST00000553950 FOXL1Q12952 345 aa11.35□□□□□ -0.59
SHMT2-210ENST00000553950 KCNRGQ8N5I3 272 aa11.35□□□□□ -0.59
SHMT2-210ENST00000553950 OR11H4Q8NGC9 324 aa11.35□□□□□ -0.59
SHMT2-210ENST00000553950 OR5C1Q8NGR4 320 aa11.35□□□□□ -0.59
SHMT2-210ENST00000553950 TMEM170AQ8WVE7 144 aa11.35□□□□□ -0.59
SHMT2-210ENST00000553950 EEF1AKMT3Q96AZ1 226 aa11.35□□□□□ -0.59
SHMT2-210ENST00000553950 ATP5SQ99766 215 aa11.35□□□□□ -0.59
SHMT2-210ENST00000553950 LINC00527Q9UJ94 153 aa11.35□□□□□ -0.59
SHMT2-210ENST00000553950 BORCS7-ASMTA0A0B4J1R7 106 aa11.34□□□□□ -0.59
SHMT2-210ENST00000553950 PMS2P5A8MQ11 134 aa11.34□□□□□ -0.59
SHMT2-210ENST00000553950 PRSS46E5RG02 174 aa11.34□□□□□ -0.59
SHMT2-210ENST00000553950 PSMB8P28062 276 aa11.34□□□□□ -0.59
SHMT2-210ENST00000553950 EIF2B2P49770 351 aaKnown RBP11.34□□□□□ -0.59
SHMT2-210ENST00000553950 EIF5AP63241 154 aaKnown RBP11.34□□□□□ -0.59
SHMT2-210ENST00000553950 AKR1C1Q04828 323 aa11.34□□□□□ -0.59
SHMT2-210ENST00000553950 KLHDC1Q8N7A1 406 aa11.34□□□□□ -0.59
SHMT2-210ENST00000553950 TMEM217Q8N7C4 229 aa11.34□□□□□ -0.59
SHMT2-210ENST00000553950 RNF152Q8N8N0 203 aa11.34□□□□□ -0.59
SHMT2-210ENST00000553950 LINC01006Q8NI28 216 aa11.34□□□□□ -0.59
SHMT2-210ENST00000553950 FANCD2OSQ96PS1 177 aa11.34□□□□□ -0.59
SHMT2-210ENST00000553950 ARPC5LQ9BPX5 153 aa11.34□□□□□ -0.59
SHMT2-210ENST00000553950 ARL6Q9H0F7 186 aa11.34□□□□□ -0.59
SHMT2-210ENST00000553950 KCNIP2Q9NS61 270 aa11.34□□□□□ -0.59
SHMT2-210ENST00000553950 UQCC1Q9NVA1 299 aa11.34□□□□□ -0.59
SHMT2-210ENST00000553950 FBXL7Q9UJT9 491 aa11.34□□□□□ -0.59
SHMT2-210ENST00000553950 RNF114Q9Y508 228 aa11.34□□□□□ -0.59
SHMT2-210ENST00000553950 C2CD3Q4AC94 2353 aa11.33□□□□□ -0.6
SHMT2-210ENST00000553950 TRBV7-1A0A0A6YYK4 115 aa11.33□□□□□ -0.6
SHMT2-210ENST00000553950 BCL2L11O43521 198 aa11.33□□□□□ -0.6
SHMT2-210ENST00000553950 SOX15O60248 233 aa11.33□□□□□ -0.6
SHMT2-210ENST00000553950 MPDU1O75352 247 aa11.33□□□□□ -0.6
SHMT2-210ENST00000553950 OR2J3O76001 311 aa11.33□□□□□ -0.6
SHMT2-210ENST00000553950 MT-CO2P00403 227 aa11.33□□□□□ -0.6
SHMT2-210ENST00000553950 IFNA5P01569 189 aa11.33□□□□□ -0.6
SHMT2-210ENST00000553950 FCGR2BP31994 310 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-210ENST00000553950 NPBWR1P48145 328 aa11.33□□□□□ -0.6
SHMT2-210ENST00000553950 MFAP2P55001 183 aa11.33□□□□□ -0.6
SHMT2-210ENST00000553950 C15orf32Q32M92 178 aa11.33□□□□□ -0.6
SHMT2-210ENST00000553950 WFDC12Q8WWY7 111 aa11.33□□□□□ -0.6
SHMT2-210ENST00000553950 TXN2Q99757 166 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms