RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 GNB4Q9HAV0 340 aa9.5□□□□□ -0.89
SHMT2-209ENST00000553949 THYN1Q9P016 225 aa9.5□□□□□ -0.89
SHMT2-209ENST00000553949 RCL1Q9Y2P8 373 aaKnown RBP9.5□□□□□ -0.89
SHMT2-209ENST00000553949 LSM5Q9Y4Y9 91 aaKnown RBP9.5□□□□□ -0.89
SHMT2-209ENST00000553949 NUDT19A8MXV4 375 aa9.49□□□□□ -0.89
SHMT2-209ENST00000553949 TMEM50AO95807 157 aa9.49□□□□□ -0.89
SHMT2-209ENST00000553949 IGHV3-11P01762 117 aa9.49□□□□□ -0.89
SHMT2-209ENST00000553949 NPY1RP25929 384 aa9.49□□□□□ -0.89
SHMT2-209ENST00000553949 ATP5IP56385 69 aaPredicted RBP9.49□□□□□ -0.89
SHMT2-209ENST00000553949 S100A10P60903 97 aa9.49□□□□□ -0.89
SHMT2-209ENST00000553949 RPP30P78346 268 aaKnown RBP9.49□□□□□ -0.89
SHMT2-209ENST00000553949 RAB32Q13637 225 aa9.49□□□□□ -0.89
SHMT2-209ENST00000553949 KLHL30-AS1Q8NEE0 82 aa9.49□□□□□ -0.89
SHMT2-209ENST00000553949 SPATA3Q8NHX4 192 aa9.49□□□□□ -0.89
SHMT2-209ENST00000553949 C4orf3Q8WVX3 66 aa9.49□□□□□ -0.89
SHMT2-209ENST00000553949 MISP3Q96FF7 219 aa9.49□□□□□ -0.89
SHMT2-209ENST00000553949 SMIM8Q96KF7 97 aa9.49□□□□□ -0.89
SHMT2-209ENST00000553949 OR5B12Q96R08 314 aa9.49□□□□□ -0.89
SHMT2-209ENST00000553949 H3BP45 60 aa9.48□□□□□ -0.89
SHMT2-209ENST00000553949 I3L2K1 104 aa9.48□□□□□ -0.89
SHMT2-209ENST00000553949 K7EIM0 57 aa9.48□□□□□ -0.89
SHMT2-209ENST00000553949 CORTO00230 105 aa9.48□□□□□ -0.89
SHMT2-209ENST00000553949 LGALS1P09382 135 aaKnown RBP9.48□□□□□ -0.89
SHMT2-209ENST00000553949 PAX9P55771 341 aa9.48□□□□□ -0.89
SHMT2-209ENST00000553949 TAS2R30P59541 319 aa9.48□□□□□ -0.89
SHMT2-209ENST00000553949 EXOSC2Q13868 293 aaKnown RBP9.48□□□□□ -0.89
SHMT2-209ENST00000553949 LRRC37A5PQ49AS3 106 aa9.48□□□□□ -0.89
SHMT2-209ENST00000553949 SPANXN5Q5MJ07 72 aa9.48□□□□□ -0.89
SHMT2-209ENST00000553949 C8orf86Q6ZUL3 223 aa9.48□□□□□ -0.89
SHMT2-209ENST00000553949 NOXA1Q86UR1 476 aa9.48□□□□□ -0.89
SHMT2-209ENST00000553949 PPP1R1CQ8WVI7 109 aa9.48□□□□□ -0.89
SHMT2-209ENST00000553949 PINX1Q96BK5 328 aaKnown RBP9.48□□□□□ -0.89
SHMT2-209ENST00000553949 CXorf58Q96LI9 332 aa9.48□□□□□ -0.89
SHMT2-209ENST00000553949 OR4C12Q96R67 309 aa9.48□□□□□ -0.89
SHMT2-209ENST00000553949 ZNF436Q9C0F3 470 aaPredicted RBP9.48□□□□□ -0.89
SHMT2-209ENST00000553949 PSENENQ9NZ42 101 aa9.48□□□□□ -0.89
SHMT2-209ENST00000553949 S4R3C0 116 aa9.48□□□□□ -0.89
SHMT2-209ENST00000553949 IGHV3-21A0A0B4J1V1 117 aa9.47□□□□□ -0.89
SHMT2-209ENST00000553949 MFSD2BA6NFX1 497 aa9.47□□□□□ -0.89
SHMT2-209ENST00000553949 C15orf62A8K5M9 175 aa9.47□□□□□ -0.89
SHMT2-209ENST00000553949 I3L521 148 aa9.47□□□□□ -0.89
SHMT2-209ENST00000553949 L7N2F9 121 aa9.47□□□□□ -0.89
SHMT2-209ENST00000553949 TSC22D2O75157 780 aa9.47□□□□□ -0.89
SHMT2-209ENST00000553949 MT-CO2P00403 227 aa9.47□□□□□ -0.89
SHMT2-209ENST00000553949 IGHV3-23P01764 117 aa9.47□□□□□ -0.89
SHMT2-209ENST00000553949 PVALBP20472 110 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-209ENST00000553949 VAMP2P63027 116 aa9.47□□□□□ -0.89
SHMT2-209ENST00000553949 RUNX1Q01196 453 aa9.47□□□□□ -0.89
SHMT2-209ENST00000553949 ZNF343Q6P1L6 599 aa9.47□□□□□ -0.89
SHMT2-209ENST00000553949 RNASEH2CQ8TDP1 164 aaKnown RBP9.47□□□□□ -0.89
SHMT2-209ENST00000553949 VN1R17PQ8TDU5 208 aa9.47□□□□□ -0.89
SHMT2-209ENST00000553949 SCARB1Q8WTV0 552 aa9.47□□□□□ -0.89
SHMT2-209ENST00000553949 EEF1AKMT3Q96AZ1 226 aa9.47□□□□□ -0.89
SHMT2-209ENST00000553949 C11orf1Q9H5F2 150 aa9.47□□□□□ -0.89
SHMT2-209ENST00000553949 PAIP2BQ9ULR5 123 aaKnown RBP9.47□□□□□ -0.89
SHMT2-209ENST00000553949 STRAPQ9Y3F4 350 aaKnown RBP9.47□□□□□ -0.89
SHMT2-209ENST00000553949 STAB1Q9NY15 2570 aa9.46□□□□□ -0.89
SHMT2-209ENST00000553949 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.46□□□□□ -0.9
SHMT2-209ENST00000553949 TRBV7-1A0A0A6YYK4 115 aa9.46□□□□□ -0.9
SHMT2-209ENST00000553949 DEDDO75618 318 aa9.46□□□□□ -0.9
SHMT2-209ENST00000553949 IFNA4P05014 189 aa9.46□□□□□ -0.9
SHMT2-209ENST00000553949 GIPP09681 153 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-209ENST00000553949 OR8U8P0C7N1 319 aa9.46□□□□□ -0.9
SHMT2-209ENST00000553949 OPRK1P41145 380 aa9.46□□□□□ -0.9
SHMT2-209ENST00000553949 RAB11AP62491 216 aa9.46□□□□□ -0.9
SHMT2-209ENST00000553949 DEFB136Q30KP8 78 aa9.46□□□□□ -0.9
SHMT2-209ENST00000553949 ZNF502Q8TBZ5 544 aa9.46□□□□□ -0.9
SHMT2-209ENST00000553949 ASB13Q8WXK3 278 aa9.46□□□□□ -0.9
SHMT2-209ENST00000553949 CCDC140Q96MF4 163 aa9.46□□□□□ -0.9
SHMT2-209ENST00000553949 C21orf62Q9NYP8 219 aa9.46□□□□□ -0.9
SHMT2-209ENST00000553949 RPS10-NUDT3A0A1W2PQS6 291 aa9.45□□□□□ -0.9
SHMT2-209ENST00000553949 ANKRD34BA5PLL1 514 aa9.45□□□□□ -0.9
SHMT2-209ENST00000553949 H0YIZ8 118 aa9.45□□□□□ -0.9
SHMT2-209ENST00000553949 M0QZ24 198 aa9.45□□□□□ -0.9
SHMT2-209ENST00000553949 MPC2O95563 127 aa9.45□□□□□ -0.9
SHMT2-209ENST00000553949 IGHV3-48P01763 117 aa9.45□□□□□ -0.9
SHMT2-209ENST00000553949 RLN2P04090 185 aa9.45□□□□□ -0.9
SHMT2-209ENST00000553949 BCAP31P51572 246 aa9.45□□□□□ -0.9
SHMT2-209ENST00000553949 MLANAQ16655 118 aa9.45□□□□□ -0.9
SHMT2-209ENST00000553949 FAM209BQ5JX69 171 aa9.45□□□□□ -0.9
SHMT2-209ENST00000553949 TMEM14EPQ6UXP3 125 aa9.45□□□□□ -0.9
SHMT2-209ENST00000553949 CLEC19AQ6UXS0 136 aa9.45□□□□□ -0.9
SHMT2-209ENST00000553949 ETV3LQ6ZN32 361 aa9.45□□□□□ -0.9
SHMT2-209ENST00000553949 OR4F17Q8NGA8 305 aa9.45□□□□□ -0.9
SHMT2-209ENST00000553949 OR1N2Q8NGR9 330 aa9.45□□□□□ -0.9
SHMT2-209ENST00000553949 CHAC2Q8WUX2 184 aa9.45□□□□□ -0.9
SHMT2-209ENST00000553949 RAX2Q96IS3 184 aa9.45□□□□□ -0.9
SHMT2-209ENST00000553949 OR4F4Q96R69 305 aa9.45□□□□□ -0.9
SHMT2-209ENST00000553949 FNDC4Q9H6D8 234 aaPredicted RBP9.45□□□□□ -0.9
SHMT2-209ENST00000553949 OR5AC2Q9NZP5 309 aa9.45□□□□□ -0.9
SHMT2-209ENST00000553949 PEF1Q9UBV8 284 aaKnown RBP9.45□□□□□ -0.9
SHMT2-209ENST00000553949 IGHV4OR15-8A0A075B7B6 117 aa9.44□□□□□ -0.9
SHMT2-209ENST00000553949 A0A087WW49 117 aa9.44□□□□□ -0.9
SHMT2-209ENST00000553949 E5RGE8 158 aa9.44□□□□□ -0.9
SHMT2-209ENST00000553949 F8W735 103 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-209ENST00000553949 CCL24O00175 119 aa9.44□□□□□ -0.9
SHMT2-209ENST00000553949 TRBV12-3P01733 135 aa9.44□□□□□ -0.9
SHMT2-209ENST00000553949 HSPB1P04792 205 aaKnown RBP9.44□□□□□ -0.9
SHMT2-209ENST00000553949 CLEC3BP05452 202 aa9.44□□□□□ -0.9
SHMT2-209ENST00000553949 PET100P0DJ07 73 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms