RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 RNASE11Q8TAA1 199 aaKnown RBP13.28□□□□□ -0.28
FOXN3-204ENST00000553840 RRNAD1Q96FB5 475 aaKnown RBP13.28□□□□□ -0.28
FOXN3-204ENST00000553840 TP53RKQ96S44 253 aa13.28□□□□□ -0.28
FOXN3-204ENST00000553840 C14orf166Q9Y224 244 aaKnown RBP13.28□□□□□ -0.28
FOXN3-204ENST00000553840 NBEAL2Q6ZNJ1 2754 aa13.27□□□□□ -0.28
FOXN3-204ENST00000553840 C15orf62A8K5M9 175 aa13.27□□□□□ -0.29
FOXN3-204ENST00000553840 DISC1C4P0D8 188 aa13.27□□□□□ -0.29
FOXN3-204ENST00000553840 IFNA17P01571 189 aa13.27□□□□□ -0.29
FOXN3-204ENST00000553840 CTSDP07339 412 aaPredicted RBP13.27□□□□□ -0.29
FOXN3-204ENST00000553840 FCGR2BP31994 310 aaPredicted RBP13.27□□□□□ -0.29
FOXN3-204ENST00000553840 ADMP35318 185 aa13.27□□□□□ -0.29
FOXN3-204ENST00000553840 SUB1P53999 127 aaKnown RBP eCLIP13.27□□□□□ -0.29
FOXN3-204ENST00000553840 OR13C8Q8NGS7 320 aa13.27□□□□□ -0.29
FOXN3-204ENST00000553840 IL17DQ8TAD2 202 aa13.27□□□□□ -0.29
FOXN3-204ENST00000553840 MARCH1Q8TCQ1 289 aa13.27□□□□□ -0.29
FOXN3-204ENST00000553840 SMIM4Q8WVI0 70 aa13.27□□□□□ -0.29
FOXN3-204ENST00000553840 PINX1Q96BK5 328 aaKnown RBP13.27□□□□□ -0.29
FOXN3-204ENST00000553840 F8W735 103 aaPredicted RBP13.26□□□□□ -0.29
FOXN3-204ENST00000553840 I3L2K1 104 aa13.26□□□□□ -0.29
FOXN3-204ENST00000553840 TSPAN4O14817 238 aa13.26□□□□□ -0.29
FOXN3-204ENST00000553840 GNG7O60262 68 aa13.26□□□□□ -0.29
FOXN3-204ENST00000553840 MT-CO2P00403 227 aa13.26□□□□□ -0.29
FOXN3-204ENST00000553840 IGKV1-5P01602 117 aa13.26□□□□□ -0.29
FOXN3-204ENST00000553840 CTSGP08311 255 aa13.26□□□□□ -0.29
FOXN3-204ENST00000553840 TNFSF8P32971 234 aa13.26□□□□□ -0.29
FOXN3-204ENST00000553840 GGTLC1Q9BX51 225 aa13.26□□□□□ -0.29
FOXN3-204ENST00000553840 ENY2Q9NPA8 101 aa13.26□□□□□ -0.29
FOXN3-204ENST00000553840 HUWE1Q7Z6Z7 4374 aaKnown RBP13.25□□□□□ -0.29
FOXN3-204ENST00000553840 LOC102724200A0A096LPH7 203 aaPredicted RBP13.25□□□□□ -0.29
FOXN3-204ENST00000553840 FABP12A6NFH5 140 aa13.25□□□□□ -0.29
FOXN3-204ENST00000553840 CORTO00230 105 aa13.25□□□□□ -0.29
FOXN3-204ENST00000553840 CTDSPLO15194 276 aa13.25□□□□□ -0.29
FOXN3-204ENST00000553840 YIF1AO95070 293 aa13.25□□□□□ -0.29
FOXN3-204ENST00000553840 AKAIN1P0CW23 69 aa13.25□□□□□ -0.29
FOXN3-204ENST00000553840 UCP1P25874 307 aa13.25□□□□□ -0.29
FOXN3-204ENST00000553840 S100A5P33763 92 aa13.25□□□□□ -0.29
FOXN3-204ENST00000553840 SURF2Q15527 256 aaPredicted RBP13.25□□□□□ -0.29
FOXN3-204ENST00000553840 IZUMO4Q1ZYL8 232 aa13.25□□□□□ -0.29
FOXN3-204ENST00000553840 SP6Q3SY56 376 aa13.25□□□□□ -0.29
FOXN3-204ENST00000553840 ZFAND6Q6FIF0 208 aa13.25□□□□□ -0.29
FOXN3-204ENST00000553840 DUSP18Q8NEJ0 188 aa13.25□□□□□ -0.29
FOXN3-204ENST00000553840 RETNQ9HD89 108 aa13.25□□□□□ -0.29
FOXN3-204ENST00000553840 IGHV3OR16-8A0A075B7F1 116 aa13.24□□□□□ -0.29
FOXN3-204ENST00000553840 A0A0B4J293 547 aa13.24□□□□□ -0.29
FOXN3-204ENST00000553840 TEX13DA0A0J9YY54 714 aaPredicted RBP13.24□□□□□ -0.29
FOXN3-204ENST00000553840 OR4C46A6NHA9 309 aa13.24□□□□□ -0.29
FOXN3-204ENST00000553840 ST8SIA3O43173 380 aa13.24□□□□□ -0.29
FOXN3-204ENST00000553840 ZNF207O43670 478 aaKnown RBP13.24□□□□□ -0.29
FOXN3-204ENST00000553840 NPBWR1P48145 328 aa13.24□□□□□ -0.29
FOXN3-204ENST00000553840 HOXA1P49639 335 aaPredicted RBP13.24□□□□□ -0.29
FOXN3-204ENST00000553840 SPINK9Q5DT21 86 aa13.24□□□□□ -0.29
FOXN3-204ENST00000553840 FAM219AQ8IW50 185 aa13.24□□□□□ -0.29
FOXN3-204ENST00000553840 PRRT1Q99946 306 aa13.24□□□□□ -0.29
FOXN3-204ENST00000553840 FAM110AQ9BQ89 295 aa13.24□□□□□ -0.29
FOXN3-204ENST00000553840 INS-IGF2F8WCM5 200 aa13.23□□□□□ -0.29
FOXN3-204ENST00000553840 P0C879 139 aa13.23□□□□□ -0.29
FOXN3-204ENST00000553840 BMI1P35226 326 aa13.23□□□□□ -0.29
FOXN3-204ENST00000553840 DHODHQ02127 395 aa13.23□□□□□ -0.29
FOXN3-204ENST00000553840 TMEM116Q8NCL8 245 aa13.23□□□□□ -0.29
FOXN3-204ENST00000553840 GINS3Q9BRX5 216 aa13.23□□□□□ -0.29
FOXN3-204ENST00000553840 TMEM222Q9H0R3 208 aa13.23□□□□□ -0.29
FOXN3-204ENST00000553840 SMPXQ9UHP9 88 aa13.23□□□□□ -0.29
FOXN3-204ENST00000553840 KMT2CQ8NEZ4 4911 aaKnown RBP13.22□□□□□ -0.29
FOXN3-204ENST00000553840 TRAV14DV4A0A0A6YYC5 116 aa13.22□□□□□ -0.29
FOXN3-204ENST00000553840 IGHV7-4-1A0A0J9YVY3 117 aa13.22□□□□□ -0.29
FOXN3-204ENST00000553840 SCGB2A1O75556 95 aa13.22□□□□□ -0.29
FOXN3-204ENST00000553840 CDS2O95674 445 aa13.22□□□□□ -0.29
FOXN3-204ENST00000553840 IGHV3-48P01763 117 aa13.22□□□□□ -0.29
FOXN3-204ENST00000553840 OR5AC1P0C628 307 aa13.22□□□□□ -0.29
FOXN3-204ENST00000553840 ETV6P41212 452 aa13.22□□□□□ -0.29
FOXN3-204ENST00000553840 FAAP20Q6NZ36 180 aa13.22□□□□□ -0.29
FOXN3-204ENST00000553840 OR10C1Q96KK4 312 aa13.22□□□□□ -0.29
FOXN3-204ENST00000553840 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.22□□□□□ -0.29
FOXN3-204ENST00000553840 APOC4P55056 127 aa13.21□□□□□ -0.29
FOXN3-204ENST00000553840 CMC4P56277 68 aaPredicted RBP13.21□□□□□ -0.29
FOXN3-204ENST00000553840 OR4C16Q8NGL9 310 aa13.21□□□□□ -0.29
FOXN3-204ENST00000553840 RBPMSQ93062 196 aaKnown RBP13.21□□□□□ -0.29
FOXN3-204ENST00000553840 SCGB3A2Q96PL1 93 aa13.21□□□□□ -0.29
FOXN3-204ENST00000553840 SOSTQ9BQB4 213 aa13.21□□□□□ -0.29
FOXN3-204ENST00000553840 RTBDNQ9BSG5 229 aaPredicted RBP13.21□□□□□ -0.29
FOXN3-204ENST00000553840 RHPN1-AS1Q9BWJ2 59 aa13.21□□□□□ -0.29
FOXN3-204ENST00000553840 NAA60Q9H7X0 242 aa13.21□□□□□ -0.29
FOXN3-204ENST00000553840 UBQLN2Q9UHD9 624 aa13.21□□□□□ -0.29
FOXN3-204ENST00000553840 SCP2D1Q9UJQ7 156 aa13.21□□□□□ -0.29
FOXN3-204ENST00000553840 CHEK1O14757 476 aa13.2□□□□□ -0.3
FOXN3-204ENST00000553840 CD5P06127 495 aa13.2□□□□□ -0.3
FOXN3-204ENST00000553840 PYDC2Q56P42 97 aa13.2□□□□□ -0.3
FOXN3-204ENST00000553840 GLYATL2Q8WU03 294 aa13.2□□□□□ -0.3
FOXN3-204ENST00000553840 CACFD1Q9UGQ2 172 aa13.2□□□□□ -0.3
FOXN3-204ENST00000553840 GPR132Q9UNW8 380 aa13.2□□□□□ -0.3
FOXN3-204ENST00000553840 KCNIP3Q9Y2W7 256 aa13.2□□□□□ -0.3
FOXN3-204ENST00000553840 A0A0G2JRQ6 117 aa13.19□□□□□ -0.3
FOXN3-204ENST00000553840 A6NHS1 94 aa13.19□□□□□ -0.3
FOXN3-204ENST00000553840 GSTZ1O43708 216 aaPredicted RBP13.19□□□□□ -0.3
FOXN3-204ENST00000553840 RNASE2P10153 161 aaKnown RBP13.19□□□□□ -0.3
FOXN3-204ENST00000553840 OPRK1P41145 380 aa13.19□□□□□ -0.3
FOXN3-204ENST00000553840 SPCS3P61009 180 aa13.19□□□□□ -0.3
FOXN3-204ENST00000553840 ZNF600Q6ZNG1 722 aa13.19□□□□□ -0.3
FOXN3-204ENST00000553840 OR51S1Q8NGJ8 323 aa13.19□□□□□ -0.3
FOXN3-204ENST00000553840 OR52E5Q8NH55 327 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms