RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 KIAA2026Q5HYC2 2103 aa12.72□□□□□ -0.37
ACTN1-209ENST00000553659 OR8G2PQ6IF36 304 aa12.72□□□□□ -0.37
ACTN1-209ENST00000553659 CENPVQ7Z7K6 275 aaPredicted RBP12.72□□□□□ -0.37
ACTN1-209ENST00000553659 HAPLN4Q86UW8 402 aa12.72□□□□□ -0.37
ACTN1-209ENST00000553659 THNSL2Q86YJ6 484 aa12.72□□□□□ -0.37
ACTN1-209ENST00000553659 TGIF2LXQ8IUE1 241 aa12.72□□□□□ -0.37
ACTN1-209ENST00000553659 C11orf42Q8N5U0 333 aa12.72□□□□□ -0.37
ACTN1-209ENST00000553659 OR5B3Q8NH48 314 aa12.72□□□□□ -0.37
ACTN1-209ENST00000553659 FLYWCH2Q96CP2 140 aaKnown RBP12.72□□□□□ -0.37
ACTN1-209ENST00000553659 RBMXL1Q96E39 390 aaKnown RBP12.72□□□□□ -0.37
ACTN1-209ENST00000553659 NABP2Q9BQ15 211 aa12.72□□□□□ -0.37
ACTN1-209ENST00000553659 CLEC7AQ9BXN2 247 aa12.72□□□□□ -0.37
ACTN1-209ENST00000553659 MRPL20Q9BYC9 149 aaKnown RBP12.72□□□□□ -0.37
ACTN1-209ENST00000553659 HEYLQ9NQ87 328 aaPredicted RBP12.72□□□□□ -0.37
ACTN1-209ENST00000553659 WASHC3Q9Y3C0 194 aa12.72□□□□□ -0.37
ACTN1-209ENST00000553659 FBXO7Q9Y3I1 522 aa12.72□□□□□ -0.37
ACTN1-209ENST00000553659 PMS2P5A8MQ11 134 aa12.71□□□□□ -0.37
ACTN1-209ENST00000553659 H2AFB1P0C5Y9 115 aa12.71□□□□□ -0.37
ACTN1-209ENST00000553659 SNCAP37840 140 aa12.71□□□□□ -0.37
ACTN1-209ENST00000553659 LGALS7P47929 136 aa12.71□□□□□ -0.37
ACTN1-209ENST00000553659 LGALS4P56470 323 aa12.71□□□□□ -0.37
ACTN1-209ENST00000553659 ARL16Q0P5N6 197 aa12.71□□□□□ -0.37
ACTN1-209ENST00000553659 OXLD1Q5BKU9 147 aa12.71□□□□□ -0.37
ACTN1-209ENST00000553659 UTF1Q5T230 341 aa12.71□□□□□ -0.37
ACTN1-209ENST00000553659 SVBPQ8N300 66 aa12.71□□□□□ -0.37
ACTN1-209ENST00000553659 MRAPQ8TCY5 172 aa12.71□□□□□ -0.37
ACTN1-209ENST00000553659 ST6GALNAC6Q969X2 333 aa12.71□□□□□ -0.37
ACTN1-209ENST00000553659 SEC11CQ9BY50 192 aa12.71□□□□□ -0.37
ACTN1-209ENST00000553659 KCNIP2Q9NS61 270 aa12.71□□□□□ -0.37
ACTN1-209ENST00000553659 SERTAD4Q9NUC0 356 aa12.71□□□□□ -0.37
ACTN1-209ENST00000553659 CARHSP1Q9Y2V2 147 aaKnown RBP12.71□□□□□ -0.37
ACTN1-209ENST00000553659 OR51B2Q9Y5P1 312 aa12.71□□□□□ -0.37
ACTN1-209ENST00000553659 IGHV2-26A0A0B4J1V2 119 aa12.7□□□□□ -0.38
ACTN1-209ENST00000553659 TRAV1-1A0A0B4J248 108 aa12.7□□□□□ -0.38
ACTN1-209ENST00000553659 FNDC10F2Z333 226 aa12.7□□□□□ -0.38
ACTN1-209ENST00000553659 H7C2Y5 167 aa12.7□□□□□ -0.38
ACTN1-209ENST00000553659 KBTBD11O94819 623 aa12.7□□□□□ -0.38
ACTN1-209ENST00000553659 IFNA10P01566 189 aa12.7□□□□□ -0.38
ACTN1-209ENST00000553659 CD5P06127 495 aa12.7□□□□□ -0.38
ACTN1-209ENST00000553659 DLK1P80370 383 aa12.7□□□□□ -0.38
ACTN1-209ENST00000553659 PRCDQ00LT1 54 aa12.7□□□□□ -0.38
ACTN1-209ENST00000553659 HLA-DRB5Q30154 266 aa12.7□□□□□ -0.38
ACTN1-209ENST00000553659 NSUN5P1Q3KNT7 163 aa12.7□□□□□ -0.38
ACTN1-209ENST00000553659 NDUFA11Q86Y39 141 aa12.7□□□□□ -0.38
ACTN1-209ENST00000553659 MRPL41Q8IXM3 137 aaKnown RBP12.7□□□□□ -0.38
ACTN1-209ENST00000553659 Q8N2B8 174 aa12.7□□□□□ -0.38
ACTN1-209ENST00000553659 ZNF709Q8N972 641 aa12.7□□□□□ -0.38
ACTN1-209ENST00000553659 HARBI1Q96MB7 349 aa12.7□□□□□ -0.38
ACTN1-209ENST00000553659 ZNF702PQ9H963 129 aa12.7□□□□□ -0.38
ACTN1-209ENST00000553659 PLEKHA3Q9HB20 300 aa12.7□□□□□ -0.38
ACTN1-209ENST00000553659 UBE2L5PA0A1B0GUS4 154 aa12.69□□□□□ -0.38
ACTN1-209ENST00000553659 A0A1W2PN81 502 aa12.69□□□□□ -0.38
ACTN1-209ENST00000553659 C15orf62A8K5M9 175 aa12.69□□□□□ -0.38
ACTN1-209ENST00000553659 F8W036 122 aa12.69□□□□□ -0.38
ACTN1-209ENST00000553659 INS-IGF2F8WCM5 200 aa12.69□□□□□ -0.38
ACTN1-209ENST00000553659 APOC3P02656 99 aa12.69□□□□□ -0.38
ACTN1-209ENST00000553659 CD28P10747 220 aa12.69□□□□□ -0.38
ACTN1-209ENST00000553659 CHRNA7P36544 502 aa12.69□□□□□ -0.38
ACTN1-209ENST00000553659 RUNX1Q01196 453 aa12.69□□□□□ -0.38
ACTN1-209ENST00000553659 VMA21Q3ZAQ7 101 aa12.69□□□□□ -0.38
ACTN1-209ENST00000553659 TMEM41BQ5BJD5 291 aa12.69□□□□□ -0.38
ACTN1-209ENST00000553659 C10orf91Q5T1B1 145 aa12.69□□□□□ -0.38
ACTN1-209ENST00000553659 VKORC1L1Q8N0U8 176 aa12.69□□□□□ -0.38
ACTN1-209ENST00000553659 KIAA1456Q9P272 454 aa12.69□□□□□ -0.38
ACTN1-209ENST00000553659 IGLV1-47P01700 117 aa12.68□□□□□ -0.38
ACTN1-209ENST00000553659 COX7A1P24310 79 aa12.68□□□□□ -0.38
ACTN1-209ENST00000553659 HABP2Q14520 560 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-209ENST00000553659 GUK1Q16774 197 aa12.68□□□□□ -0.38
ACTN1-209ENST00000553659 ETV3LQ6ZN32 361 aa12.68□□□□□ -0.38
ACTN1-209ENST00000553659 LHFPL4Q7Z7J7 247 aa12.68□□□□□ -0.38
ACTN1-209ENST00000553659 SLC24A4Q8NFF2 622 aa12.68□□□□□ -0.38
ACTN1-209ENST00000553659 OR4F17Q8NGA8 305 aa12.68□□□□□ -0.38
ACTN1-209ENST00000553659 TMEM167AQ8TBQ9 72 aa12.68□□□□□ -0.38
ACTN1-209ENST00000553659 WIPF2Q8TF74 440 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-209ENST00000553659 OR4F4Q96R69 305 aa12.68□□□□□ -0.38
ACTN1-209ENST00000553659 RNF5Q99942 180 aa12.68□□□□□ -0.38
ACTN1-209ENST00000553659 IGKV1-16P04430 117 aa12.67□□□□□ -0.38
ACTN1-209ENST00000553659 SAA1P0DJI8 122 aaPredicted RBP12.67□□□□□ -0.38
ACTN1-209ENST00000553659 FGF7P21781 194 aa12.67□□□□□ -0.38
ACTN1-209ENST00000553659 NPY1RP25929 384 aa12.67□□□□□ -0.38
ACTN1-209ENST00000553659 DYNAPQ8N1N2 210 aa12.67□□□□□ -0.38
ACTN1-209ENST00000553659 OR1L8Q8NGR8 309 aa12.67□□□□□ -0.38
ACTN1-209ENST00000553659 MBD3L1Q8WWY6 194 aa12.67□□□□□ -0.38
ACTN1-209ENST00000553659 MALSU1Q96EH3 234 aa12.67□□□□□ -0.38
ACTN1-209ENST00000553659 CITED2Q99967 270 aaPredicted RBP12.67□□□□□ -0.38
ACTN1-209ENST00000553659 COMMD5Q9GZQ3 224 aa12.67□□□□□ -0.38
ACTN1-209ENST00000553659 AURKAIP1Q9NWT8 199 aaPredicted RBP12.67□□□□□ -0.38
ACTN1-209ENST00000553659 TBL2Q9Y4P3 447 aaKnown RBP12.67□□□□□ -0.38
ACTN1-209ENST00000553659 TRAV3A0A0B4J244 114 aa12.66□□□□□ -0.38
ACTN1-209ENST00000553659 A6NDX4 124 aa12.66□□□□□ -0.38
ACTN1-209ENST00000553659 ADARB2-AS1A8MUL3 147 aa12.66□□□□□ -0.38
ACTN1-209ENST00000553659 SNAPINO95295 136 aa12.66□□□□□ -0.38
ACTN1-209ENST00000553659 CD1BP29016 333 aa12.66□□□□□ -0.38
ACTN1-209ENST00000553659 CEACAM3P40198 252 aa12.66□□□□□ -0.38
ACTN1-209ENST00000553659 FHITP49789 147 aa12.66□□□□□ -0.38
ACTN1-209ENST00000553659 RPS16P62249 146 aaKnown RBP12.66□□□□□ -0.38
ACTN1-209ENST00000553659 RPL8P62917 257 aaKnown RBP12.66□□□□□ -0.38
ACTN1-209ENST00000553659 DEFA5Q01523 94 aa12.66□□□□□ -0.38
ACTN1-209ENST00000553659 TEX45Q8NA69 505 aa12.66□□□□□ -0.38
ACTN1-209ENST00000553659 RSG1Q9BU20 258 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms