RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 POLR2GP62487 172 aaKnown RBP eCLIP13.37□□□□□ -0.27
ITGA5-213ENST00000553071 VAMP2P63027 116 aa13.37□□□□□ -0.27
ITGA5-213ENST00000553071 PVRIGQ6DKI7 326 aa13.37□□□□□ -0.27
ITGA5-213ENST00000553071 ETFRF1Q6IPR1 90 aa13.37□□□□□ -0.27
ITGA5-213ENST00000553071 KLHL30-AS1Q8NEE0 82 aa13.37□□□□□ -0.27
ITGA5-213ENST00000553071 MAGT1Q9H0U3 335 aa13.37□□□□□ -0.27
ITGA5-213ENST00000553071 LGALS1P09382 135 aaKnown RBP13.36□□□□□ -0.27
ITGA5-213ENST00000553071 SRSF4Q08170 494 aaKnown RBP13.36□□□□□ -0.27
ITGA5-213ENST00000553071 IL15RAQ13261 267 aa13.36□□□□□ -0.27
ITGA5-213ENST00000553071 NSUN5P1Q3KNT7 163 aa13.36□□□□□ -0.27
ITGA5-213ENST00000553071 ZNF343Q6P1L6 599 aa13.36□□□□□ -0.27
ITGA5-213ENST00000553071 LCNL1Q6ZST4 164 aa13.36□□□□□ -0.27
ITGA5-213ENST00000553071 MISP3Q96FF7 219 aa13.36□□□□□ -0.27
ITGA5-213ENST00000553071 RANGRFQ9HD47 186 aaPredicted RBP13.36□□□□□ -0.27
ITGA5-213ENST00000553071 STRAPQ9Y3F4 350 aaKnown RBP13.36□□□□□ -0.27
ITGA5-213ENST00000553071 SSSCA1O60232 199 aa13.35□□□□□ -0.27
ITGA5-213ENST00000553071 TSC22D2O75157 780 aa13.35□□□□□ -0.27
ITGA5-213ENST00000553071 SCGB2A1O75556 95 aa13.35□□□□□ -0.27
ITGA5-213ENST00000553071 NDUFB8O95169 186 aa13.35□□□□□ -0.27
ITGA5-213ENST00000553071 SIX6O95475 246 aa13.35□□□□□ -0.27
ITGA5-213ENST00000553071 IFNA4P05014 189 aa13.35□□□□□ -0.27
ITGA5-213ENST00000553071 IAPPP10997 89 aa13.35□□□□□ -0.27
ITGA5-213ENST00000553071 TXN2Q99757 166 aa13.35□□□□□ -0.27
ITGA5-213ENST00000553071 PSENENQ9NZ42 101 aa13.35□□□□□ -0.27
ITGA5-213ENST00000553071 TET2Q6N021 2002 aaPredicted RBP13.35□□□□□ -0.27
ITGA5-213ENST00000553071 A0A1W2PRX2 142 aa13.34□□□□□ -0.27
ITGA5-213ENST00000553071 I3L521 148 aa13.34□□□□□ -0.27
ITGA5-213ENST00000553071 K7EPK0 472 aa13.34□□□□□ -0.27
ITGA5-213ENST00000553071 HSPB1P04792 205 aaKnown RBP13.34□□□□□ -0.27
ITGA5-213ENST00000553071 OR8U8P0C7N1 319 aa13.34□□□□□ -0.27
ITGA5-213ENST00000553071 SLC25A4P12235 298 aa13.34□□□□□ -0.27
ITGA5-213ENST00000553071 MYCNOSP40205 109 aa13.34□□□□□ -0.27
ITGA5-213ENST00000553071 MFAP2P55001 183 aa13.34□□□□□ -0.27
ITGA5-213ENST00000553071 MFAP4P55083 255 aa13.34□□□□□ -0.27
ITGA5-213ENST00000553071 H2BFSP57053 126 aa13.34□□□□□ -0.27
ITGA5-213ENST00000553071 S100A10P60903 97 aa13.34□□□□□ -0.27
ITGA5-213ENST00000553071 FCN2Q15485 313 aa13.34□□□□□ -0.27
ITGA5-213ENST00000553071 SPANXN5Q5MJ07 72 aa13.34□□□□□ -0.27
ITGA5-213ENST00000553071 CACNG8Q8WXS5 425 aa13.34□□□□□ -0.27
ITGA5-213ENST00000553071 DPF1Q92782 380 aa13.34□□□□□ -0.27
ITGA5-213ENST00000553071 C21orf62Q9NYP8 219 aa13.34□□□□□ -0.27
ITGA5-213ENST00000553071 PEF1Q9UBV8 284 aaKnown RBP13.34□□□□□ -0.27
ITGA5-213ENST00000553071 LSM5Q9Y4Y9 91 aaKnown RBP13.34□□□□□ -0.27
ITGA5-213ENST00000553071 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.33□□□□□ -0.28
ITGA5-213ENST00000553071 MT-CO2P00403 227 aa13.33□□□□□ -0.28
ITGA5-213ENST00000553071 IGHV3-11P01762 117 aa13.33□□□□□ -0.28
ITGA5-213ENST00000553071 ZP3P21754 424 aa13.33□□□□□ -0.28
ITGA5-213ENST00000553071 GPX4P36969 197 aaPredicted RBP13.33□□□□□ -0.28
ITGA5-213ENST00000553071 OPRK1P41145 380 aa13.33□□□□□ -0.28
ITGA5-213ENST00000553071 NPBWR1P48145 328 aa13.33□□□□□ -0.28
ITGA5-213ENST00000553071 FGL1Q08830 312 aa13.33□□□□□ -0.28
ITGA5-213ENST00000553071 RAB32Q13637 225 aa13.33□□□□□ -0.28
ITGA5-213ENST00000553071 Q6ZNX1 250 aa13.33□□□□□ -0.28
ITGA5-213ENST00000553071 C19orf35Q6ZS72 473 aa13.33□□□□□ -0.28
ITGA5-213ENST00000553071 SCARB1Q8WTV0 552 aa13.33□□□□□ -0.28
ITGA5-213ENST00000553071 PINX1Q96BK5 328 aaKnown RBP13.33□□□□□ -0.28
ITGA5-213ENST00000553071 ZNF436Q9C0F3 470 aaPredicted RBP13.33□□□□□ -0.28
ITGA5-213ENST00000553071 GNB4Q9HAV0 340 aa13.33□□□□□ -0.28
ITGA5-213ENST00000553071 DMRT1Q9Y5R6 373 aa13.33□□□□□ -0.28
ITGA5-213ENST00000553071 STAB1Q9NY15 2570 aa13.33□□□□□ -0.28
ITGA5-213ENST00000553071 ADARB2-AS1A8MUL3 147 aa13.32□□□□□ -0.28
ITGA5-213ENST00000553071 E5RGE8 158 aa13.32□□□□□ -0.28
ITGA5-213ENST00000553071 I3L2K1 104 aa13.32□□□□□ -0.28
ITGA5-213ENST00000553071 K7EIM0 57 aa13.32□□□□□ -0.28
ITGA5-213ENST00000553071 GIPP09681 153 aaPredicted RBP13.32□□□□□ -0.28
ITGA5-213ENST00000553071 FCGR2BP31994 310 aaPredicted RBP13.32□□□□□ -0.28
ITGA5-213ENST00000553071 SPSB3Q6PJ21 355 aa13.32□□□□□ -0.28
ITGA5-213ENST00000553071 ETV3LQ6ZN32 361 aa13.32□□□□□ -0.28
ITGA5-213ENST00000553071 C8orf86Q6ZUL3 223 aa13.32□□□□□ -0.28
ITGA5-213ENST00000553071 OR1N2Q8NGR9 330 aa13.32□□□□□ -0.28
ITGA5-213ENST00000553071 ZNF502Q8TBZ5 544 aa13.32□□□□□ -0.28
ITGA5-213ENST00000553071 PPP1R1CQ8WVI7 109 aa13.32□□□□□ -0.28
ITGA5-213ENST00000553071 PAIP2BQ9ULR5 123 aaKnown RBP13.32□□□□□ -0.28
ITGA5-213ENST00000553071 RCL1Q9Y2P8 373 aaKnown RBP13.32□□□□□ -0.28
ITGA5-213ENST00000553071 CCL24O00175 119 aa13.31□□□□□ -0.28
ITGA5-213ENST00000553071 DEDDO75618 318 aa13.31□□□□□ -0.28
ITGA5-213ENST00000553071 CXCL3P19876 107 aa13.31□□□□□ -0.28
ITGA5-213ENST00000553071 RAP2BP61225 183 aa13.31□□□□□ -0.28
ITGA5-213ENST00000553071 ZNF616Q08AN1 781 aa13.31□□□□□ -0.28
ITGA5-213ENST00000553071 OR11H1Q8NG94 326 aa13.31□□□□□ -0.28
ITGA5-213ENST00000553071 OR11H7Q8NGC8 314 aa13.31□□□□□ -0.28
ITGA5-213ENST00000553071 DCUN1D4Q92564 292 aa13.31□□□□□ -0.28
ITGA5-213ENST00000553071 OR5B12Q96R08 314 aa13.31□□□□□ -0.28
ITGA5-213ENST00000553071 TRAV30A0A087WSZ9 112 aa13.3□□□□□ -0.28
ITGA5-213ENST00000553071 C15orf62A8K5M9 175 aa13.3□□□□□ -0.28
ITGA5-213ENST00000553071 LINC01619G3V211 115 aa13.3□□□□□ -0.28
ITGA5-213ENST00000553071 PF4P02776 101 aa13.3□□□□□ -0.28
ITGA5-213ENST00000553071 CLEC3BP05452 202 aa13.3□□□□□ -0.28
ITGA5-213ENST00000553071 BCAP31P51572 246 aa13.3□□□□□ -0.28
ITGA5-213ENST00000553071 PAX9P55771 341 aa13.3□□□□□ -0.28
ITGA5-213ENST00000553071 ACSM6Q6P461 480 aa13.3□□□□□ -0.28
ITGA5-213ENST00000553071 OR10P1Q8NGE3 313 aa13.3□□□□□ -0.28
ITGA5-213ENST00000553071 THAP6Q8TBB0 222 aa13.3□□□□□ -0.28
ITGA5-213ENST00000553071 BSCL2Q96G97 398 aaPredicted RBP13.3□□□□□ -0.28
ITGA5-213ENST00000553071 SLC25A31Q9H0C2 315 aa13.3□□□□□ -0.28
ITGA5-213ENST00000553071 TENM1Q9UKZ4 2725 aa13.3□□□□□ -0.28
ITGA5-213ENST00000553071 ANKRD34BA5PLL1 514 aa13.29□□□□□ -0.28
ITGA5-213ENST00000553071 MFSD2BA6NFX1 497 aa13.29□□□□□ -0.28
ITGA5-213ENST00000553071 NUPL2O15504 423 aaKnown RBP13.29□□□□□ -0.28
ITGA5-213ENST00000553071 GGCTO75223 188 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms