RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 RPL8P62917 257 aaKnown RBP4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 FKBP1BP68106 108 aa4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 RPL24P83731 157 aaKnown RBP4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 CENPWQ5EE01 88 aa4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 Q6ZSN1 163 aa4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 OR52E5Q8NH55 327 aa4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 IL1F10Q8WWZ1 152 aa4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 DDB2Q92466 427 aa4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 AP1S3Q96PC3 154 aa4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 DGAT2Q96PD7 388 aa4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 NDFIP1Q9BT67 221 aa4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 ZNF747Q9BV97 191 aa4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 ZNF331Q9NQX6 463 aaPredicted RBP4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 PHPT1Q9NRX4 125 aaPredicted RBP4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 SS18L2Q9UHA2 77 aa4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 CCL26Q9Y258 94 aa4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 CYSLTR1Q9Y271 337 aa4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 SOX21Q9Y651 276 aaPredicted RBP4.31□□□□□ -1.72
LSM3P2-201ENST00000551246 hCG_38984A0A1B0GV85 526 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 A0A1W2PRE2 83 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 A1L4Q6 167 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 HELTA6NFD8 242 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 SRRM4A7MD48 611 aaKnown RBP4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 SLC31A1O15431 190 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 SPRY1O43609 319 aaPredicted RBP4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 LEPROTL1O95214 131 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 SMIM13P0DJ93 91 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 CT45A10P0DMU9 189 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 CYBAP13498 195 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 HLA-DRB4P13762 266 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 SRD5A1P18405 259 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 GABRG2P18507 467 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 FCGR2BP31994 310 aaPredicted RBP4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 BRWD1-AS2P59051 145 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 PLP2Q04941 152 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 AESQ08117 197 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 FOXI1Q12951 378 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 RUNX3Q13761 415 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 NNATQ16517 81 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 CEACAM16Q2WEN9 425 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 LGALS9BQ3B8N2 356 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 LGALS9CQ6DKI2 356 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 RHBDD2Q6NTF9 364 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 RNASEKQ6P5S7 137 aaKnown RBP4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 ACP7Q6ZNF0 438 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 Q6ZUT4 128 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 RD3Q7Z3Z2 195 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 OOSP2Q86WS3 158 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 SBSPONQ8IVN8 264 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 ABHD12Q8N2K0 398 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 FGFRL1Q8N441 504 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 MRPL43Q8N983 215 aaKnown RBP4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 ZBTB34Q8NCN2 500 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 NUP35Q8NFH5 326 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 TSTD1Q8NFU3 115 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 RERGQ96A58 199 aaPredicted RBP4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 HARBI1Q96MB7 349 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 MGST2Q99735 147 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 CITED2Q99967 270 aaPredicted RBP4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 C1QTNF5Q9BXJ0 243 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 MAP1LC3CQ9BXW4 147 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 RNASE7Q9H1E1 156 aaKnown RBP4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 TBC1D29Q9UFV1 150 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 ERRFI1Q9UJM3 462 aaPredicted RBP4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 HSPB8Q9UJY1 196 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 POLDIP2Q9Y2S7 368 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 HLA-DRB4X5D2U9 266 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 SNRNP200O75643 2136 aaKnown RBP4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 ATG2BQ96BY7 2078 aa4.3□□□□□ -1.72
LSM3P2-201ENST00000551246 ZNF816-ZNF321PA0A0X1KG74 233 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 KBTBD11-OT1A0A1B0GTJ5 212 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 SHISA9B4DS77 424 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 IGLL5B9A064 214 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 FNDC10F2Z333 226 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 F5H5K5 113 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 LINC01619G3V211 115 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 H0YIG0 161 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 MGST3O14880 152 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 NKX2-8O15522 239 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 TLX3O43711 291 aaPredicted RBP4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 KLF7O75840 302 aaPredicted RBP4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 MT-ATP8P03928 68 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 DEFA4P12838 97 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 GYPEP15421 78 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 CDAP32320 146 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 VDAC2P45880 294 aaPredicted RBP4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 GPR12P47775 334 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 XGP55808 180 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 TCL1AP56279 114 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 KRTAP10-2P60368 255 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 FGF12P61328 243 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 ARF1P84077 181 aaKnown RBP4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 ATP5G2Q06055 141 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 PAX8Q06710 450 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 FHL3Q13643 280 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 CDSNQ15517 529 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 TIGITQ495A1 244 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 LYSMD4Q5XG99 296 aa4.29□□□□□ -1.72
LSM3P2-201ENST00000551246 Q6Q795 121 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms