RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 TRBV7-1A0A0A6YYK4 115 aa12.49□□□□□ -0.41
CHMP1A-209ENST00000550872 RNASE2P10153 161 aaKnown RBP12.49□□□□□ -0.41
CHMP1A-209ENST00000550872 ZP3P21754 424 aa12.49□□□□□ -0.41
CHMP1A-209ENST00000550872 HOXD3P31249 432 aaPredicted RBP12.49□□□□□ -0.41
CHMP1A-209ENST00000550872 CLEC19AQ6UXS0 136 aa12.49□□□□□ -0.41
CHMP1A-209ENST00000550872 GPN1Q9HCN4 374 aaPredicted RBP12.49□□□□□ -0.41
CHMP1A-209ENST00000550872 VWFP04275 2813 aa12.49□□□□□ -0.41
CHMP1A-209ENST00000550872 MPTX1A8MV57 137 aa12.48□□□□□ -0.41
CHMP1A-209ENST00000550872 IGLL1P15814 213 aa12.48□□□□□ -0.41
CHMP1A-209ENST00000550872 HTR2BP41595 481 aa12.48□□□□□ -0.41
CHMP1A-209ENST00000550872 RPEL1Q2QD12 228 aa12.48□□□□□ -0.41
CHMP1A-209ENST00000550872 ZNF502Q8TBZ5 544 aa12.48□□□□□ -0.41
CHMP1A-209ENST00000550872 DTD1Q8TEA8 209 aa12.48□□□□□ -0.41
CHMP1A-209ENST00000550872 SCARB1Q8WTV0 552 aa12.48□□□□□ -0.41
CHMP1A-209ENST00000550872 DLX4Q92988 240 aaPredicted RBP12.48□□□□□ -0.41
CHMP1A-209ENST00000550872 PINX1Q96BK5 328 aaKnown RBP12.48□□□□□ -0.41
CHMP1A-209ENST00000550872 RCC1LQ96I51 464 aaKnown RBP12.48□□□□□ -0.41
CHMP1A-209ENST00000550872 CCDC140Q96MF4 163 aa12.48□□□□□ -0.41
CHMP1A-209ENST00000550872 MARVELD1Q9BSK0 173 aa12.48□□□□□ -0.41
CHMP1A-209ENST00000550872 FAM90A26D6RGX4 464 aa12.47□□□□□ -0.41
CHMP1A-209ENST00000550872 PPP5D1E7EU14 171 aa12.47□□□□□ -0.41
CHMP1A-209ENST00000550872 K7EIM0 57 aa12.47□□□□□ -0.41
CHMP1A-209ENST00000550872 BMPR1BO00238 502 aa12.47□□□□□ -0.41
CHMP1A-209ENST00000550872 OVOL1O14753 267 aa12.47□□□□□ -0.41
CHMP1A-209ENST00000550872 PRAF2O60831 178 aa12.47□□□□□ -0.41
CHMP1A-209ENST00000550872 MED6O75586 246 aa12.47□□□□□ -0.41
CHMP1A-209ENST00000550872 MT-CO2P00403 227 aa12.47□□□□□ -0.41
CHMP1A-209ENST00000550872 CLEC3BP05452 202 aa12.47□□□□□ -0.41
CHMP1A-209ENST00000550872 SPNP16150 400 aa12.47□□□□□ -0.41
CHMP1A-209ENST00000550872 ARL3P36405 182 aa12.47□□□□□ -0.41
CHMP1A-209ENST00000550872 BSXQ3C1V8 233 aa12.47□□□□□ -0.41
CHMP1A-209ENST00000550872 C11orf87Q6NUJ2 197 aa12.47□□□□□ -0.41
CHMP1A-209ENST00000550872 MCRIP2Q9BUT9 160 aaKnown RBP12.47□□□□□ -0.41
CHMP1A-209ENST00000550872 PALMDQ9NP74 551 aa12.47□□□□□ -0.41
CHMP1A-209ENST00000550872 C21orf62Q9NYP8 219 aa12.47□□□□□ -0.41
CHMP1A-209ENST00000550872 I3L2K1 104 aa12.46□□□□□ -0.41
CHMP1A-209ENST00000550872 CCSO14618 274 aa12.46□□□□□ -0.41
CHMP1A-209ENST00000550872 GGCTO75223 188 aaKnown RBP12.46□□□□□ -0.41
CHMP1A-209ENST00000550872 IFNA10P01566 189 aa12.46□□□□□ -0.41
CHMP1A-209ENST00000550872 TATDN3Q17R31 274 aa12.46□□□□□ -0.41
CHMP1A-209ENST00000550872 IAH1Q2TAA2 248 aaPredicted RBP12.46□□□□□ -0.41
CHMP1A-209ENST00000550872 OXLD1Q5BKU9 147 aa12.46□□□□□ -0.41
CHMP1A-209ENST00000550872 PVRIGQ6DKI7 326 aa12.46□□□□□ -0.41
CHMP1A-209ENST00000550872 SLC24A4Q8NFF2 622 aa12.46□□□□□ -0.41
CHMP1A-209ENST00000550872 OR10C1Q96KK4 312 aa12.46□□□□□ -0.41
CHMP1A-209ENST00000550872 MAGT1Q9H0U3 335 aa12.46□□□□□ -0.41
CHMP1A-209ENST00000550872 GSKIPQ9P0R6 139 aa12.46□□□□□ -0.41
CHMP1A-209ENST00000550872 C5orf51A6NDU8 294 aa12.45□□□□□ -0.42
CHMP1A-209ENST00000550872 FAM25EA8MYX2 175 aa12.45□□□□□ -0.42
CHMP1A-209ENST00000550872 G3V4G9 280 aa12.45□□□□□ -0.42
CHMP1A-209ENST00000550872 CORTO00230 105 aa12.45□□□□□ -0.42
CHMP1A-209ENST00000550872 SYNGR2O43760 224 aa12.45□□□□□ -0.42
CHMP1A-209ENST00000550872 OR2C1O95371 312 aa12.45□□□□□ -0.42
CHMP1A-209ENST00000550872 PTTG1O95997 202 aa12.45□□□□□ -0.42
CHMP1A-209ENST00000550872 IGHV3-48P01763 117 aa12.45□□□□□ -0.42
CHMP1A-209ENST00000550872 IAPPP10997 89 aa12.45□□□□□ -0.42
CHMP1A-209ENST00000550872 NPY1RP25929 384 aa12.45□□□□□ -0.42
CHMP1A-209ENST00000550872 GPR183P32249 361 aa12.45□□□□□ -0.42
CHMP1A-209ENST00000550872 NKX2-1P43699 371 aaPredicted RBP12.45□□□□□ -0.42
CHMP1A-209ENST00000550872 MFAP4P55083 255 aa12.45□□□□□ -0.42
CHMP1A-209ENST00000550872 DCTN2Q13561 401 aaKnown RBP12.45□□□□□ -0.42
CHMP1A-209ENST00000550872 KLF5Q13887 457 aaPredicted RBP12.45□□□□□ -0.42
CHMP1A-209ENST00000550872 C2orf83Q53S99 150 aa12.45□□□□□ -0.42
CHMP1A-209ENST00000550872 Q56UQ5 140 aa12.45□□□□□ -0.42
CHMP1A-209ENST00000550872 NOXA1Q86UR1 476 aa12.45□□□□□ -0.42
CHMP1A-209ENST00000550872 C1QL4Q86Z23 238 aa12.45□□□□□ -0.42
CHMP1A-209ENST00000550872 ZBTB8BQ8NAP8 495 aaPredicted RBP12.45□□□□□ -0.42
CHMP1A-209ENST00000550872 UBAC2Q8NBM4 344 aa12.45□□□□□ -0.42
CHMP1A-209ENST00000550872 OR4D5Q8NGN0 318 aa12.45□□□□□ -0.42
CHMP1A-209ENST00000550872 ZC4H2Q9NQZ6 224 aa12.45□□□□□ -0.42
CHMP1A-209ENST00000550872 U3KQ87 197 aa12.45□□□□□ -0.42
CHMP1A-209ENST00000550872 SNRPGP15A8MWD9 76 aa12.44□□□□□ -0.42
CHMP1A-209ENST00000550872 SEC14L6B5MCN3 397 aa12.44□□□□□ -0.42
CHMP1A-209ENST00000550872 WRBO00258 174 aa12.44□□□□□ -0.42
CHMP1A-209ENST00000550872 SYNJ2BPP57105 145 aa12.44□□□□□ -0.42
CHMP1A-209ENST00000550872 ID3Q02535 119 aa12.44□□□□□ -0.42
CHMP1A-209ENST00000550872 SAMD5Q5TGI4 173 aa12.44□□□□□ -0.42
CHMP1A-209ENST00000550872 CIB3Q96Q77 187 aaPredicted RBP12.44□□□□□ -0.42
CHMP1A-209ENST00000550872 GPR61Q9BZJ8 451 aa12.44□□□□□ -0.42
CHMP1A-209ENST00000550872 TGP01266 2768 aa12.44□□□□□ -0.42
CHMP1A-209ENST00000550872 OR2T8A6NH00 312 aa12.43□□□□□ -0.42
CHMP1A-209ENST00000550872 TGOLN2O43493 480 aa12.43□□□□□ -0.42
CHMP1A-209ENST00000550872 SCGB1D2O95969 90 aa12.43□□□□□ -0.42
CHMP1A-209ENST00000550872 OPRK1P41145 380 aa12.43□□□□□ -0.42
CHMP1A-209ENST00000550872 MLANAQ16655 118 aa12.43□□□□□ -0.42
CHMP1A-209ENST00000550872 C9orf66Q5T8R8 295 aa12.43□□□□□ -0.42
CHMP1A-209ENST00000550872 ACSM6Q6P461 480 aa12.43□□□□□ -0.42
CHMP1A-209ENST00000550872 TMEM170AQ8WVE7 144 aa12.43□□□□□ -0.42
CHMP1A-209ENST00000550872 ATP6V0BQ99437 205 aa12.43□□□□□ -0.42
CHMP1A-209ENST00000550872 TXN2Q99757 166 aa12.43□□□□□ -0.42
CHMP1A-209ENST00000550872 GAR1Q9NY12 217 aaKnown RBP12.43□□□□□ -0.42
CHMP1A-209ENST00000550872 RPS10-NUDT3A0A1W2PQS6 291 aa12.42□□□□□ -0.42
CHMP1A-209ENST00000550872 ATP5IP56385 69 aaPredicted RBP12.42□□□□□ -0.42
CHMP1A-209ENST00000550872 POLR2GP62487 172 aaKnown RBP eCLIP12.42□□□□□ -0.42
CHMP1A-209ENST00000550872 GSG1LQ6UXU4 331 aa12.42□□□□□ -0.42
CHMP1A-209ENST00000550872 RNASEH2CQ8TDP1 164 aaKnown RBP12.42□□□□□ -0.42
CHMP1A-209ENST00000550872 BSCL2Q96G97 398 aaPredicted RBP12.42□□□□□ -0.42
CHMP1A-209ENST00000550872 ELOVL1Q9BW60 279 aa12.42□□□□□ -0.42
CHMP1A-209ENST00000550872 FNDC4Q9H6D8 234 aaPredicted RBP12.42□□□□□ -0.42
CHMP1A-209ENST00000550872 PAIP2BQ9ULR5 123 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms