RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 WFDC3Q8IUB2 231 aa8.11□□□□□ -1.11
VTI1BP3-201ENST00000550220 STPG3Q8N7X2 389 aa8.11□□□□□ -1.11
VTI1BP3-201ENST00000550220 TMEM229BQ8NBD8 167 aa8.11□□□□□ -1.11
VTI1BP3-201ENST00000550220 TMEM116Q8NCL8 245 aa8.11□□□□□ -1.11
VTI1BP3-201ENST00000550220 RRNAD1Q96FB5 475 aaKnown RBP8.11□□□□□ -1.11
VTI1BP3-201ENST00000550220 OR10C1Q96KK4 312 aa8.11□□□□□ -1.11
VTI1BP3-201ENST00000550220 OVOL2Q9BRP0 275 aa8.11□□□□□ -1.11
VTI1BP3-201ENST00000550220 GINS3Q9BRX5 216 aa8.11□□□□□ -1.11
VTI1BP3-201ENST00000550220 NXF2Q9GZY0 626 aaKnown RBP8.11□□□□□ -1.11
VTI1BP3-201ENST00000550220 ENY2Q9NPA8 101 aa8.11□□□□□ -1.11
VTI1BP3-201ENST00000550220 CACFD1Q9UGQ2 172 aa8.11□□□□□ -1.11
VTI1BP3-201ENST00000550220 IGHV7-4-1A0A0J9YVY3 117 aa8.1□□□□□ -1.11
VTI1BP3-201ENST00000550220 C3orf85A0A1B0GTC6 90 aa8.1□□□□□ -1.11
VTI1BP3-201ENST00000550220 SPRY2O43597 315 aa8.1□□□□□ -1.11
VTI1BP3-201ENST00000550220 IFNA17P01571 189 aa8.1□□□□□ -1.11
VTI1BP3-201ENST00000550220 IGKV1-39P01597 117 aa8.1□□□□□ -1.11
VTI1BP3-201ENST00000550220 CD74P04233 296 aa8.1□□□□□ -1.11
VTI1BP3-201ENST00000550220 CD3DP04234 171 aa8.1□□□□□ -1.11
VTI1BP3-201ENST00000550220 IGKV1D-39P04432 117 aa8.1□□□□□ -1.11
VTI1BP3-201ENST00000550220 ATF4P18848 351 aaPredicted RBP8.1□□□□□ -1.11
VTI1BP3-201ENST00000550220 MEF2DQ14814 521 aa8.1□□□□□ -1.11
VTI1BP3-201ENST00000550220 TRIM16LQ309B1 348 aa8.1□□□□□ -1.11
VTI1BP3-201ENST00000550220 GPR107Q5VW38 600 aa8.1□□□□□ -1.11
VTI1BP3-201ENST00000550220 FAM219AQ8IW50 185 aa8.1□□□□□ -1.11
VTI1BP3-201ENST00000550220 TMEM217Q8N7C4 229 aa8.1□□□□□ -1.11
VTI1BP3-201ENST00000550220 SLC35G3Q8N808 338 aa8.1□□□□□ -1.11
VTI1BP3-201ENST00000550220 OR52I2Q8NH67 350 aa8.1□□□□□ -1.11
VTI1BP3-201ENST00000550220 GALNT14Q96FL9 552 aa8.1□□□□□ -1.11
VTI1BP3-201ENST00000550220 ABHD1Q96SE0 405 aa8.1□□□□□ -1.11
VTI1BP3-201ENST00000550220 RHPN1-AS1Q9BWJ2 59 aa8.1□□□□□ -1.11
VTI1BP3-201ENST00000550220 SELENOKQ9Y6D0 94 aa8.1□□□□□ -1.11
VTI1BP3-201ENST00000550220 A0A0B4J293 547 aa8.09□□□□□ -1.11
VTI1BP3-201ENST00000550220 GABARAPH6UMI1 98 aa8.09□□□□□ -1.11
VTI1BP3-201ENST00000550220 CHEK1O14757 476 aa8.09□□□□□ -1.11
VTI1BP3-201ENST00000550220 RAB3DO95716 219 aa8.09□□□□□ -1.11
VTI1BP3-201ENST00000550220 CTSDP07339 412 aaPredicted RBP8.09□□□□□ -1.11
VTI1BP3-201ENST00000550220 SURF2Q15527 256 aaPredicted RBP8.09□□□□□ -1.11
VTI1BP3-201ENST00000550220 GPR141Q7Z602 305 aa8.09□□□□□ -1.11
VTI1BP3-201ENST00000550220 PINX1Q96BK5 328 aaKnown RBP8.09□□□□□ -1.11
VTI1BP3-201ENST00000550220 MRPS26Q9BYN8 205 aaKnown RBP8.09□□□□□ -1.11
VTI1BP3-201ENST00000550220 TMEM231Q9H6L2 316 aa8.09□□□□□ -1.11
VTI1BP3-201ENST00000550220 DYNC2H1Q8NCM8 4307 aaKnown RBP8.09□□□□□ -1.11
VTI1BP3-201ENST00000550220 DISC1C4P0D8 188 aa8.08□□□□□ -1.12
VTI1BP3-201ENST00000550220 RGS5O15539 181 aa8.08□□□□□ -1.12
VTI1BP3-201ENST00000550220 ZNF207O43670 478 aaKnown RBP8.08□□□□□ -1.12
VTI1BP3-201ENST00000550220 UCP1P25874 307 aa8.08□□□□□ -1.12
VTI1BP3-201ENST00000550220 RPL5P46777 297 aaKnown RBP8.08□□□□□ -1.12
VTI1BP3-201ENST00000550220 DHODHQ02127 395 aa8.08□□□□□ -1.12
VTI1BP3-201ENST00000550220 TNFRSF9Q07011 255 aa8.08□□□□□ -1.12
VTI1BP3-201ENST00000550220 ODF3L2Q3SX64 289 aa8.08□□□□□ -1.12
VTI1BP3-201ENST00000550220 SCGB2B2Q4G0G5 96 aa8.08□□□□□ -1.12
VTI1BP3-201ENST00000550220 PVRIGQ6DKI7 326 aa8.08□□□□□ -1.12
VTI1BP3-201ENST00000550220 STEAP1BQ6NZ63 245 aa8.08□□□□□ -1.12
VTI1BP3-201ENST00000550220 ZNF600Q6ZNG1 722 aa8.08□□□□□ -1.12
VTI1BP3-201ENST00000550220 OR52E5Q8NH55 327 aa8.08□□□□□ -1.12
VTI1BP3-201ENST00000550220 RNASE11Q8TAA1 199 aaKnown RBP8.08□□□□□ -1.12
VTI1BP3-201ENST00000550220 RNF183Q96D59 192 aa8.08□□□□□ -1.12
VTI1BP3-201ENST00000550220 TP53RKQ96S44 253 aa8.08□□□□□ -1.12
VTI1BP3-201ENST00000550220 RNF2Q99496 336 aa8.08□□□□□ -1.12
VTI1BP3-201ENST00000550220 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.08□□□□□ -1.12
VTI1BP3-201ENST00000550220 UBQLN2Q9UHD9 624 aa8.08□□□□□ -1.12
VTI1BP3-201ENST00000550220 C14orf166Q9Y224 244 aaKnown RBP8.08□□□□□ -1.12
VTI1BP3-201ENST00000550220 IGHV3OR16-8A0A075B7F1 116 aa8.07□□□□□ -1.12
VTI1BP3-201ENST00000550220 TRAV30A0A087WSZ9 112 aa8.07□□□□□ -1.12
VTI1BP3-201ENST00000550220 TRAV2A0A0B4J234 112 aa8.07□□□□□ -1.12
VTI1BP3-201ENST00000550220 A0A1W2PS18 150 aa8.07□□□□□ -1.12
VTI1BP3-201ENST00000550220 ST8SIA3O43173 380 aa8.07□□□□□ -1.12
VTI1BP3-201ENST00000550220 DFFBO76075 338 aa8.07□□□□□ -1.12
VTI1BP3-201ENST00000550220 CDS2O95674 445 aa8.07□□□□□ -1.12
VTI1BP3-201ENST00000550220 TMEM50AO95807 157 aa8.07□□□□□ -1.12
VTI1BP3-201ENST00000550220 IGKV1-5P01602 117 aa8.07□□□□□ -1.12
VTI1BP3-201ENST00000550220 P0C879 139 aa8.07□□□□□ -1.12
VTI1BP3-201ENST00000550220 SMIM18P0DKX4 95 aa8.07□□□□□ -1.12
VTI1BP3-201ENST00000550220 PI3P19957 117 aa8.07□□□□□ -1.12
VTI1BP3-201ENST00000550220 ETV6P41212 452 aa8.07□□□□□ -1.12
VTI1BP3-201ENST00000550220 HOXA1P49639 335 aaPredicted RBP8.07□□□□□ -1.12
VTI1BP3-201ENST00000550220 SPCS3P61009 180 aa8.07□□□□□ -1.12
VTI1BP3-201ENST00000550220 RNASE12Q5GAN4 147 aaKnown RBP8.07□□□□□ -1.12
VTI1BP3-201ENST00000550220 TOMM20LQ6UXN7 152 aa8.07□□□□□ -1.12
VTI1BP3-201ENST00000550220 OR13C8Q8NGS7 320 aa8.07□□□□□ -1.12
VTI1BP3-201ENST00000550220 SCGB3A2Q96PL1 93 aa8.07□□□□□ -1.12
VTI1BP3-201ENST00000550220 PRRT1Q99946 306 aa8.07□□□□□ -1.12
VTI1BP3-201ENST00000550220 BCL7BQ9BQE9 202 aa8.07□□□□□ -1.12
VTI1BP3-201ENST00000550220 NAA50Q9GZZ1 169 aaKnown RBP8.07□□□□□ -1.12
VTI1BP3-201ENST00000550220 TMEM222Q9H0R3 208 aa8.07□□□□□ -1.12
VTI1BP3-201ENST00000550220 MAP6D1Q9H9H5 199 aa8.07□□□□□ -1.12
VTI1BP3-201ENST00000550220 CSMD3Q7Z407 3707 aa8.06□□□□□ -1.12
VTI1BP3-201ENST00000550220 PIGBOS1A0A0B4J2F0 54 aa8.06□□□□□ -1.12
VTI1BP3-201ENST00000550220 TEX13DA0A0J9YY54 714 aaPredicted RBP8.06□□□□□ -1.12
VTI1BP3-201ENST00000550220 RPS10-NUDT3A0A1W2PQS6 291 aa8.06□□□□□ -1.12
VTI1BP3-201ENST00000550220 DNASE2O00115 360 aaPredicted RBP8.06□□□□□ -1.12
VTI1BP3-201ENST00000550220 CTDSPLO15194 276 aa8.06□□□□□ -1.12
VTI1BP3-201ENST00000550220 NPPCP23582 126 aa8.06□□□□□ -1.12
VTI1BP3-201ENST00000550220 HTR2BP41595 481 aa8.06□□□□□ -1.12
VTI1BP3-201ENST00000550220 ALDH3B2P48448 385 aa8.06□□□□□ -1.12
VTI1BP3-201ENST00000550220 PPP5CP53041 499 aa8.06□□□□□ -1.12
VTI1BP3-201ENST00000550220 AARDQ4LEZ3 155 aa8.06□□□□□ -1.12
VTI1BP3-201ENST00000550220 FAM90A2PQ658T7 463 aa8.06□□□□□ -1.12
VTI1BP3-201ENST00000550220 NOXA1Q86UR1 476 aa8.06□□□□□ -1.12
VTI1BP3-201ENST00000550220 OR4X1Q8NH49 305 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms