RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 TRIQKQ629K1 86 aa1.85□□□□□ -2.11
SNRPF-202ENST00000549580 BPIFA4PQ86YQ2 179 aa1.85□□□□□ -2.11
SNRPF-202ENST00000549580 OR13C6PQ8NH95 151 aa1.85□□□□□ -2.11
SNRPF-202ENST00000549580 DNAJC9Q8WXX5 260 aa1.85□□□□□ -2.11
SNRPF-202ENST00000549580 SCGB3A1Q96QR1 104 aa1.85□□□□□ -2.11
SNRPF-202ENST00000549580 DOHHQ9BU89 302 aa1.85□□□□□ -2.11
SNRPF-202ENST00000549580 PRO2289Q9P1D8 64 aa1.85□□□□□ -2.11
SNRPF-202ENST00000549580 RPL26L1Q9UNX3 145 aaKnown RBP1.85□□□□□ -2.11
SNRPF-202ENST00000549580 UTP11Q9Y3A2 253 aaKnown RBP1.85□□□□□ -2.11
SNRPF-202ENST00000549580 NEO1Q92859 1461 aa1.85□□□□□ -2.11
SNRPF-202ENST00000549580 ARHGAP32A7KAX9 2087 aa1.85□□□□□ -2.11
SNRPF-202ENST00000549580 WDR90Q96KV7 1748 aa1.85□□□□□ -2.11
SNRPF-202ENST00000549580 ADGRB3O60242 1522 aa1.85□□□□□ -2.11
SNRPF-202ENST00000549580 MYO9BQ13459 2157 aa1.85□□□□□ -2.11
SNRPF-202ENST00000549580 CACNA1GO43497 2377 aa1.84□□□□□ -2.11
SNRPF-202ENST00000549580 TMSB15BA0A087X1C1 80 aa1.84□□□□□ -2.11
SNRPF-202ENST00000549580 TRBV10-2A0A0K0K1G8 114 aa1.84□□□□□ -2.11
SNRPF-202ENST00000549580 ARRDC5A6NEK1 342 aa1.84□□□□□ -2.11
SNRPF-202ENST00000549580 BUB1B-PAK6H3BSN5 160 aa1.84□□□□□ -2.11
SNRPF-202ENST00000549580 CIAO1O76071 339 aa1.84□□□□□ -2.11
SNRPF-202ENST00000549580 S1PR2O95136 353 aa1.84□□□□□ -2.11
SNRPF-202ENST00000549580 FABP1P07148 127 aa1.84□□□□□ -2.11
SNRPF-202ENST00000549580 DEFA4P12838 97 aa1.84□□□□□ -2.11
SNRPF-202ENST00000549580 G6PCP35575 357 aa1.84□□□□□ -2.11
SNRPF-202ENST00000549580 ZNF80P51504 273 aaPredicted RBP1.84□□□□□ -2.11
SNRPF-202ENST00000549580 FXYD2P54710 66 aa1.84□□□□□ -2.11
SNRPF-202ENST00000549580 DEFA3P59666 94 aa1.84□□□□□ -2.11
SNRPF-202ENST00000549580 KISS1Q15726 138 aa1.84□□□□□ -2.11
SNRPF-202ENST00000549580 ZNF791Q3KP31 576 aaPredicted RBP1.84□□□□□ -2.11
SNRPF-202ENST00000549580 LYRM7Q5U5X0 104 aa1.84□□□□□ -2.11
SNRPF-202ENST00000549580 Q6ZTI0 123 aa1.84□□□□□ -2.11
SNRPF-202ENST00000549580 MIR17HGQ75NE6 70 aa1.84□□□□□ -2.11
SNRPF-202ENST00000549580 KTN1-AS1Q86SY8 53 aa1.84□□□□□ -2.11
SNRPF-202ENST00000549580 TRAPPC6BQ86SZ2 158 aa1.84□□□□□ -2.11
SNRPF-202ENST00000549580 TERB2Q8NHR7 220 aa1.84□□□□□ -2.11
SNRPF-202ENST00000549580 FAM172AQ8WUF8 416 aa1.84□□□□□ -2.11
SNRPF-202ENST00000549580 C11orf40Q8WZ69 217 aa1.84□□□□□ -2.11
SNRPF-202ENST00000549580 ANP32BQ92688 251 aaKnown RBP1.84□□□□□ -2.11
SNRPF-202ENST00000549580 TMEM106AQ96A25 262 aa1.84□□□□□ -2.11
SNRPF-202ENST00000549580 HOPXQ9BPY8 73 aaPredicted RBP1.84□□□□□ -2.11
SNRPF-202ENST00000549580 GINS4Q9BRT9 223 aa1.84□□□□□ -2.11
SNRPF-202ENST00000549580 VCX3BQ9H321 246 aa1.84□□□□□ -2.11
SNRPF-202ENST00000549580 ERGIC3Q9Y282 383 aa1.84□□□□□ -2.11
SNRPF-202ENST00000549580 KDM5BQ9UGL1 1544 aa1.84□□□□□ -2.11
SNRPF-202ENST00000549580 ROCK1Q13464 1354 aa1.84□□□□□ -2.12
SNRPF-202ENST00000549580 HECW1Q76N89 1606 aa1.84□□□□□ -2.12
SNRPF-202ENST00000549580 TRBV19A0A075B6N1 114 aa1.83□□□□□ -2.12
SNRPF-202ENST00000549580 TRAV4A0A0B4J268 109 aa1.83□□□□□ -2.12
SNRPF-202ENST00000549580 SIGLEC16A6NMB1 481 aa1.83□□□□□ -2.12
SNRPF-202ENST00000549580 G3V2T6 193 aa1.83□□□□□ -2.12
SNRPF-202ENST00000549580 OR2J2O76002 312 aa1.83□□□□□ -2.12
SNRPF-202ENST00000549580 IFNA7P01567 189 aa1.83□□□□□ -2.12
SNRPF-202ENST00000549580 C1QBP02746 253 aa1.83□□□□□ -2.12
SNRPF-202ENST00000549580 OR4E1P0C645 316 aa1.83□□□□□ -2.12
SNRPF-202ENST00000549580 PEBP1P30086 187 aaKnown RBP1.83□□□□□ -2.12
SNRPF-202ENST00000549580 TAS2R41P59536 307 aa1.83□□□□□ -2.12
SNRPF-202ENST00000549580 CDC42P60953 191 aa1.83□□□□□ -2.12
SNRPF-202ENST00000549580 YPEL3P61236 119 aaPredicted RBP1.83□□□□□ -2.12
SNRPF-202ENST00000549580 B2MP61769 119 aa1.83□□□□□ -2.12
SNRPF-202ENST00000549580 SUPT4H1P63272 117 aaKnown RBP1.83□□□□□ -2.12
SNRPF-202ENST00000549580 RELAQ04206 551 aa1.83□□□□□ -2.12
SNRPF-202ENST00000549580 HES1Q14469 280 aa1.83□□□□□ -2.12
SNRPF-202ENST00000549580 NDUFA5Q16718 116 aa1.83□□□□□ -2.12
SNRPF-202ENST00000549580 AKR1C8PQ5T2L2 129 aa1.83□□□□□ -2.12
SNRPF-202ENST00000549580 FAM27BQ5VT28 67 aa1.83□□□□□ -2.12
SNRPF-202ENST00000549580 CLVS1Q8IUQ0 354 aaPredicted RBP1.83□□□□□ -2.12
SNRPF-202ENST00000549580 TMEM86AQ8N2M4 240 aa1.83□□□□□ -2.12
SNRPF-202ENST00000549580 Q8NDZ9 215 aa1.83□□□□□ -2.12
SNRPF-202ENST00000549580 RNF122Q9H9V4 155 aa1.83□□□□□ -2.12
SNRPF-202ENST00000549580 UNC13AQ9UPW8 1703 aa1.83□□□□□ -2.12
SNRPF-202ENST00000549580 A0A0D9SEW6 157 aa1.82□□□□□ -2.12
SNRPF-202ENST00000549580 HMSDA8MTL9 139 aa1.82□□□□□ -2.12
SNRPF-202ENST00000549580 CLDN25C9JDP6 229 aa1.82□□□□□ -2.12
SNRPF-202ENST00000549580 TRAPPC2LH3BP13 241 aa1.82□□□□□ -2.12
SNRPF-202ENST00000549580 AIPO00170 330 aa1.82□□□□□ -2.12
SNRPF-202ENST00000549580 NDUFC2O95298 119 aa1.82□□□□□ -2.12
SNRPF-202ENST00000549580 ATP5G3P48201 142 aa1.82□□□□□ -2.12
SNRPF-202ENST00000549580 PIGPP57054 158 aa1.82□□□□□ -2.12
SNRPF-202ENST00000549580 TCTAP57738 103 aa1.82□□□□□ -2.12
SNRPF-202ENST00000549580 NCALDP61601 193 aa1.82□□□□□ -2.12
SNRPF-202ENST00000549580 RHOBP62745 196 aa1.82□□□□□ -2.12
SNRPF-202ENST00000549580 LCA10Q71F78 164 aa1.82□□□□□ -2.12
SNRPF-202ENST00000549580 LRRC28Q86X40 367 aaPredicted RBP1.82□□□□□ -2.12
SNRPF-202ENST00000549580 HIST3H2BBQ8N257 126 aa1.82□□□□□ -2.12
SNRPF-202ENST00000549580 IMUPQ9GZP8 106 aa1.82□□□□□ -2.12
SNRPF-202ENST00000549580 BOLA2Q9H3K6 86 aa1.82□□□□□ -2.12
SNRPF-202ENST00000549580 TRABDQ9H4I3 376 aa1.82□□□□□ -2.12
SNRPF-202ENST00000549580 PRNDQ9UKY0 176 aa1.82□□□□□ -2.12
SNRPF-202ENST00000549580 SCN10AQ9Y5Y9 1956 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 DOCK3Q8IZD9 2030 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 IGLV3-9A0A075B6K5 115 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 A0A0G2JQZ4 141 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 A0A1B0GVG6 124 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 MEIS3P1A6NDR6 274 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 OR51F1A6NGY5 319 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 H3BRN7 92 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 C19orf84I3L1E1 186 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 PGRMC1O00264 195 aaKnown RBP1.81□□□□□ -2.12
SNRPF-202ENST00000549580 CYB5BO43169 146 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 METTL15P1P0C7V9 234 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms