RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 RNF114Q9Y508 228 aa9.09□□□□□ -0.95
LINC00661-204ENST00000549354 TIMM9Q9Y5J7 89 aa9.09□□□□□ -0.95
LINC00661-204ENST00000549354 S4R3C0 116 aa9.09□□□□□ -0.95
LINC00661-204ENST00000549354 FAM90A26D6RGX4 464 aa9.09□□□□□ -0.95
LINC00661-204ENST00000549354 GATA4P43694 442 aa9.09□□□□□ -0.95
LINC00661-204ENST00000549354 CAMPP49913 170 aa9.09□□□□□ -0.95
LINC00661-204ENST00000549354 KLF3P57682 345 aaPredicted RBP9.09□□□□□ -0.95
LINC00661-204ENST00000549354 SLC35E4Q6ICL7 350 aa9.09□□□□□ -0.95
LINC00661-204ENST00000549354 WFDC8Q8IUA0 241 aa9.09□□□□□ -0.95
LINC00661-204ENST00000549354 K7EN84 100 aa9.08□□□□□ -0.96
LINC00661-204ENST00000549354 HTD2P86397 168 aa9.08□□□□□ -0.96
LINC00661-204ENST00000549354 SMIM21Q3B7S5 101 aa9.08□□□□□ -0.96
LINC00661-204ENST00000549354 COA6Q5JTJ3 125 aaKnown RBP9.08□□□□□ -0.96
LINC00661-204ENST00000549354 Q8N7P7 452 aa9.08□□□□□ -0.96
LINC00661-204ENST00000549354 Q8TCH9 128 aa9.08□□□□□ -0.96
LINC00661-204ENST00000549354 CIB3Q96Q77 187 aaPredicted RBP9.08□□□□□ -0.96
LINC00661-204ENST00000549354 NAT8BQ9UHF3 227 aa9.08□□□□□ -0.96
LINC00661-204ENST00000549354 TP53TG3Q9ULZ0 132 aa9.08□□□□□ -0.96
LINC00661-204ENST00000549354 LHBP01229 141 aa9.08□□□□□ -0.96
LINC00661-204ENST00000549354 THBDP07204 575 aa9.08□□□□□ -0.96
LINC00661-204ENST00000549354 CCL3L1P16619 93 aa9.08□□□□□ -0.96
LINC00661-204ENST00000549354 Q6ZVH6 145 aa9.08□□□□□ -0.96
LINC00661-204ENST00000549354 ZCCHC14Q8WYQ9 949 aaKnown RBP9.08□□□□□ -0.96
LINC00661-204ENST00000549354 MCRIP2Q9BUT9 160 aaKnown RBP9.08□□□□□ -0.96
LINC00661-204ENST00000549354 WNT10AQ9GZT5 417 aa9.08□□□□□ -0.96
LINC00661-204ENST00000549354 SRRM5B3KS81 715 aa9.08□□□□□ -0.96
LINC00661-204ENST00000549354 PDE6DO43924 150 aa9.08□□□□□ -0.96
LINC00661-204ENST00000549354 OR10J1P30954 320 aa9.08□□□□□ -0.96
LINC00661-204ENST00000549354 BPIFB3P59826 476 aa9.08□□□□□ -0.96
LINC00661-204ENST00000549354 LEMD1Q68G75 181 aa9.08□□□□□ -0.96
LINC00661-204ENST00000549354 HCP5Q6MZN7 132 aa9.08□□□□□ -0.96
LINC00661-204ENST00000549354 PQLC2Q6ZP29 291 aa9.08□□□□□ -0.96
LINC00661-204ENST00000549354 TMEM106BQ9NUM4 274 aa9.08□□□□□ -0.96
LINC00661-204ENST00000549354 WDR83OSQ9Y284 106 aa9.08□□□□□ -0.96
LINC00661-204ENST00000549354 RAB29O14966 203 aa9.07□□□□□ -0.96
LINC00661-204ENST00000549354 GPR6P46095 362 aaPredicted RBP9.07□□□□□ -0.96
LINC00661-204ENST00000549354 PDLIM4P50479 330 aa9.07□□□□□ -0.96
LINC00661-204ENST00000549354 DIAPH2-AS1Q14236 149 aa9.07□□□□□ -0.96
LINC00661-204ENST00000549354 OR9G1Q8NH87 305 aa9.07□□□□□ -0.96
LINC00661-204ENST00000549354 DIRC2Q96SL1 478 aa9.07□□□□□ -0.96
LINC00661-204ENST00000549354 GGTLC1Q9BX51 225 aa9.07□□□□□ -0.96
LINC00661-204ENST00000549354 GSX1Q9H4S2 264 aaPredicted RBP9.07□□□□□ -0.96
LINC00661-204ENST00000549354 TP73-AS1Q9UF72 201 aa9.07□□□□□ -0.96
LINC00661-204ENST00000549354 CSMD2Q7Z408 3487 aa9.07□□□□□ -0.96
LINC00661-204ENST00000549354 IGKV1D-17A0A075B6S4 117 aa9.07□□□□□ -0.96
LINC00661-204ENST00000549354 PIGBOS1A0A0B4J2F0 54 aa9.07□□□□□ -0.96
LINC00661-204ENST00000549354 VENTXO95231 258 aa9.07□□□□□ -0.96
LINC00661-204ENST00000549354 CA2P00918 260 aa9.07□□□□□ -0.96
LINC00661-204ENST00000549354 ADH4P08319 380 aa9.07□□□□□ -0.96
LINC00661-204ENST00000549354 OR5G3P0C626 314 aa9.07□□□□□ -0.96
LINC00661-204ENST00000549354 CHRNB4P30926 498 aa9.07□□□□□ -0.96
LINC00661-204ENST00000549354 KLRB1Q12918 225 aa9.07□□□□□ -0.96
LINC00661-204ENST00000549354 C1orf194Q5T5A4 169 aa9.07□□□□□ -0.96
LINC00661-204ENST00000549354 TMEM108Q6UXF1 575 aa9.07□□□□□ -0.96
LINC00661-204ENST00000549354 STPG3Q8N7X2 389 aa9.07□□□□□ -0.96
LINC00661-204ENST00000549354 OR2T6Q8NHC8 308 aa9.07□□□□□ -0.96
LINC00661-204ENST00000549354 AMTP48728 403 aa9.06□□□□□ -0.96
LINC00661-204ENST00000549354 CENPVQ7Z7K6 275 aaPredicted RBP9.06□□□□□ -0.96
LINC00661-204ENST00000549354 VAMP8Q9BV40 100 aa9.06□□□□□ -0.96
LINC00661-204ENST00000549354 TPPP3Q9BW30 176 aa9.06□□□□□ -0.96
LINC00661-204ENST00000549354 TCF19Q9Y242 345 aa9.06□□□□□ -0.96
LINC00661-204ENST00000549354 CRYBG3Q68DQ2 2970 aa9.06□□□□□ -0.96
LINC00661-204ENST00000549354 LYNX1G3V0Z9 82 aa9.06□□□□□ -0.96
LINC00661-204ENST00000549354 LYNX1P0DP58 116 aa9.06□□□□□ -0.96
LINC00661-204ENST00000549354 DUTP33316 252 aaKnown RBP9.06□□□□□ -0.96
LINC00661-204ENST00000549354 LINC00310P59036 64 aa9.06□□□□□ -0.96
LINC00661-204ENST00000549354 MMD2Q8IY49 270 aa9.06□□□□□ -0.96
LINC00661-204ENST00000549354 BEND2Q8NDZ0 799 aa9.06□□□□□ -0.96
LINC00661-204ENST00000549354 OR5AU1Q8NGC0 362 aa9.06□□□□□ -0.96
LINC00661-204ENST00000549354 FAM222BQ8WU58 562 aa9.06□□□□□ -0.96
LINC00661-204ENST00000549354 TMEM208Q9BTX3 173 aa9.06□□□□□ -0.96
LINC00661-204ENST00000549354 SONP18583 2426 aaKnown RBP9.06□□□□□ -0.96
LINC00661-204ENST00000549354 C2CD3Q4AC94 2353 aa9.06□□□□□ -0.96
LINC00661-204ENST00000549354 ACACBO00763 2458 aa9.06□□□□□ -0.96
LINC00661-204ENST00000549354 DPRXA6NFQ7 191 aa9.06□□□□□ -0.96
LINC00661-204ENST00000549354 IL6RP08887 468 aaPredicted RBP9.06□□□□□ -0.96
LINC00661-204ENST00000549354 P0C879 139 aa9.06□□□□□ -0.96
LINC00661-204ENST00000549354 ORM2P19652 201 aa9.06□□□□□ -0.96
LINC00661-204ENST00000549354 TPPP2P59282 170 aa9.06□□□□□ -0.96
LINC00661-204ENST00000549354 LCN2P80188 198 aa9.06□□□□□ -0.96
LINC00661-204ENST00000549354 MRPS11P82912 194 aaKnown RBP9.06□□□□□ -0.96
LINC00661-204ENST00000549354 EFNB3Q15768 340 aa9.06□□□□□ -0.96
LINC00661-204ENST00000549354 SSBP4Q9BWG4 385 aaPredicted RBP9.06□□□□□ -0.96
LINC00661-204ENST00000549354 KCNIP2Q9NS61 270 aa9.06□□□□□ -0.96
LINC00661-204ENST00000549354 MYO9AB2RTY4 2548 aa9.05□□□□□ -0.96
LINC00661-204ENST00000549354 M0QZ24 198 aa9.05□□□□□ -0.96
LINC00661-204ENST00000549354 PYYP10082 97 aa9.05□□□□□ -0.96
LINC00661-204ENST00000549354 PAX1P15863 534 aa9.05□□□□□ -0.96
LINC00661-204ENST00000549354 GCHFRP30047 84 aa9.05□□□□□ -0.96
LINC00661-204ENST00000549354 MMDQ15546 238 aa9.05□□□□□ -0.96
LINC00661-204ENST00000549354 CR1LQ2VPA4 569 aa9.05□□□□□ -0.96
LINC00661-204ENST00000549354 FBXL19-AS1Q494R0 122 aa9.05□□□□□ -0.96
LINC00661-204ENST00000549354 ARSJQ5FYB0 599 aaPredicted RBP9.05□□□□□ -0.96
LINC00661-204ENST00000549354 DMRTA1Q5VZB9 504 aa9.05□□□□□ -0.96
LINC00661-204ENST00000549354 TMEM144Q7Z5S9 345 aa9.05□□□□□ -0.96
LINC00661-204ENST00000549354 RCHY1Q96PM5 261 aa9.05□□□□□ -0.96
LINC00661-204ENST00000549354 NCOR1P1Q9H4R4 102 aa9.05□□□□□ -0.96
LINC00661-204ENST00000549354 IL19Q9UHD0 177 aa9.05□□□□□ -0.96
LINC00661-204ENST00000549354 IGHV3OR16-8A0A075B7F1 116 aa9.05□□□□□ -0.96
LINC00661-204ENST00000549354 MUC21A0A0G2JKD1 596 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms