RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 SPCS2Q15005 226 aa8.55□□□□□ -1.04
BEST3-209ENST00000548658 TRIM16LQ309B1 348 aa8.55□□□□□ -1.04
BEST3-209ENST00000548658 IL17DQ8TAD2 202 aa8.55□□□□□ -1.04
BEST3-209ENST00000548658 SMIM4Q8WVI0 70 aa8.55□□□□□ -1.04
BEST3-209ENST00000548658 MISP3Q96FF7 219 aa8.55□□□□□ -1.04
BEST3-209ENST00000548658 C20orf24Q9BUV8 137 aa8.55□□□□□ -1.04
BEST3-209ENST00000548658 MIXL1Q9H2W2 232 aa8.55□□□□□ -1.04
BEST3-209ENST00000548658 EDA2RQ9HAV5 297 aa8.55□□□□□ -1.04
BEST3-209ENST00000548658 CCDC59Q9P031 241 aaKnown RBP8.55□□□□□ -1.04
BEST3-209ENST00000548658 C14orf166Q9Y224 244 aaKnown RBP8.55□□□□□ -1.04
BEST3-209ENST00000548658 HUWE1Q7Z6Z7 4374 aaKnown RBP8.55□□□□□ -1.04
BEST3-209ENST00000548658 KMT2CQ8NEZ4 4911 aaKnown RBP8.55□□□□□ -1.04
BEST3-209ENST00000548658 I3L2K1 104 aa8.54□□□□□ -1.04
BEST3-209ENST00000548658 CORTO00230 105 aa8.54□□□□□ -1.04
BEST3-209ENST00000548658 TSPAN4O14817 238 aa8.54□□□□□ -1.04
BEST3-209ENST00000548658 IFNA17P01571 189 aa8.54□□□□□ -1.04
BEST3-209ENST00000548658 AKAIN1P0CW23 69 aa8.54□□□□□ -1.04
BEST3-209ENST00000548658 UCP1P25874 307 aa8.54□□□□□ -1.04
BEST3-209ENST00000548658 RPL5P46777 297 aaKnown RBP8.54□□□□□ -1.04
BEST3-209ENST00000548658 PPP5CP53041 499 aa8.54□□□□□ -1.04
BEST3-209ENST00000548658 IL18Q14116 193 aa8.54□□□□□ -1.04
BEST3-209ENST00000548658 FAM219AQ8IW50 185 aa8.54□□□□□ -1.04
BEST3-209ENST00000548658 SLC35G3Q8N808 338 aa8.54□□□□□ -1.04
BEST3-209ENST00000548658 OR4D10Q8NGI6 311 aa8.54□□□□□ -1.04
BEST3-209ENST00000548658 OR13C8Q8NGS7 320 aa8.54□□□□□ -1.04
BEST3-209ENST00000548658 RNASE11Q8TAA1 199 aaKnown RBP8.54□□□□□ -1.04
BEST3-209ENST00000548658 TP53RKQ96S44 253 aa8.54□□□□□ -1.04
BEST3-209ENST00000548658 PRRT1Q99946 306 aa8.54□□□□□ -1.04
BEST3-209ENST00000548658 CHRDL1Q9BU40 450 aa8.54□□□□□ -1.04
BEST3-209ENST00000548658 HIPK2Q9H2X6 1198 aa8.54□□□□□ -1.04
BEST3-209ENST00000548658 CACFD1Q9UGQ2 172 aa8.54□□□□□ -1.04
BEST3-209ENST00000548658 RSL24D1Q9UHA3 163 aaKnown RBP8.54□□□□□ -1.04
BEST3-209ENST00000548658 IGHV3-21A0A0B4J1V1 117 aa8.53□□□□□ -1.04
BEST3-209ENST00000548658 A0A0B4J293 547 aa8.53□□□□□ -1.04
BEST3-209ENST00000548658 TEX13DA0A0J9YY54 714 aaPredicted RBP8.53□□□□□ -1.04
BEST3-209ENST00000548658 RBMY1BA6NDE4 496 aaKnown RBP8.53□□□□□ -1.04
BEST3-209ENST00000548658 RBMY1EA6NEQ0 496 aaKnown RBP8.53□□□□□ -1.04
BEST3-209ENST00000548658 F8W735 103 aaPredicted RBP8.53□□□□□ -1.04
BEST3-209ENST00000548658 GNG7O60262 68 aa8.53□□□□□ -1.04
BEST3-209ENST00000548658 SCGB2A1O75556 95 aa8.53□□□□□ -1.04
BEST3-209ENST00000548658 CDS2O95674 445 aa8.53□□□□□ -1.04
BEST3-209ENST00000548658 MT-CO2P00403 227 aa8.53□□□□□ -1.04
BEST3-209ENST00000548658 IGKV1-5P01602 117 aa8.53□□□□□ -1.04
BEST3-209ENST00000548658 CD5P06127 495 aa8.53□□□□□ -1.04
BEST3-209ENST00000548658 RBMY1DP0C7P1 496 aaKnown RBP8.53□□□□□ -1.04
BEST3-209ENST00000548658 BMI1P35226 326 aa8.53□□□□□ -1.04
BEST3-209ENST00000548658 ADMP35318 185 aa8.53□□□□□ -1.04
BEST3-209ENST00000548658 NPBWR1P48145 328 aa8.53□□□□□ -1.04
BEST3-209ENST00000548658 CMC4P56277 68 aaPredicted RBP8.53□□□□□ -1.04
BEST3-209ENST00000548658 DHODHQ02127 395 aa8.53□□□□□ -1.04
BEST3-209ENST00000548658 DUSP18Q8NEJ0 188 aa8.53□□□□□ -1.04
BEST3-209ENST00000548658 MARCH1Q8TCQ1 289 aa8.53□□□□□ -1.04
BEST3-209ENST00000548658 DYNC2LI1Q8TCX1 351 aa8.53□□□□□ -1.04
BEST3-209ENST00000548658 PINX1Q96BK5 328 aaKnown RBP8.53□□□□□ -1.04
BEST3-209ENST00000548658 SCGB3A2Q96PL1 93 aa8.53□□□□□ -1.04
BEST3-209ENST00000548658 FAM110AQ9BQ89 295 aa8.53□□□□□ -1.04
BEST3-209ENST00000548658 ENY2Q9NPA8 101 aa8.53□□□□□ -1.04
BEST3-209ENST00000548658 LOC102724200A0A096LPH7 203 aaPredicted RBP8.52□□□□□ -1.05
BEST3-209ENST00000548658 TRAV14DV4A0A0A6YYC5 116 aa8.52□□□□□ -1.05
BEST3-209ENST00000548658 OR4C46A6NHA9 309 aa8.52□□□□□ -1.05
BEST3-209ENST00000548658 ST8SIA3O43173 380 aa8.52□□□□□ -1.05
BEST3-209ENST00000548658 YIF1AO95070 293 aa8.52□□□□□ -1.05
BEST3-209ENST00000548658 P0C879 139 aa8.52□□□□□ -1.05
BEST3-209ENST00000548658 SP6Q3SY56 376 aa8.52□□□□□ -1.05
BEST3-209ENST00000548658 OR10C1Q96KK4 312 aa8.52□□□□□ -1.05
BEST3-209ENST00000548658 GINS3Q9BRX5 216 aa8.52□□□□□ -1.05
BEST3-209ENST00000548658 GGTLC1Q9BX51 225 aa8.52□□□□□ -1.05
BEST3-209ENST00000548658 C6orf62Q9GZU0 229 aaPredicted RBP8.52□□□□□ -1.05
BEST3-209ENST00000548658 NXF2Q9GZY0 626 aaKnown RBP8.52□□□□□ -1.05
BEST3-209ENST00000548658 TMEM222Q9H0R3 208 aa8.52□□□□□ -1.05
BEST3-209ENST00000548658 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.52□□□□□ -1.05
BEST3-209ENST00000548658 SMPXQ9UHP9 88 aa8.52□□□□□ -1.05
BEST3-209ENST00000548658 SCP2D1Q9UJQ7 156 aa8.52□□□□□ -1.05
BEST3-209ENST00000548658 KCNIP3Q9Y2W7 256 aa8.52□□□□□ -1.05
BEST3-209ENST00000548658 NBEAL2Q6ZNJ1 2754 aa8.51□□□□□ -1.05
BEST3-209ENST00000548658 PIGBOS1A0A0B4J2F0 54 aa8.51□□□□□ -1.05
BEST3-209ENST00000548658 FABP12A6NFH5 140 aa8.51□□□□□ -1.05
BEST3-209ENST00000548658 GSTZ1O43708 216 aaPredicted RBP8.51□□□□□ -1.05
BEST3-209ENST00000548658 ETV6P41212 452 aa8.51□□□□□ -1.05
BEST3-209ENST00000548658 IZUMO4Q1ZYL8 232 aa8.51□□□□□ -1.05
BEST3-209ENST00000548658 TMEM116Q8NCL8 245 aa8.51□□□□□ -1.05
BEST3-209ENST00000548658 OR52E5Q8NH55 327 aa8.51□□□□□ -1.05
BEST3-209ENST00000548658 GLYATL2Q8WU03 294 aa8.51□□□□□ -1.05
BEST3-209ENST00000548658 RBPMSQ93062 196 aaKnown RBP8.51□□□□□ -1.05
BEST3-209ENST00000548658 RTBDNQ9BSG5 229 aaPredicted RBP8.51□□□□□ -1.05
BEST3-209ENST00000548658 WFDC10AQ9H1F0 79 aa8.51□□□□□ -1.05
BEST3-209ENST00000548658 NAA60Q9H7X0 242 aa8.51□□□□□ -1.05
BEST3-209ENST00000548658 GPR132Q9UNW8 380 aa8.51□□□□□ -1.05
BEST3-209ENST00000548658 SELENOKQ9Y6D0 94 aa8.51□□□□□ -1.05
BEST3-209ENST00000548658 IGHV7-4-1A0A0J9YVY3 117 aa8.5□□□□□ -1.05
BEST3-209ENST00000548658 OR5AC1P0C628 307 aa8.5□□□□□ -1.05
BEST3-209ENST00000548658 HOXA1P49639 335 aaPredicted RBP8.5□□□□□ -1.05
BEST3-209ENST00000548658 APOC4P55056 127 aa8.5□□□□□ -1.05
BEST3-209ENST00000548658 SPCS3P61009 180 aa8.5□□□□□ -1.05
BEST3-209ENST00000548658 PAFAH1B2P68402 229 aa8.5□□□□□ -1.05
BEST3-209ENST00000548658 AARDQ4LEZ3 155 aa8.5□□□□□ -1.05
BEST3-209ENST00000548658 PVRIGQ6DKI7 326 aa8.5□□□□□ -1.05
BEST3-209ENST00000548658 OR4C16Q8NGL9 310 aa8.5□□□□□ -1.05
BEST3-209ENST00000548658 RHPN1-AS1Q9BWJ2 59 aa8.5□□□□□ -1.05
BEST3-209ENST00000548658 SLIRPQ9GZT3 109 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms